| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
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The map label for this gene is yjeE [C]
Identifier: 108798120
GI number: 108798120
Start: 1247896
End: 1248363
Strand: Direct
Name: yjeE [C]
Synonym: Mmcs_1148
Alternate gene names: 108798120
Gene position: 1247896-1248363 (Clockwise)
Preceding gene: 108798119
Following gene: 108798121
Centisome position: 21.87
GC content: 70.51
Gene sequence:
>468_bases GTGACTGACCGGCAGAGCGGCACCGCCGAACTGGCCACCGCGCAGGACACCATGGCGCTGGGCGCCCGGCTCGGCGCACA CCTGCACGCCGGTGACGTCGTCGTGCTCTCCGGACCGCTCGGTGCGGGAAAGACAGTGCTGGCCAAGGGAATCGCCGAAG CGATGGACGTCGAGGGTCCGGTCACCTCGCCCACGTTCGTGCTCGCGCGAGTGCACCGCGCGCGGCAACCGGGCCGGCCG GCCATGGTCCACGTCGACATGTATCGGCTGCTCGACCACCCCGGCACCGACCTGCTCGCCGAACTCGACTCACTCGACCT CGACACCGATCTCGACGATGCCGTCGTCGTGGTCGAGTGGGGTGAGGGCGTCGCCGAGCGGCTCTCCGACAGCCACCTCG ACATCCGGCTGGAACGCGCCGTGGACACCGAGGCGCGCACCGCCATCTGGCAGTGGAGCCGACAGTGA
Upstream 100 bases:
>100_bases CCGGAGCAGATCGACGATGCGCTGGTCCGGCTGGTCGAGCGGGCCACACCGTCCAGACTCGTCGCACTGACGCGGCGGAT CCGCGACCGGGCGCGGTCCC
Downstream 100 bases:
>100_bases GCGCGCTCGTGCTGGCCATCGACACCGCCACCCCCGCCGTCACCGCCGGGGTGGTGCGCCGGGTCGACGACGGACTGAGC GTGCTCGCGGAGCGGGTGAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 155; Mature: 154
Protein sequence:
>155_residues MTDRQSGTAELATAQDTMALGARLGAHLHAGDVVVLSGPLGAGKTVLAKGIAEAMDVEGPVTSPTFVLARVHRARQPGRP AMVHVDMYRLLDHPGTDLLAELDSLDLDTDLDDAVVVVEWGEGVAERLSDSHLDIRLERAVDTEARTAIWQWSRQ
Sequences:
>Translated_155_residues MTDRQSGTAELATAQDTMALGARLGAHLHAGDVVVLSGPLGAGKTVLAKGIAEAMDVEGPVTSPTFVLARVHRARQPGRP AMVHVDMYRLLDHPGTDLLAELDSLDLDTDLDDAVVVVEWGEGVAERLSDSHLDIRLERAVDTEARTAIWQWSRQ >Mature_154_residues TDRQSGTAELATAQDTMALGARLGAHLHAGDVVVLSGPLGAGKTVLAKGIAEAMDVEGPVTSPTFVLARVHRARQPGRPA MVHVDMYRLLDHPGTDLLAELDSLDLDTDLDDAVVVVEWGEGVAERLSDSHLDIRLERAVDTEARTAIWQWSRQ
Specific function: Unknown
COG id: COG0802
COG function: function code R; Predicted ATPase or kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0079 family [H]
Homologues:
Organism=Escherichia coli, GI1790610, Length=140, Percent_Identity=31.4285714285714, Blast_Score=60, Evalue=9e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003442 [H]
Pfam domain/function: PF02367 UPF0079 [H]
EC number: NA
Molecular weight: Translated: 16684; Mature: 16553
Theoretical pI: Translated: 4.58; Mature: 4.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDRQSGTAELATAQDTMALGARLGAHLHAGDVVVLSGPLGAGKTVLAKGIAEAMDVEGP CCCCCCCCEEHHHHHHHHHHHHHHCCEECCCCEEEEECCCCCCHHHHHHHHHHHHCCCCC VTSPTFVLARVHRARQPGRPAMVHVDMYRLLDHPGTDLLAELDSLDLDTDLDDAVVVVEW CCCHHHHHHHHHHHCCCCCCEEEEHHHHHHHCCCCHHHHHHHHCCCCCCCCCCEEEEEEC GEGVAERLSDSHLDIRLERAVDTEARTAIWQWSRQ CCCHHHHCCCCCCEEEEECCCCCHHHHHHHHCCCC >Mature Secondary Structure TDRQSGTAELATAQDTMALGARLGAHLHAGDVVVLSGPLGAGKTVLAKGIAEAMDVEGP CCCCCCCEEHHHHHHHHHHHHHHCCEECCCCEEEEECCCCCCHHHHHHHHHHHHCCCCC VTSPTFVLARVHRARQPGRPAMVHVDMYRLLDHPGTDLLAELDSLDLDTDLDDAVVVVEW CCCHHHHHHHHHHHCCCCCCEEEEHHHHHHHCCCCHHHHHHHHCCCCCCCCCCEEEEEEC GEGVAERLSDSHLDIRLERAVDTEARTAIWQWSRQ CCCHHHHCCCCCCEEEEECCCCCHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP [C]
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]