| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is hsfB [H]
Identifier: 108763090
GI number: 108763090
Start: 6679021
End: 6680604
Strand: Reverse
Name: hsfB [H]
Synonym: MXAN_5365
Alternate gene names: 108763090
Gene position: 6680604-6679021 (Counterclockwise)
Preceding gene: 108763957
Following gene: 108756988
Centisome position: 73.09
GC content: 68.12
Gene sequence:
>1584_bases ATGGGTTCTCAAGCCGCATATGTCCACGGTCAGCAGGCCGAATCGCCACGCGGGCGGCTGCTCCTGGTGGATGACGAGGA GAACATCCTCAAGTCCATCCGCCGGGTGCTGCGCCGCGGCGATTGGGACATCGAGACGGCGACGGACGCCGAGCAGGGCC TGCGGGCGGTGGAGGCCTTCCACCCCGAGGTGGTCATCTCCGATTTCCGCATGCCGGGGATGAATGGCGTCGATTTCCTT ACCCGGGTGAAGCAGCAGGAGCCGCGGGCCCAGCGCATCATGCTGACGGGCCAGGCGGACCAGCAGGCCATCGAAGAGGC CATCAACCGGTCGGAGATCTTCCGCTTCATCTCCAAGCCCTGGAACGACAGCCACCTGGTGTTGACGGTGAAGAGCGCCT TCGAGCAGTACGCGCTTCAGGCGGAGAACGAGCGGCTCTACACGGTGACGCAGGCGCAGAACGCGGAGCTGAAGCTGCTC AACGCGGACCTGGAGGAGCGCGTCGCCCAGCGCACGCGCATGCTGAGCCAGGCCAAGCGCGAGTGGGAGCTGTCCTTCGA CTGCATGGAGACGCCGCTGTGCGTGGTGCGCGCGCGGGACTTCGCGGTGCGGCGGGCGAACCTGGCGTACGCGGACGTGG CGGGGCGCTCCATCGAGGAGATTCCCTCCGACACCACGTGCTACCGCTACCTCTTCGGCCGCAACGAGCCGTGCACGGGC TGCCCGCTGCCGGCGGCGGTGGAGAGCGGCAAGGGCGCGCGCGGTGAGGTCCGTCAGGGCGGGCGCACCTTCGTGGTGGC CGCCTACCCCATTGCGGGGGATGAGCGCGTCGTCTGCACCTACCGGGACGTCACCGAGGAGCAGTCGATGACGCGGCGGC TCATCGAGACGGAGAAGATGGCCGCGGTGGGCCAGCTCGCCGGCGGGGTGGCGCACGAAATCAACAATCCGCTGGGCGGC ATCCTCGCCTTCGCGCAGTTGATGTCGCGCGACGCGGGCCGCAGCGACGCGGACCTGGAGTCGCTGGGCCTCATCGAGGA GAGCGCGCTGCGCTGCAAGCGCATCGTGGAGAGCCTCCTCAAGTTCAGCCGCCACAGCCGCGTGGAGGACCGGCGGCCCT TCGACTTGTCCAAGTGCGTGGAGGACGCGGCGGTGCTGTTCCGCGCGCAGCTCAAGTCCATGCCCACGGTGGAGCTGACG CTGGGGCTCGCGGACGGCCTGCCCAAGGTGTACGGCGACCCCGGTCAGCTCGCGCAGGTGGTGCTCAACCTGTTGCAGAA CGGTCTCCAGTCGCTGCCCACGCGTGAGGGCAAGCTGAAGCTGGTGACGGGTCGCGAAGGCGACCGCTGCTTCTTCGCGG TGACGGACACCGGCACGGGTATCGAGGAGAAGCACCTGCCTCGCATCTTCGAGCCGTCGTTCACCACCAAGGCCCCGGGT GAAGGCACCGGCCTGGGGCTCTCCATTGCCTACCGCATCGTCCAGGACCACGGGGGCAGCTTCCACGTGGACACCGAGGT CGGAGAAGGCTCCTGCTTCACCGTTTTTCTGCCCATCCCCCTGCAGCTCGAGAGGTTGCCGTGA
Upstream 100 bases:
>100_bases TTTCGCGCCATGGAAATGTCAAGGCCCGTGATTCCAGACTGTTGGGCAGGGAGTTTCTGCTGGCAGGGCCATTGCATTTG TCTAGGGGCGGAAACAATTC
Downstream 100 bases:
>100_bases ACCAAGTCAAGCGCGCCAAAGTCCTCGTCGTGGATGACGACTCCGTCGTCCTCAAGGCCGTGACGCAGATTCTCCAGCGC GAGGGCCACCCGGTGGTGGC
Product: response regulator/sensor histidine kinase HsfB
Products: NA
Alternate protein names: WHR virA [H]
Number of amino acids: Translated: 527; Mature: 526
Protein sequence:
>527_residues MGSQAAYVHGQQAESPRGRLLLVDDEENILKSIRRVLRRGDWDIETATDAEQGLRAVEAFHPEVVISDFRMPGMNGVDFL TRVKQQEPRAQRIMLTGQADQQAIEEAINRSEIFRFISKPWNDSHLVLTVKSAFEQYALQAENERLYTVTQAQNAELKLL NADLEERVAQRTRMLSQAKREWELSFDCMETPLCVVRARDFAVRRANLAYADVAGRSIEEIPSDTTCYRYLFGRNEPCTG CPLPAAVESGKGARGEVRQGGRTFVVAAYPIAGDERVVCTYRDVTEEQSMTRRLIETEKMAAVGQLAGGVAHEINNPLGG ILAFAQLMSRDAGRSDADLESLGLIEESALRCKRIVESLLKFSRHSRVEDRRPFDLSKCVEDAAVLFRAQLKSMPTVELT LGLADGLPKVYGDPGQLAQVVLNLLQNGLQSLPTREGKLKLVTGREGDRCFFAVTDTGTGIEEKHLPRIFEPSFTTKAPG EGTGLGLSIAYRIVQDHGGSFHVDTEVGEGSCFTVFLPIPLQLERLP
Sequences:
>Translated_527_residues MGSQAAYVHGQQAESPRGRLLLVDDEENILKSIRRVLRRGDWDIETATDAEQGLRAVEAFHPEVVISDFRMPGMNGVDFL TRVKQQEPRAQRIMLTGQADQQAIEEAINRSEIFRFISKPWNDSHLVLTVKSAFEQYALQAENERLYTVTQAQNAELKLL NADLEERVAQRTRMLSQAKREWELSFDCMETPLCVVRARDFAVRRANLAYADVAGRSIEEIPSDTTCYRYLFGRNEPCTG CPLPAAVESGKGARGEVRQGGRTFVVAAYPIAGDERVVCTYRDVTEEQSMTRRLIETEKMAAVGQLAGGVAHEINNPLGG ILAFAQLMSRDAGRSDADLESLGLIEESALRCKRIVESLLKFSRHSRVEDRRPFDLSKCVEDAAVLFRAQLKSMPTVELT LGLADGLPKVYGDPGQLAQVVLNLLQNGLQSLPTREGKLKLVTGREGDRCFFAVTDTGTGIEEKHLPRIFEPSFTTKAPG EGTGLGLSIAYRIVQDHGGSFHVDTEVGEGSCFTVFLPIPLQLERLP >Mature_526_residues GSQAAYVHGQQAESPRGRLLLVDDEENILKSIRRVLRRGDWDIETATDAEQGLRAVEAFHPEVVISDFRMPGMNGVDFLT RVKQQEPRAQRIMLTGQADQQAIEEAINRSEIFRFISKPWNDSHLVLTVKSAFEQYALQAENERLYTVTQAQNAELKLLN ADLEERVAQRTRMLSQAKREWELSFDCMETPLCVVRARDFAVRRANLAYADVAGRSIEEIPSDTTCYRYLFGRNEPCTGC PLPAAVESGKGARGEVRQGGRTFVVAAYPIAGDERVVCTYRDVTEEQSMTRRLIETEKMAAVGQLAGGVAHEINNPLGGI LAFAQLMSRDAGRSDADLESLGLIEESALRCKRIVESLLKFSRHSRVEDRRPFDLSKCVEDAAVLFRAQLKSMPTVELTL GLADGLPKVYGDPGQLAQVVLNLLQNGLQSLPTREGKLKLVTGREGDRCFFAVTDTGTGIEEKHLPRIFEPSFTTKAPGE GTGLGLSIAYRIVQDHGGSFHVDTEVGEGSCFTVFLPIPLQLERLP
Specific function: Activates virG, by phosphorylating it, in the presence of acetosyringone or hydroxysyringone [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 histidine kinase domain [H]
Homologues:
Organism=Escherichia coli, GI1790436, Length=256, Percent_Identity=32.8125, Blast_Score=134, Evalue=1e-32, Organism=Escherichia coli, GI1788549, Length=245, Percent_Identity=32.6530612244898, Blast_Score=123, Evalue=3e-29, Organism=Escherichia coli, GI87081816, Length=232, Percent_Identity=32.7586206896552, Blast_Score=103, Evalue=3e-23, Organism=Escherichia coli, GI1790300, Length=257, Percent_Identity=30.3501945525292, Blast_Score=87, Evalue=2e-18, Organism=Escherichia coli, GI48994928, Length=225, Percent_Identity=28.8888888888889, Blast_Score=87, Evalue=3e-18, Organism=Escherichia coli, GI145693157, Length=259, Percent_Identity=28.957528957529, Blast_Score=84, Evalue=3e-17, Organism=Escherichia coli, GI1788713, Length=269, Percent_Identity=24.5353159851301, Blast_Score=75, Evalue=1e-14, Organism=Escherichia coli, GI1789149, Length=223, Percent_Identity=26.457399103139, Blast_Score=74, Evalue=2e-14, Organism=Escherichia coli, GI1786600, Length=272, Percent_Identity=25.3676470588235, Blast_Score=70, Evalue=2e-13, Organism=Escherichia coli, GI1788550, Length=130, Percent_Identity=28.4615384615385, Blast_Score=69, Evalue=1e-12, Organism=Escherichia coli, GI1789808, Length=246, Percent_Identity=26.8292682926829, Blast_Score=67, Evalue=2e-12, Organism=Escherichia coli, GI1790299, Length=126, Percent_Identity=30.1587301587302, Blast_Score=64, Evalue=2e-11, Organism=Escherichia coli, GI1790346, Length=229, Percent_Identity=25.764192139738, Blast_Score=63, Evalue=4e-11, Organism=Escherichia coli, GI1786783, Length=224, Percent_Identity=27.6785714285714, Blast_Score=62, Evalue=8e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 58485; Mature: 58354
Theoretical pI: Translated: 5.34; Mature: 5.34
Prosite motif: PS50110 RESPONSE_REGULATORY ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGSQAAYVHGQQAESPRGRLLLVDDEENILKSIRRVLRRGDWDIETATDAEQGLRAVEAF CCCCCCEECCCCCCCCCCCEEEEECHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH HPEVVISDFRMPGMNGVDFLTRVKQQEPRAQRIMLTGQADQQAIEEAINRSEIFRFISKP CCCEEEECCCCCCCCCHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCC WNDSHLVLTVKSAFEQYALQAENERLYTVTQAQNAELKLLNADLEERVAQRTRMLSQAKR CCCCEEEEEHHHHHHHHHHHCCCCEEEEEECCCCCEEEEECCCHHHHHHHHHHHHHHHHH EWELSFDCMETPLCVVRARDFAVRRANLAYADVAGRSIEEIPSDTTCYRYLFGRNEPCTG HHCCCHHHHCCCEEEEEHHHHHHHHCCCEEHHHCCCCHHHCCCCCHHHHHHHCCCCCCCC CPLPAAVESGKGARGEVRQGGRTFVVAAYPIAGDERVVCTYRDVTEEQSMTRRLIETEKM CCCCHHHHCCCCCCCHHHCCCCEEEEEEEECCCCCEEEEEECCHHHHHHHHHHHHHHHHH AAVGQLAGGVAHEINNPLGGILAFAQLMSRDAGRSDADLESLGLIEESALRCKRIVESLL HHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHH KFSRHSRVEDRRPFDLSKCVEDAAVLFRAQLKSMPTVELTLGLADGLPKVYGDPGQLAQV HHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEHHCCCHHHCCCHHHHHHH VLNLLQNGLQSLPTREGKLKLVTGREGDRCFFAVTDTGTGIEEKHLPRIFEPSFTTKAPG HHHHHHHHHHHCCCCCCCEEEEECCCCCEEEEEEECCCCCCCHHCCCCCCCCCCCCCCCC EGTGLGLSIAYRIVQDHGGSFHVDTEVGEGSCFTVFLPIPLQLERLP CCCCCHHHHHHHHHHCCCCCEEEECCCCCCCEEEEEECCCEEECCCC >Mature Secondary Structure GSQAAYVHGQQAESPRGRLLLVDDEENILKSIRRVLRRGDWDIETATDAEQGLRAVEAF CCCCCEECCCCCCCCCCCEEEEECHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH HPEVVISDFRMPGMNGVDFLTRVKQQEPRAQRIMLTGQADQQAIEEAINRSEIFRFISKP CCCEEEECCCCCCCCCHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCC WNDSHLVLTVKSAFEQYALQAENERLYTVTQAQNAELKLLNADLEERVAQRTRMLSQAKR CCCCEEEEEHHHHHHHHHHHCCCCEEEEEECCCCCEEEEECCCHHHHHHHHHHHHHHHHH EWELSFDCMETPLCVVRARDFAVRRANLAYADVAGRSIEEIPSDTTCYRYLFGRNEPCTG HHCCCHHHHCCCEEEEEHHHHHHHHCCCEEHHHCCCCHHHCCCCCHHHHHHHCCCCCCCC CPLPAAVESGKGARGEVRQGGRTFVVAAYPIAGDERVVCTYRDVTEEQSMTRRLIETEKM CCCCHHHHCCCCCCCHHHCCCCEEEEEEEECCCCCEEEEEECCHHHHHHHHHHHHHHHHH AAVGQLAGGVAHEINNPLGGILAFAQLMSRDAGRSDADLESLGLIEESALRCKRIVESLL HHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHH KFSRHSRVEDRRPFDLSKCVEDAAVLFRAQLKSMPTVELTLGLADGLPKVYGDPGQLAQV HHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEHHCCCHHHCCCHHHHHHH VLNLLQNGLQSLPTREGKLKLVTGREGDRCFFAVTDTGTGIEEKHLPRIFEPSFTTKAPG HHHHHHHHHHHCCCCCCCEEEEECCCCCEEEEEEECCCCCCCHHCCCCCCCCCCCCCCCC EGTGLGLSIAYRIVQDHGGSFHVDTEVGEGSCFTVFLPIPLQLERLP CCCCCHHHHHHHHHHCCCCCEEEECCCCCCCEEEEEECCCEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 2796735; 2194232; 11743193; 11743194 [H]