Definition Myxococcus xanthus DK 1622 chromosome, complete genome.
Accession NC_008095
Length 9,139,763

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The map label for this gene is 108763039

Identifier: 108763039

GI number: 108763039

Start: 2423540

End: 2425156

Strand: Reverse

Name: 108763039

Synonym: MXAN_2091

Alternate gene names: NA

Gene position: 2425156-2423540 (Counterclockwise)

Preceding gene: 108760533

Following gene: 108759341

Centisome position: 26.53

GC content: 69.7

Gene sequence:

>1617_bases
ATGAAGACCCGAGCACTCCTGTCCCTCACCGCCCTGCTGGGGCTCGCCGGCTGCGCCACCACGCCCCAGGCGCCGCCTCC
CGACGAGAACGCGCCGCCGCCCGCGGTGCCCGCCCAGGCGGCGGCGCCCGAGCCCGCTCCGCAGCCCACGCGTCCGGAGT
CCGTGCCCGCGACGCCGCTGCGCCAGCCCAAGCCCATGGAGTTGGTCGTCCTGGCGCGTCCGGACACGCCCATCGTCTCC
TTCCGGCTCGTGTTCCACACCGGCTCCGTGGACGACCCGAAGGGCAAGGAGGGCCTCACCGCCCTCACCGCGCAGCTCAT
GGCGGAGGGCGGCACGCAGAAGCTTTCGGCCTCGCAGCTCCTGGAGGCCCTGTACCCCATGGCCGCGGAGCTGGACGTCT
TCGTGGACAAGGAGCTCACGACGTTCTCCGGCCGCGTCCACAAGGACTTCCTGACGCGCTTCCAGGACATCTTCACCGAC
GTGCTCCTGGCTCCGCGCCTGGACAAGGCCGAGCTGGAGCGCCTGCGCGCCAACGCCATCAGCGACGTGGAGAACGGCCT
GCGCAGCGCCAATGACGAGGCACTGGGCAAGGTCGCGCTGGACGCCCTGCTCTACCAGGGCCACCCCTACGCGCACTTCA
CCGGCGGCACCGTACAGGGCCTGAAGGCGATTACGCTGGACGACGTGAAGGCCCACGCCCAGCGCGTCTTCACGCAGGAC
CGGCTCGTCATCGGCCTGGCGGGCGCGGTGGATGACGCGCTCGCACAGGCGCTCAGCTCGCGCCTGTCCGCGTTGCCCGC
GAAGGGCGCTCCGCGCGTGGAGCTGCCCGCCGTTCCGACGACGGCCGGCCGCACCGTCATCATCCAGAAGCCCACGCTCT
CCACCGCCGTCAGCATGGGCTTTGTCAGCACCATCCGCCGCGGCGACCCGGACTTCTTCCCGGTGGCCTTCGCCATGTCC
AACCTGGGCGAGCACCGCCAGTCCATTGGCGTGCTCTTCACCGAGCTGCGCGAGAAGCGCGGCCTCAACTACGGCGACTA
CGCCTACGCCGAGCACTTCATCGAGTCGCCCGGCACCACGTACAACCGCACCAACATCGCGCGCACGCAGCAGGACCTGT
CCCTGTGGATTCGCCCCGTGGTGCCCACCAACGGCGTGTTCGCCACGCGCGGCGCGGTGTTCTTCCTGGACCAGATGGTG
AAGGAGGGCATCCCGCAGGAGCGCTTCGAGCTGATGCGCGGCTTCCTCCAGGGCTACACCCGCCTGTGGGAACAGACGGA
CCAACGCCGGCTGGGCTACGCCATTGACGGGCTCTTCTACGGCACGCCCGACTTCCTGGAGCAGTACCGCCAGGCCATGT
CGAAAATGACGCCGCAGTCCGTCCAGGAGGCGCTCCGCCGCCGCGTGCAGCCCGAGGCCCTCAACTTCGCCTTCGTCACC
GAGGACGCGGAGGGGCTCGCCCAGGCGCTGCGCTCCGGTGCGCCGTCGCCCATCACCTACGCATCACCCAAGTCAGAGGA
GTTGCTGACACAGGACCAGGCCATCTCCTCGTCCAAGCTGCCCCTGCGCCCGGAGGCCATCCAGGTCATCCCCGCGCAGC
AGTTCATGGAGAAATAA

Upstream 100 bases:

>100_bases
CCGCCCAGTTGTCCGACTTCGCCAAGCGCTACCTCACCGCCAACAAGCTCATCCTGCTCAGCCTCACCCCCAAGACGGAC
GCCCAGGGAGGGACGAAGTG

Downstream 100 bases:

>100_bases
CACACGGCTGTAATCAGCAGTGCCGGGGGGTGGGTCATTTCCTTCCACCCCCCGGAGTCGGGTGCTATGAGCCTGAAACA
TGCAAGGCTTCAGCTTGCGT

Product: M16 family peptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 538; Mature: 538

Protein sequence:

>538_residues
MKTRALLSLTALLGLAGCATTPQAPPPDENAPPPAVPAQAAAPEPAPQPTRPESVPATPLRQPKPMELVVLARPDTPIVS
FRLVFHTGSVDDPKGKEGLTALTAQLMAEGGTQKLSASQLLEALYPMAAELDVFVDKELTTFSGRVHKDFLTRFQDIFTD
VLLAPRLDKAELERLRANAISDVENGLRSANDEALGKVALDALLYQGHPYAHFTGGTVQGLKAITLDDVKAHAQRVFTQD
RLVIGLAGAVDDALAQALSSRLSALPAKGAPRVELPAVPTTAGRTVIIQKPTLSTAVSMGFVSTIRRGDPDFFPVAFAMS
NLGEHRQSIGVLFTELREKRGLNYGDYAYAEHFIESPGTTYNRTNIARTQQDLSLWIRPVVPTNGVFATRGAVFFLDQMV
KEGIPQERFELMRGFLQGYTRLWEQTDQRRLGYAIDGLFYGTPDFLEQYRQAMSKMTPQSVQEALRRRVQPEALNFAFVT
EDAEGLAQALRSGAPSPITYASPKSEELLTQDQAISSSKLPLRPEAIQVIPAQQFMEK

Sequences:

>Translated_538_residues
MKTRALLSLTALLGLAGCATTPQAPPPDENAPPPAVPAQAAAPEPAPQPTRPESVPATPLRQPKPMELVVLARPDTPIVS
FRLVFHTGSVDDPKGKEGLTALTAQLMAEGGTQKLSASQLLEALYPMAAELDVFVDKELTTFSGRVHKDFLTRFQDIFTD
VLLAPRLDKAELERLRANAISDVENGLRSANDEALGKVALDALLYQGHPYAHFTGGTVQGLKAITLDDVKAHAQRVFTQD
RLVIGLAGAVDDALAQALSSRLSALPAKGAPRVELPAVPTTAGRTVIIQKPTLSTAVSMGFVSTIRRGDPDFFPVAFAMS
NLGEHRQSIGVLFTELREKRGLNYGDYAYAEHFIESPGTTYNRTNIARTQQDLSLWIRPVVPTNGVFATRGAVFFLDQMV
KEGIPQERFELMRGFLQGYTRLWEQTDQRRLGYAIDGLFYGTPDFLEQYRQAMSKMTPQSVQEALRRRVQPEALNFAFVT
EDAEGLAQALRSGAPSPITYASPKSEELLTQDQAISSSKLPLRPEAIQVIPAQQFMEK
>Mature_538_residues
MKTRALLSLTALLGLAGCATTPQAPPPDENAPPPAVPAQAAAPEPAPQPTRPESVPATPLRQPKPMELVVLARPDTPIVS
FRLVFHTGSVDDPKGKEGLTALTAQLMAEGGTQKLSASQLLEALYPMAAELDVFVDKELTTFSGRVHKDFLTRFQDIFTD
VLLAPRLDKAELERLRANAISDVENGLRSANDEALGKVALDALLYQGHPYAHFTGGTVQGLKAITLDDVKAHAQRVFTQD
RLVIGLAGAVDDALAQALSSRLSALPAKGAPRVELPAVPTTAGRTVIIQKPTLSTAVSMGFVSTIRRGDPDFFPVAFAMS
NLGEHRQSIGVLFTELREKRGLNYGDYAYAEHFIESPGTTYNRTNIARTQQDLSLWIRPVVPTNGVFATRGAVFFLDQMV
KEGIPQERFELMRGFLQGYTRLWEQTDQRRLGYAIDGLFYGTPDFLEQYRQAMSKMTPQSVQEALRRRVQPEALNFAFVT
EDAEGLAQALRSGAPSPITYASPKSEELLTQDQAISSSKLPLRPEAIQVIPAQQFMEK

Specific function: Unknown

COG id: COG0612

COG function: function code R; Predicted Zn-dependent peptidases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M16 family [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6323192, Length=289, Percent_Identity=24.2214532871972, Blast_Score=65, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011249
- InterPro:   IPR011237
- InterPro:   IPR007863 [H]

Pfam domain/function: PF05193 Peptidase_M16_C [H]

EC number: NA

Molecular weight: Translated: 58730; Mature: 58730

Theoretical pI: Translated: 6.21; Mature: 6.21

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTRALLSLTALLGLAGCATTPQAPPPDENAPPPAVPAQAAAPEPAPQPTRPESVPATPL
CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
RQPKPMELVVLARPDTPIVSFRLVFHTGSVDDPKGKEGLTALTAQLMAEGGTQKLSASQL
CCCCCCEEEEEECCCCCEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHH
LEALYPMAAELDVFVDKELTTFSGRVHKDFLTRFQDIFTDVLLAPRLDKAELERLRANAI
HHHHHHHHHHHHHEECCCHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
SDVENGLRSANDEALGKVALDALLYQGHPYAHFTGGTVQGLKAITLDDVKAHAQRVFTQD
HHHHHHHHCCCHHHHHHHHHHHHHHCCCCCEEECCCHHHCCEEEHHHHHHHHHHHHHHHC
RLVIGLAGAVDDALAQALSSRLSALPAKGAPRVELPAVPTTAGRTVIIQKPTLSTAVSMG
CEEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCCCCCEEEEECCCHHHHHHHH
FVSTIRRGDPDFFPVAFAMSNLGEHRQSIGVLFTELREKRGLNYGDYAYAEHFIESPGTT
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCC
YNRTNIARTQQDLSLWIRPVVPTNGVFATRGAVFFLDQMVKEGIPQERFELMRGFLQGYT
CCCCHHHHHHHHHHHEEEECCCCCCEEHHCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
RLWEQTDQRRLGYAIDGLFYGTPDFLEQYRQAMSKMTPQSVQEALRRRVQPEALNFAFVT
HHHHHHHHHHHCHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCEEEEE
EDAEGLAQALRSGAPSPITYASPKSEELLTQDQAISSSKLPLRPEAIQVIPAQQFMEK
CCHHHHHHHHHCCCCCCCEECCCCCHHHHHHHHHCCCCCCCCCCHHHEECCHHHHHCC
>Mature Secondary Structure
MKTRALLSLTALLGLAGCATTPQAPPPDENAPPPAVPAQAAAPEPAPQPTRPESVPATPL
CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
RQPKPMELVVLARPDTPIVSFRLVFHTGSVDDPKGKEGLTALTAQLMAEGGTQKLSASQL
CCCCCCEEEEEECCCCCEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHH
LEALYPMAAELDVFVDKELTTFSGRVHKDFLTRFQDIFTDVLLAPRLDKAELERLRANAI
HHHHHHHHHHHHHEECCCHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
SDVENGLRSANDEALGKVALDALLYQGHPYAHFTGGTVQGLKAITLDDVKAHAQRVFTQD
HHHHHHHHCCCHHHHHHHHHHHHHHCCCCCEEECCCHHHCCEEEHHHHHHHHHHHHHHHC
RLVIGLAGAVDDALAQALSSRLSALPAKGAPRVELPAVPTTAGRTVIIQKPTLSTAVSMG
CEEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCCCCCEEEEECCCHHHHHHHH
FVSTIRRGDPDFFPVAFAMSNLGEHRQSIGVLFTELREKRGLNYGDYAYAEHFIESPGTT
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCC
YNRTNIARTQQDLSLWIRPVVPTNGVFATRGAVFFLDQMVKEGIPQERFELMRGFLQGYT
CCCCHHHHHHHHHHHEEEECCCCCCEEHHCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
RLWEQTDQRRLGYAIDGLFYGTPDFLEQYRQAMSKMTPQSVQEALRRRVQPEALNFAFVT
HHHHHHHHHHHCHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCEEEEE
EDAEGLAQALRSGAPSPITYASPKSEELLTQDQAISSSKLPLRPEAIQVIPAQQFMEK
CCHHHHHHHHHCCCCCCCEECCCCCHHHHHHHHHCCCCCCCCCCHHHEECCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]