| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108763528
Identifier: 108763528
GI number: 108763528
Start: 4979999
End: 4980937
Strand: Direct
Name: 108763528
Synonym: MXAN_4061
Alternate gene names: NA
Gene position: 4979999-4980937 (Clockwise)
Preceding gene: 108757028
Following gene: 108763744
Centisome position: 54.49
GC content: 58.79
Gene sequence:
>939_bases ATGCAAAAGTTGAGTCTGGCTGCGTGCGCGCTCGCGATGCTGATCGCCGCGTGTGGGGAGTCTTCGTCAACCGGGCCGTA CACACCGATTCGCGCGACCGAAGGAGTGATGCGTCTGCCATTGGTGTCGACCGCGCCCAATGGCGTCCAGTACCGGCTCG TGGGGGCGACCTTCGTCATCACTGGGACGGAGTCGCTCACGATCACGGATACGTCACCGGACACGCTGAAAGTGCCGTTG GTGCCCGGAACCTATTCCATCCAGCTCGAGGGTGATTGGCACGTCGAACGCGTGGGCACGCCATCCGAGATCGTGCCAGT GCAGCTGATTTCTCCCAACCCGATGGCGTTCTCCCTCGCGGAGCGGGACATGCGCGAAATTCGATTCCTGTTCAAGCTCC CCGCGGACGGCAACGCGAACGTGGGCATCACGGTCGATGAGGGTGGCTGGATAACAGGCACCATGCGATTCACTGATCAT TCGCCACGAGACCCGCCCAGTGAGTACGCCGAATTGGTCGGGCAGGAGGTGCCATTTACCATCAGCTTCGAATTCGCCTA CCTGAGTCGCAACTACTGGCGAGGACTCTCGGTGGCTACGAATGAGCTCGTCGTCCAGTTCGGGGGCCCCTACTCCGCGC TGCTGCATGATCATATTGCAAGATATCTAAGCGGTGACACAGCCAGATTCGAGTTGAACCGAGGCGAATCGAATCTCATC TACTTCGACAACTTCACGACGATGGGAATGAGCACTACAGGCAATACCCCGTACCATCTGCAAATGACTGGGCGACACCT GTTCCGAGGAGTCTTGGACTCCGAACAAATTCCTGTCAGCCAGCCGTTCCCTTTCACCGCGGAAGTCACTCTTCAGAGAT ACGACACCTCTGAAGGCATGCTCCGTGGAGTCGCGACTGGTACCGGCACTACCCAGTAG
Upstream 100 bases:
>100_bases ACCAGCGGTGAGGCGCCTGGAGTCAGGCTCCACCCATCTCTCCCCTGTTTGACAGTGTTACTCCGCCTCCGTAGGGTCGT GTCCGTCCCAAGGGGGAGTC
Downstream 100 bases:
>100_bases CTGAAGTCGAAGGGCACGTTTCCGGGCTCTGCGCCGCCGCATCGAGCAAGCCCCTGTGCTTGCGCCTTGACCTGAGTGCA TGGAGGGGCTGTTCTGACTC
Product: putative lipoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 312; Mature: 312
Protein sequence:
>312_residues MQKLSLAACALAMLIAACGESSSTGPYTPIRATEGVMRLPLVSTAPNGVQYRLVGATFVITGTESLTITDTSPDTLKVPL VPGTYSIQLEGDWHVERVGTPSEIVPVQLISPNPMAFSLAERDMREIRFLFKLPADGNANVGITVDEGGWITGTMRFTDH SPRDPPSEYAELVGQEVPFTISFEFAYLSRNYWRGLSVATNELVVQFGGPYSALLHDHIARYLSGDTARFELNRGESNLI YFDNFTTMGMSTTGNTPYHLQMTGRHLFRGVLDSEQIPVSQPFPFTAEVTLQRYDTSEGMLRGVATGTGTTQ
Sequences:
>Translated_312_residues MQKLSLAACALAMLIAACGESSSTGPYTPIRATEGVMRLPLVSTAPNGVQYRLVGATFVITGTESLTITDTSPDTLKVPL VPGTYSIQLEGDWHVERVGTPSEIVPVQLISPNPMAFSLAERDMREIRFLFKLPADGNANVGITVDEGGWITGTMRFTDH SPRDPPSEYAELVGQEVPFTISFEFAYLSRNYWRGLSVATNELVVQFGGPYSALLHDHIARYLSGDTARFELNRGESNLI YFDNFTTMGMSTTGNTPYHLQMTGRHLFRGVLDSEQIPVSQPFPFTAEVTLQRYDTSEGMLRGVATGTGTTQ >Mature_312_residues MQKLSLAACALAMLIAACGESSSTGPYTPIRATEGVMRLPLVSTAPNGVQYRLVGATFVITGTESLTITDTSPDTLKVPL VPGTYSIQLEGDWHVERVGTPSEIVPVQLISPNPMAFSLAERDMREIRFLFKLPADGNANVGITVDEGGWITGTMRFTDH SPRDPPSEYAELVGQEVPFTISFEFAYLSRNYWRGLSVATNELVVQFGGPYSALLHDHIARYLSGDTARFELNRGESNLI YFDNFTTMGMSTTGNTPYHLQMTGRHLFRGVLDSEQIPVSQPFPFTAEVTLQRYDTSEGMLRGVATGTGTTQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34132; Mature: 34132
Theoretical pI: Translated: 4.75; Mature: 4.75
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQKLSLAACALAMLIAACGESSSTGPYTPIRATEGVMRLPLVSTAPNGVQYRLVGATFVI CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCEEEEEEEEEEEE TGTESLTITDTSPDTLKVPLVPGTYSIQLEGDWHVERVGTPSEIVPVQLISPNPMAFSLA ECCCEEEEECCCCCEEEEEECCCEEEEEECCCEEEEECCCCCCEEEEEEECCCCCEEEHH ERDMREIRFLFKLPADGNANVGITVDEGGWITGTMRFTDHSPRDPPSEYAELVGQEVPFT HHHHHHEEEEEECCCCCCCEEEEEECCCCEEEEEEEECCCCCCCCHHHHHHHCCCCCCEE ISFEFAYLSRNYWRGLSVATNELVVQFGGPYSALLHDHIARYLSGDTARFELNRGESNLI EEEEEEEECCHHHCCCEEECEEEEEEECCCHHHHHHHHHHHHHCCCEEEEEEECCCCCEE YFDNFTTMGMSTTGNTPYHLQMTGRHLFRGVLDSEQIPVSQPFPFTAEVTLQRYDTSEGM EEECCEEEEEECCCCCCEEEEECCHHHHHHHCCCCCCCCCCCCCCEEEEEEEEECCCCCC LRGVATGTGTTQ EEEEECCCCCCC >Mature Secondary Structure MQKLSLAACALAMLIAACGESSSTGPYTPIRATEGVMRLPLVSTAPNGVQYRLVGATFVI CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCEEEEEEEEEEEE TGTESLTITDTSPDTLKVPLVPGTYSIQLEGDWHVERVGTPSEIVPVQLISPNPMAFSLA ECCCEEEEECCCCCEEEEEECCCEEEEEECCCEEEEECCCCCCEEEEEEECCCCCEEEHH ERDMREIRFLFKLPADGNANVGITVDEGGWITGTMRFTDHSPRDPPSEYAELVGQEVPFT HHHHHHEEEEEECCCCCCCEEEEEECCCCEEEEEEEECCCCCCCCHHHHHHHCCCCCCEE ISFEFAYLSRNYWRGLSVATNELVVQFGGPYSALLHDHIARYLSGDTARFELNRGESNLI EEEEEEEECCHHHCCCEEECEEEEEEECCCHHHHHHHHHHHHHCCCEEEEEEECCCCCEE YFDNFTTMGMSTTGNTPYHLQMTGRHLFRGVLDSEQIPVSQPFPFTAEVTLQRYDTSEGM EEECCEEEEEECCCCCCEEEEECCHHHHHHHCCCCCCCCCCCCCCEEEEEEEEECCCCCC LRGVATGTGTTQ EEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA