| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
Click here to switch to the map view.
The map label for this gene is 108798119
Identifier: 108798119
GI number: 108798119
Start: 1246794
End: 1247903
Strand: Direct
Name: 108798119
Synonym: Mmcs_1147
Alternate gene names: NA
Gene position: 1246794-1247903 (Clockwise)
Preceding gene: 108798118
Following gene: 108798120
Centisome position: 21.85
GC content: 70.18
Gene sequence:
>1110_bases TTGATCGACAACGAGAACAGGCGACGTGGAAACGCCGGCTGGCTGGCCGGCGCCGCGGGACTGGCGGCGGTCGGCTCACT GGCCGGGGTGACCGTGGCCCGCTCGGTGGCGCGCCGCGTCACCGATGACGACCCCTATTCGGCCGAGGATTTCGAGCTGC TCGACGCCGACCGCAGCTCGGTCGTCACCACCACCGACGGTGTGCCGCTGGCCGTACGCGAGGTCGGCCCCGCCGACGCT CCGCTCACGGTCGTCTTCGCCCACGGCTTCTGTCTTCGCATGGGCGCCTTCCACTTCCAGCGCGCCCGCCTGTCGGAGCA GTGGGGTGACCAGGTCCGGATGGTGTTCTACGACCAACGCGGCCACGGCCAGTCCGGCGAGGCGCCCCCCGACACCTACA CCGTCACCCAGCTCGGCCAGGACCTCGAAGCGGTGCTGGCGGTGGTCGCCCCGCGCGGTCCGGTGGTGCTGGTCGGCCAC TCGATGGGCGGCATGACGGTGCTCTCGCACGCACGGCAGTACCCGCAGCGCTATCCCACCCGCGTCGTCGGTGCCGCGAT CATCTCCTCGGCCGCCGAGGGCGTATCCCGTTCACCGCTCGGTGAGATCCTGAAAAACCCTGCGCTGGAAGCGGTCCGAT TTGCGGCGCGCTACGCACCTGGCACCGTGCACCGCACCCGCGGGGTGGCCCGGGCGGTGATCGGCCCGATCCTGCGCGCG GCGTCCTACGGTGACGAGAAGATCAGCCCGAGCGTCGTCGCGTTCTCCGAGAAGATGATGCACGACACGCCGATTCCCAC ACTGGTCGAGTTCCTGCACGCGCTGGAGGTGCACGACGAGACGGGCGGCCTGACCACCCTGGCGAAGGTCCCGACGTTGA TCGCCTGCGGTGACCGTGATCTGCTCACCCCGATGGAGTACTCGCAGGAGATGGCCGCCGCGCTGCCCAAGTCCGAGCTC GTGATCGTCGACGGCGCCGGGCATCTGGTGCAGCTCGAGCATCCGGAGCAGATCGACGATGCGCTGGTCCGGCTGGTCGA GCGGGCCACACCGTCCAGACTCGTCGCACTGACGCGGCGGATCCGCGACCGGGCGCGGTCCCGTGACTGA
Upstream 100 bases:
>100_bases ACACCGCCCAGGACTGGGCCGAGATCATCGGCACCATCAACTACGAGATCGTCACCAGCCCCCGCGGCCGGGTCGTCCGC ACCTACCGACGGGAAAGCCG
Downstream 100 bases:
>100_bases CCGGCAGAGCGGCACCGCCGAACTGGCCACCGCGCAGGACACCATGGCGCTGGGCGCCCGGCTCGGCGCACACCTGCACG CCGGTGACGTCGTCGTGCTC
Product: alpha/beta hydrolase fold protein
Products: NA
Alternate protein names: Alpha/Beta Hydrolase Fold Protein; Alpha/Beta Hydrolase Fold; Lipase; Alpha/Beta Hydrolase; Alpha/Beta Fold Family Hydrolase; 3-Oxoadipate Enol-Lactonase; Hydrolase Or Acyltransferase Of Alpha/Beta Superfamily; Hydrolase Alpha/Beta Fold; Hydrolase Alpha/Beta Fold Family Protein; Thioesterase; B-Ketoadipate Enol-Lactone Hydrolase; Lysophospholipase; Alpha/Beta Hydrolase Fold Family Protein; Hydrolase Or Acyltransferase-Like Protein; Alpha/Beta Hydrolase Fold Family Hydrolase; Alpha/Beta Superfamily-Like Protein; Alpha/Beta Hydrolase Fold Containing Protein; Alpha/Beta Family Hydrolase; Non-Heme Haloperoxidase Hpx
Number of amino acids: Translated: 369; Mature: 369
Protein sequence:
>369_residues MIDNENRRRGNAGWLAGAAGLAAVGSLAGVTVARSVARRVTDDDPYSAEDFELLDADRSSVVTTTDGVPLAVREVGPADA PLTVVFAHGFCLRMGAFHFQRARLSEQWGDQVRMVFYDQRGHGQSGEAPPDTYTVTQLGQDLEAVLAVVAPRGPVVLVGH SMGGMTVLSHARQYPQRYPTRVVGAAIISSAAEGVSRSPLGEILKNPALEAVRFAARYAPGTVHRTRGVARAVIGPILRA ASYGDEKISPSVVAFSEKMMHDTPIPTLVEFLHALEVHDETGGLTTLAKVPTLIACGDRDLLTPMEYSQEMAAALPKSEL VIVDGAGHLVQLEHPEQIDDALVRLVERATPSRLVALTRRIRDRARSRD
Sequences:
>Translated_369_residues MIDNENRRRGNAGWLAGAAGLAAVGSLAGVTVARSVARRVTDDDPYSAEDFELLDADRSSVVTTTDGVPLAVREVGPADA PLTVVFAHGFCLRMGAFHFQRARLSEQWGDQVRMVFYDQRGHGQSGEAPPDTYTVTQLGQDLEAVLAVVAPRGPVVLVGH SMGGMTVLSHARQYPQRYPTRVVGAAIISSAAEGVSRSPLGEILKNPALEAVRFAARYAPGTVHRTRGVARAVIGPILRA ASYGDEKISPSVVAFSEKMMHDTPIPTLVEFLHALEVHDETGGLTTLAKVPTLIACGDRDLLTPMEYSQEMAAALPKSEL VIVDGAGHLVQLEHPEQIDDALVRLVERATPSRLVALTRRIRDRARSRD >Mature_369_residues MIDNENRRRGNAGWLAGAAGLAAVGSLAGVTVARSVARRVTDDDPYSAEDFELLDADRSSVVTTTDGVPLAVREVGPADA PLTVVFAHGFCLRMGAFHFQRARLSEQWGDQVRMVFYDQRGHGQSGEAPPDTYTVTQLGQDLEAVLAVVAPRGPVVLVGH SMGGMTVLSHARQYPQRYPTRVVGAAIISSAAEGVSRSPLGEILKNPALEAVRFAARYAPGTVHRTRGVARAVIGPILRA ASYGDEKISPSVVAFSEKMMHDTPIPTLVEFLHALEVHDETGGLTTLAKVPTLIACGDRDLLTPMEYSQEMAAALPKSEL VIVDGAGHLVQLEHPEQIDDALVRLVERATPSRLVALTRRIRDRARSRD
Specific function: Unknown
COG id: COG0596
COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39690; Mature: 39690
Theoretical pI: Translated: 6.59; Mature: 6.59
Prosite motif: PS00120 LIPASE_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIDNENRRRGNAGWLAGAAGLAAVGSLAGVTVARSVARRVTDDDPYSAEDFELLDADRSS CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCC VVTTTDGVPLAVREVGPADAPLTVVFAHGFCLRMGAFHFQRARLSEQWGDQVRMVFYDQR EEEECCCCCEEEECCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECC GHGQSGEAPPDTYTVTQLGQDLEAVLAVVAPRGPVVLVGHSMGGMTVLSHARQYPQRYPT CCCCCCCCCCCCEEHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHCCH RVVGAAIISSAAEGVSRSPLGEILKNPALEAVRFAARYAPGTVHRTRGVARAVIGPILRA HHHHHHHHHHHHHCCCCCHHHHHHHCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH ASYGDEKISPSVVAFSEKMMHDTPIPTLVEFLHALEVHDETGGLTTLAKVPTLIACGDRD HCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCEEHHHHCCEEEEECCCC LLTPMEYSQEMAAALPKSELVIVDGAGHLVQLEHPEQIDDALVRLVERATPSRLVALTRR CCCHHHHHHHHHHHCCCCCEEEEECCCCEEEECCCHHHHHHHHHHHHHCCHHHHHHHHHH IRDRARSRD HHHHHCCCC >Mature Secondary Structure MIDNENRRRGNAGWLAGAAGLAAVGSLAGVTVARSVARRVTDDDPYSAEDFELLDADRSS CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCC VVTTTDGVPLAVREVGPADAPLTVVFAHGFCLRMGAFHFQRARLSEQWGDQVRMVFYDQR EEEECCCCCEEEECCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECC GHGQSGEAPPDTYTVTQLGQDLEAVLAVVAPRGPVVLVGHSMGGMTVLSHARQYPQRYPT CCCCCCCCCCCCEEHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHCCH RVVGAAIISSAAEGVSRSPLGEILKNPALEAVRFAARYAPGTVHRTRGVARAVIGPILRA HHHHHHHHHHHHHCCCCCHHHHHHHCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH ASYGDEKISPSVVAFSEKMMHDTPIPTLVEFLHALEVHDETGGLTTLAKVPTLIACGDRD HCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCEEHHHHCCEEEEECCCC LLTPMEYSQEMAAALPKSELVIVDGAGHLVQLEHPEQIDDALVRLVERATPSRLVALTRR CCCHHHHHHHHHHHCCCCCEEEEECCCCEEEECCCHHHHHHHHHHHHHCCHHHHHHHHHH IRDRARSRD HHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA