| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108763744
Identifier: 108763744
GI number: 108763744
Start: 4980997
End: 4982871
Strand: Direct
Name: 108763744
Synonym: MXAN_4062
Alternate gene names: NA
Gene position: 4980997-4982871 (Clockwise)
Preceding gene: 108763528
Following gene: 108761086
Centisome position: 54.5
GC content: 66.13
Gene sequence:
>1875_bases TTGCGCCTTGACCTGAGTGCATGGAGGGGCTGTTCTGACTCCATGCACTCGGGAACCCTGCGACTCGCTGGACTGTTTCT CATCATGGCGGCCTGCGCCACCCGTCCCACGCCCGTCATTCCCGCTCCTTCCTCGATCCCCGTCGTAGTGACGGCTCCCA AGCCGCTCCTCACGGTGTTCCGCCTCGAACCGGATGGGACAAGCGCTGAGTTCGGGCAGTTGCCACCAGGGCCCGAAGGC TTCGCCCCACCTGACACGGGCAACTGGTACGCAGAACCCTTGCGCCCCGTGCGTACCGAAGCGGAGGCTCGCGAAATCGC CGCCGTGTTGCGCGAGCATCACGTGCCCGAATTGTCCTTTGGCGCGGTCGGCGTTCCAGCCCCTGAGCTGCTCGTGGCCC TGCTCCAGGAGTCTGGTGTCGTCGCGCTTCAGGTGTCTGGCACGGACTTCGGCAATGCGCACCTCGCCTCGCTGGAAAAC GCGACCCAGCTCGAAGCCCTGCACCTCAATGCCACCCGAGTCACCAACGTGGGGCTGGCTCCTCTCAAACGAATGCGACG ACTGGCAGTGCTGCGGCTGGACGAAACGCCGGTCTCCGACGCAGGCCTTGCGTCGCTGTCAGAGCACACCACCCTGCGTC GAGTAACCCTCGCCGGAACAGCCGTATCCCCCCAGGGACTTGGATTCCTCGCGAGGCAACCGGGGCTGGAGGAACTCGAC CTGTCAGATACCGCGGTGGACGACACCGTCCTCGCAGTGCTGCCGGGCGCCCCGTTGCACACGCTCAACCTCAGCGGAAC GAAAGTCACGAATGCCGGCCTCCGCGGCCTCAGCGCCATGCCCTCCCTTCGGCGGCTGGGCCTCGCGCGTACCGCTGCCT CAGACGCCAGCCTCTTGCACATCACGGGACTCCGTGAACTGGAAGCCCTCCACCTGGGCAGCACTCAGGTGACGGACGCC GGCTTGCTCCACCTCGCGAAACTGCCCGCGCTTCGTGCGCTGGTTCTCAGCAAGGCGCGAATCCGAGGCGCAGGACTTCG CCACCTCGCGGGCCTCTCTCGACTGGAAGCGCTTCACCTCGACGACACGCTCGTGGGCGACTCAGCGCTGCGCCATCTTC GAGGACTCAACGAGCTGAGAGAGCTTGACCTCTCGCGCACCGCCATCACGGGCACGGGACTTCAAGAATTGAGCACCCTG GTGGCGCTCGAATCACTCTGGCTCTCAGGGCTCGCGCTGACGGACGATTCCCTCACGGCACTCGCTCCCCTCAGCCAACT GACGCGACTCGCGCTCAGCCACACGCCGATTGGCCCGGAGGCGCTGAACCACCTGGGTTCCCGCCCACTCCTGCGACACC TGGACTTGAGCAAGACCGGGTTCACCGACGAATGGGTGCCCTCCATACGGCAGGCCTTTCCCGGCCTCCATTCATTGAAA GCCGAACGCACCCTCCTCACGGACGCGGGGCTGGGCCAGTTCGCCGAATGGACAGAGCTGGAGGCAATCCATGTCGCGGG GACTCTCATCAATGGCTCTGGCCTGACGCGCCTGCACACCCTTGCCCGACTCACGACGCTCGACCTCGGCGCGACGAGGT TGGACTCAGAGGGCCAGAAAGCGCTCCAGGGCTTCACGAAACTCGTCTGGCTGAGCGTCGCCGGCGTCCGCACCGGCGAC GAGATGCTTGGCCACCTCCCCCGTTCGCTCCGAACCCTCTACCTGACGCGCACGAAAGTCACCGACGCGGGCCTCCCGGC GTTGCACAAGCTGCCACACCTGCGGGAACTCGACCTGCGCGGAACCGCGGTTTCCACAGAGGCCCGGAGCGCCCTGGCAC GGGAGCGCGGCATCCACCTCGTCACTGGGATGTGA
Upstream 100 bases:
>100_bases TGCTCCGTGGAGTCGCGACTGGTACCGGCACTACCCAGTAGCTGAAGTCGAAGGGCACGTTTCCGGGCTCTGCGCCGCCG CATCGAGCAAGCCCCTGTGC
Downstream 100 bases:
>100_bases GCCGCGCCCGAGCCTCACGGCACCGCCAAGGAGACGCGGCTCAGCTCACCACGGGCAGTGAAAAGCCCTCCGGCTTGCCT GTGCCCCCCGGCCGCGCCAC
Product: leucine-rich repeat-containing protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 624; Mature: 624
Protein sequence:
>624_residues MRLDLSAWRGCSDSMHSGTLRLAGLFLIMAACATRPTPVIPAPSSIPVVVTAPKPLLTVFRLEPDGTSAEFGQLPPGPEG FAPPDTGNWYAEPLRPVRTEAEAREIAAVLREHHVPELSFGAVGVPAPELLVALLQESGVVALQVSGTDFGNAHLASLEN ATQLEALHLNATRVTNVGLAPLKRMRRLAVLRLDETPVSDAGLASLSEHTTLRRVTLAGTAVSPQGLGFLARQPGLEELD LSDTAVDDTVLAVLPGAPLHTLNLSGTKVTNAGLRGLSAMPSLRRLGLARTAASDASLLHITGLRELEALHLGSTQVTDA GLLHLAKLPALRALVLSKARIRGAGLRHLAGLSRLEALHLDDTLVGDSALRHLRGLNELRELDLSRTAITGTGLQELSTL VALESLWLSGLALTDDSLTALAPLSQLTRLALSHTPIGPEALNHLGSRPLLRHLDLSKTGFTDEWVPSIRQAFPGLHSLK AERTLLTDAGLGQFAEWTELEAIHVAGTLINGSGLTRLHTLARLTTLDLGATRLDSEGQKALQGFTKLVWLSVAGVRTGD EMLGHLPRSLRTLYLTRTKVTDAGLPALHKLPHLRELDLRGTAVSTEARSALARERGIHLVTGM
Sequences:
>Translated_624_residues MRLDLSAWRGCSDSMHSGTLRLAGLFLIMAACATRPTPVIPAPSSIPVVVTAPKPLLTVFRLEPDGTSAEFGQLPPGPEG FAPPDTGNWYAEPLRPVRTEAEAREIAAVLREHHVPELSFGAVGVPAPELLVALLQESGVVALQVSGTDFGNAHLASLEN ATQLEALHLNATRVTNVGLAPLKRMRRLAVLRLDETPVSDAGLASLSEHTTLRRVTLAGTAVSPQGLGFLARQPGLEELD LSDTAVDDTVLAVLPGAPLHTLNLSGTKVTNAGLRGLSAMPSLRRLGLARTAASDASLLHITGLRELEALHLGSTQVTDA GLLHLAKLPALRALVLSKARIRGAGLRHLAGLSRLEALHLDDTLVGDSALRHLRGLNELRELDLSRTAITGTGLQELSTL VALESLWLSGLALTDDSLTALAPLSQLTRLALSHTPIGPEALNHLGSRPLLRHLDLSKTGFTDEWVPSIRQAFPGLHSLK AERTLLTDAGLGQFAEWTELEAIHVAGTLINGSGLTRLHTLARLTTLDLGATRLDSEGQKALQGFTKLVWLSVAGVRTGD EMLGHLPRSLRTLYLTRTKVTDAGLPALHKLPHLRELDLRGTAVSTEARSALARERGIHLVTGM >Mature_624_residues MRLDLSAWRGCSDSMHSGTLRLAGLFLIMAACATRPTPVIPAPSSIPVVVTAPKPLLTVFRLEPDGTSAEFGQLPPGPEG FAPPDTGNWYAEPLRPVRTEAEAREIAAVLREHHVPELSFGAVGVPAPELLVALLQESGVVALQVSGTDFGNAHLASLEN ATQLEALHLNATRVTNVGLAPLKRMRRLAVLRLDETPVSDAGLASLSEHTTLRRVTLAGTAVSPQGLGFLARQPGLEELD LSDTAVDDTVLAVLPGAPLHTLNLSGTKVTNAGLRGLSAMPSLRRLGLARTAASDASLLHITGLRELEALHLGSTQVTDA GLLHLAKLPALRALVLSKARIRGAGLRHLAGLSRLEALHLDDTLVGDSALRHLRGLNELRELDLSRTAITGTGLQELSTL VALESLWLSGLALTDDSLTALAPLSQLTRLALSHTPIGPEALNHLGSRPLLRHLDLSKTGFTDEWVPSIRQAFPGLHSLK AERTLLTDAGLGQFAEWTELEAIHVAGTLINGSGLTRLHTLARLTTLDLGATRLDSEGQKALQGFTKLVWLSVAGVRTGD EMLGHLPRSLRTLYLTRTKVTDAGLPALHKLPHLRELDLRGTAVSTEARSALARERGIHLVTGM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 66361; Mature: 66361
Theoretical pI: Translated: 7.30; Mature: 7.30
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLDLSAWRGCSDSMHSGTLRLAGLFLIMAACATRPTPVIPAPSSIPVVVTAPKPLLTVF CCCCCHHHCCCCCCHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCEEEEE RLEPDGTSAEFGQLPPGPEGFAPPDTGNWYAEPLRPVRTEAEAREIAAVLREHHVPELSF EECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCC GAVGVPAPELLVALLQESGVVALQVSGTDFGNAHLASLENATQLEALHLNATRVTNVGLA CCCCCCHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHCCCCHHEEEEEECCHHCCCCCHH PLKRMRRLAVLRLDETPVSDAGLASLSEHTTLRRVTLAGTAVSPQGLGFLARQPGLEELD HHHHHHHHHHEEECCCCCCCCCHHHHHHCCCEEEEEEECCCCCCCCCCHHHCCCCCCCCC LSDTAVDDTVLAVLPGAPLHTLNLSGTKVTNAGLRGLSAMPSLRRLGLARTAASDASLLH CCCCCCCCEEEEEECCCCEEEEECCCCEECHHHHCCHHHCHHHHHHHHHHHCCCCCCEEE ITGLRELEALHLGSTQVTDAGLLHLAKLPALRALVLSKARIRGAGLRHLAGLSRLEALHL ECCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHEECC DDTLVGDSALRHLRGLNELRELDLSRTAITGTGLQELSTLVALESLWLSGLALTDDSLTA CCHHHHHHHHHHHHHHHHHHHHCCHHHEECCCCHHHHHHHHHHHHHHHCCEEECCCCHHH LAPLSQLTRLALSHTPIGPEALNHLGSRPLLRHLDLSKTGFTDEWVPSIRQAFPGLHSLK HHHHHHHHHHHHHCCCCCHHHHHHCCCCCHHHHCCCCCCCCCHHHHHHHHHHCCCHHHHH AERTLLTDAGLGQFAEWTELEAIHVAGTLINGSGLTRLHTLARLTTLDLGATRLDSEGQK HHHHEEECCCCCCCHHHHHCEEEEEEEEEECCCCHHHHHHHHHHHHHCCCCHHCCCCHHH ALQGFTKLVWLSVAGVRTGDEMLGHLPRSLRTLYLTRTKVTDAGLPALHKLPHLRELDLR HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHEEEEEEECCCCCCCHHHHCCCCEECCCC GTAVSTEARSALARERGIHLVTGM CCEECHHHHHHHHHHCCCEEECCC >Mature Secondary Structure MRLDLSAWRGCSDSMHSGTLRLAGLFLIMAACATRPTPVIPAPSSIPVVVTAPKPLLTVF CCCCCHHHCCCCCCHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCEEEEE RLEPDGTSAEFGQLPPGPEGFAPPDTGNWYAEPLRPVRTEAEAREIAAVLREHHVPELSF EECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCC GAVGVPAPELLVALLQESGVVALQVSGTDFGNAHLASLENATQLEALHLNATRVTNVGLA CCCCCCHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHCCCCHHEEEEEECCHHCCCCCHH PLKRMRRLAVLRLDETPVSDAGLASLSEHTTLRRVTLAGTAVSPQGLGFLARQPGLEELD HHHHHHHHHHEEECCCCCCCCCHHHHHHCCCEEEEEEECCCCCCCCCCHHHCCCCCCCCC LSDTAVDDTVLAVLPGAPLHTLNLSGTKVTNAGLRGLSAMPSLRRLGLARTAASDASLLH CCCCCCCCEEEEEECCCCEEEEECCCCEECHHHHCCHHHCHHHHHHHHHHHCCCCCCEEE ITGLRELEALHLGSTQVTDAGLLHLAKLPALRALVLSKARIRGAGLRHLAGLSRLEALHL ECCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHEECC DDTLVGDSALRHLRGLNELRELDLSRTAITGTGLQELSTLVALESLWLSGLALTDDSLTA CCHHHHHHHHHHHHHHHHHHHHCCHHHEECCCCHHHHHHHHHHHHHHHCCEEECCCCHHH LAPLSQLTRLALSHTPIGPEALNHLGSRPLLRHLDLSKTGFTDEWVPSIRQAFPGLHSLK HHHHHHHHHHHHHCCCCCHHHHHHCCCCCHHHHCCCCCCCCCHHHHHHHHHHCCCHHHHH AERTLLTDAGLGQFAEWTELEAIHVAGTLINGSGLTRLHTLARLTTLDLGATRLDSEGQK HHHHEEECCCCCCCHHHHHCEEEEEEEEEECCCCHHHHHHHHHHHHHCCCCHHCCCCHHH ALQGFTKLVWLSVAGVRTGDEMLGHLPRSLRTLYLTRTKVTDAGLPALHKLPHLRELDLR HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHEEEEEEECCCCCCCHHHHCCCCEECCCC GTAVSTEARSALARERGIHLVTGM CCEECHHHHHHHHHHCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA