| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is fabZ
Identifier: 108762744
GI number: 108762744
Start: 5919203
End: 5919664
Strand: Reverse
Name: fabZ
Synonym: MXAN_4725
Alternate gene names: 108762744
Gene position: 5919664-5919203 (Counterclockwise)
Preceding gene: 108758832
Following gene: 108760565
Centisome position: 64.77
GC content: 65.15
Gene sequence:
>462_bases ATGGACATCGGAGAGATTCTCAATCTGCTGCCGCATCGGTACCCGTTCCTGCTGGTGGACCGGGTGGTGGAGATCATCCC GGGCCAGAAGCTGACGGCCTACAAGAACGTCACCATCAACGAGCCCTTCTTCAACGGGCACTTCCCCGGTCACCCGGTGA TGCCGGGTGTGCTCATCCTGGAGGCGCTGGCGCAGGCGACGGCCATCCTCGCCTACAAGAGCGAGAACATGGATCCGTCG CGCAAGCTCACGTACCTGATGGGCGTGGACGGCGCGCGCTTCCGCAAGCCGGTGTTGCCGGGGGATCGCCTCCAGTTGGA GATCGAGGTGGTGCGTCACAAGGGCGCTGTCTGGAAGACGAAGGGCCTGGCGACGGTCGACGGCGCGCGTGTCGCCGAAG GCGAGTTCCTGGCAACCGTCGTGGACAAGGACGCCGACGCGGCTGAGAGCGCGGCATCCTGA
Upstream 100 bases:
>100_bases TGCGGGCCAGCGCCGCGGCGGGCCAGATGGCGGACCTGCTCAAGGAAGTGCGCGCCCTGCGGCGCCGGGTGGAGACGCTG GAGAAGGAAAAGGGGCCGTG
Downstream 100 bases:
>100_bases TTCGCGCCCCGCGAGCACGAGGAGACTTCATGGCTCAGGTTCATCCCACCGCGGTGGTTCATCCCGACGCCCGCCTTCAC GAAACCGTCGAGGTCGGCCC
Product: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ
Products: NA
Alternate protein names: (3R)-hydroxymyristoyl ACP dehydrase
Number of amino acids: Translated: 153; Mature: 153
Protein sequence:
>153_residues MDIGEILNLLPHRYPFLLVDRVVEIIPGQKLTAYKNVTINEPFFNGHFPGHPVMPGVLILEALAQATAILAYKSENMDPS RKLTYLMGVDGARFRKPVLPGDRLQLEIEVVRHKGAVWKTKGLATVDGARVAEGEFLATVVDKDADAAESAAS
Sequences:
>Translated_153_residues MDIGEILNLLPHRYPFLLVDRVVEIIPGQKLTAYKNVTINEPFFNGHFPGHPVMPGVLILEALAQATAILAYKSENMDPS RKLTYLMGVDGARFRKPVLPGDRLQLEIEVVRHKGAVWKTKGLATVDGARVAEGEFLATVVDKDADAAESAAS >Mature_153_residues MDIGEILNLLPHRYPFLLVDRVVEIIPGQKLTAYKNVTINEPFFNGHFPGHPVMPGVLILEALAQATAILAYKSENMDPS RKLTYLMGVDGARFRKPVLPGDRLQLEIEVVRHKGAVWKTKGLATVDGARVAEGEFLATVVDKDADAAESAAS
Specific function: Involved in saturated fatty acids biosynthesis
COG id: COG0764
COG function: function code I; 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the thioester dehydratase family. FabZ subfamily
Homologues:
Organism=Escherichia coli, GI1786377, Length=138, Percent_Identity=52.1739130434783, Blast_Score=152, Evalue=1e-38,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): FABZ_MYXXD (Q1D386)
Other databases:
- EMBL: CP000113 - RefSeq: YP_632887.1 - ProteinModelPortal: Q1D386 - SMR: Q1D386 - STRING: Q1D386 - GeneID: 4106497 - GenomeReviews: CP000113_GR - KEGG: mxa:MXAN_4725 - TIGR: MXAN_4725 - eggNOG: COG0764 - HOGENOM: HBG433282 - OMA: NVSANES - PhylomeDB: Q1D386 - BioCyc: MXAN246197:MXAN_4725-MONOMER - GO: GO:0005737 - HAMAP: MF_00406 - InterPro: IPR013114 - InterPro: IPR010084 - TIGRFAMs: TIGR01750
Pfam domain/function: PF07977 FabA
EC number: 4.2.1.-
Molecular weight: Translated: 16735; Mature: 16735
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: ACT_SITE 47-47
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDIGEILNLLPHRYPFLLVDRVVEIIPGQKLTAYKNVTINEPFFNGHFPGHPVMPGVLIL CCHHHHHHHCCCCCCHHHHHHHHHHCCCCCEEEEECCEECCCCCCCCCCCCCCCHHHHHH EALAQATAILAYKSENMDPSRKLTYLMGVDGARFRKPVLPGDRLQLEIEVVRHKGAVWKT HHHHHHHHHEEECCCCCCCCCEEEEEECCCCHHHCCCCCCCCCEEEEEEEEECCCCEEEC KGLATVDGARVAEGEFLATVVDKDADAAESAAS CCCEEECCCEECCCCEEEEEECCCCCCCCCCCC >Mature Secondary Structure MDIGEILNLLPHRYPFLLVDRVVEIIPGQKLTAYKNVTINEPFFNGHFPGHPVMPGVLIL CCHHHHHHHCCCCCCHHHHHHHHHHCCCCCEEEEECCEECCCCCCCCCCCCCCCHHHHHH EALAQATAILAYKSENMDPSRKLTYLMGVDGARFRKPVLPGDRLQLEIEVVRHKGAVWKT HHHHHHHHHEEECCCCCCCCCEEEEEECCCCHHHCCCCCCCCCEEEEEEEEECCCCEEEC KGLATVDGARVAEGEFLATVVDKDADAAESAAS CCCEEECCCEECCCCEEEEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Carbon-Oxygen Lyases; Hydro-Lyases [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA