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The map label for this gene is yobV [H]

Identifier: 108799593

GI number: 108799593

Start: 2784762

End: 2785454

Strand: Reverse

Name: yobV [H]

Synonym: Mmcs_2626

Alternate gene names: 108799593

Gene position: 2785454-2784762 (Counterclockwise)

Preceding gene: 108799594

Following gene: 108799591

Centisome position: 48.82

GC content: 67.97

Gene sequence:

>693_bases
ATGAGGAGAGCCGAGCGGTTGTACGCGCTGGTCGACCTGCTGCGGGGATCACGCCGGCCGTTGTCGGCCGCTCGGCTCGC
CGACGAGTTCGAGGTGTCGAAGCGCACGATCGAGCGTGACATCCAGTCCCTCCAACTCGCGGGGGTCCCGATCTATGCCG
ACCACGGGGTGTCAGGCGGATATTCGATCCTGCGGGAACACTCCCTGCCGCCGCTGAACCTCACGGTCCCGGAGTCGCTG
GCGGTGCTGGCGGGGCTTGGCTTGCTGGAGAACTCGCCGTATGGCGCGGCGGCGCGTCGGGCGCGGGCCAAGGTCGTGGC
GATCAGCCGCGAGGATCAACTCGCACCAGTCGATGAAGCGTTGGCGTCGATGTTCGTCATTGACTCCCAGGCGCCGTCGG
AGGCGGCGATCTCGCTCATTCCCGAGGCGATCGCCGCGCGTCGGGTCGTACGGCTGGACTACACCTCCGAGGACGGCGCG
ACCCACACCACCCGTGACGTGGAGGCGATGGGTCTGCTGCGCGGCGGCGATTCGTGGATGTTCGTGGGATGGTGTCGGCT
GCGCGAAGGCATCCGCGGATTTCACCTCGACCGGATCCGGCACCTGGAGATCACCGGCGAGGTGTTTCCCGAACGCGATT
CGGCGGTGCTCGATGCGGATCTGTCGCGGTGGCGCACTCGGCGGCTCGGGTGA

Upstream 100 bases:

>100_bases
CGATGTCTTCGACTTCACCGAGGATGGGCTGATCCGCGAGGTGTGGTCGGTGGGCGGGACACGCGCGCACCTCACCTGAG
ACCGGGGGAGACTCACATTC

Downstream 100 bases:

>100_bases
CGCCGCGTCCGGTCACAGCAACACGCCACCGGATACCTCGAGGCGTTCACCGGTTGCCCAGCGGAACTCACGGGACACGA
GGGCGCAGATCGCCTCGGCG

Product: helix-turn-helix, type 11

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 230; Mature: 230

Protein sequence:

>230_residues
MRRAERLYALVDLLRGSRRPLSAARLADEFEVSKRTIERDIQSLQLAGVPIYADHGVSGGYSILREHSLPPLNLTVPESL
AVLAGLGLLENSPYGAAARRARAKVVAISREDQLAPVDEALASMFVIDSQAPSEAAISLIPEAIAARRVVRLDYTSEDGA
THTTRDVEAMGLLRGGDSWMFVGWCRLREGIRGFHLDRIRHLEITGEVFPERDSAVLDADLSRWRTRRLG

Sequences:

>Translated_230_residues
MRRAERLYALVDLLRGSRRPLSAARLADEFEVSKRTIERDIQSLQLAGVPIYADHGVSGGYSILREHSLPPLNLTVPESL
AVLAGLGLLENSPYGAAARRARAKVVAISREDQLAPVDEALASMFVIDSQAPSEAAISLIPEAIAARRVVRLDYTSEDGA
THTTRDVEAMGLLRGGDSWMFVGWCRLREGIRGFHLDRIRHLEITGEVFPERDSAVLDADLSRWRTRRLG
>Mature_230_residues
MRRAERLYALVDLLRGSRRPLSAARLADEFEVSKRTIERDIQSLQLAGVPIYADHGVSGGYSILREHSLPPLNLTVPESL
AVLAGLGLLENSPYGAAARRARAKVVAISREDQLAPVDEALASMFVIDSQAPSEAAISLIPEAIAARRVVRLDYTSEDGA
THTTRDVEAMGLLRGGDSWMFVGWCRLREGIRGFHLDRIRHLEITGEVFPERDSAVLDADLSRWRTRRLG

Specific function: Unknown

COG id: COG2378

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH deoR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013196
- InterPro:   IPR001034
- InterPro:   IPR011991 [H]

Pfam domain/function: PF08279 HTH_11 [H]

EC number: NA

Molecular weight: Translated: 25423; Mature: 25423

Theoretical pI: Translated: 7.08; Mature: 7.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRAERLYALVDLLRGSRRPLSAARLADEFEVSKRTIERDIQSLQLAGVPIYADHGVSGG
CCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCC
YSILREHSLPPLNLTVPESLAVLAGLGLLENSPYGAAARRARAKVVAISREDQLAPVDEA
HHHHHHCCCCCCEEECCHHHHHHHHHHHHCCCCCCHHHHHHHEEEEEECCCCCCCCHHHH
LASMFVIDSQAPSEAAISLIPEAIAARRVVRLDYTSEDGATHTTRDVEAMGLLRGGDSWM
HHHHHHCCCCCCHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCHHHHHHHHEEECCCCEE
FVGWCRLREGIRGFHLDRIRHLEITGEVFPERDSAVLDADLSRWRTRRLG
EEEHHHHHHCCCCCCHHHEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRRAERLYALVDLLRGSRRPLSAARLADEFEVSKRTIERDIQSLQLAGVPIYADHGVSGG
CCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCC
YSILREHSLPPLNLTVPESLAVLAGLGLLENSPYGAAARRARAKVVAISREDQLAPVDEA
HHHHHHCCCCCCEEECCHHHHHHHHHHHHCCCCCCHHHHHHHEEEEEECCCCCCCCHHHH
LASMFVIDSQAPSEAAISLIPEAIAARRVVRLDYTSEDGATHTTRDVEAMGLLRGGDSWM
HHHHHHCCCCCCHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCHHHHHHHHEEECCCCEE
FVGWCRLREGIRGFHLDRIRHLEITGEVFPERDSAVLDADLSRWRTRRLG
EEEHHHHHHCCCCCCHHHEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]