| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is lpxA
Identifier: 108760565
GI number: 108760565
Start: 5918397
End: 5919173
Strand: Reverse
Name: lpxA
Synonym: MXAN_4724
Alternate gene names: 108760565
Gene position: 5919173-5918397 (Counterclockwise)
Preceding gene: 108762744
Following gene: 108763981
Centisome position: 64.76
GC content: 67.05
Gene sequence:
>777_bases ATGGCTCAGGTTCATCCCACCGCGGTGGTTCATCCCGACGCCCGCCTTCACGAAACCGTCGAGGTCGGCCCCTATTCCAT CATCGGTCCCCAGGTAACGATTGGTGCAGGCTCCCGCGTGGGGCCCCACGTCGTCATCGAAGGCCGCACGACGCTGGGCG AGCGCAATCGCATCTTCCAGTTCGCCTCCGTTGGCGCCGACCCGCAAGACCTCAAGTACGCGGGCGAGGACACGGAGCTG GTGCTCGGCGACGACAACCAGATTCGCGAGTTCGTGTCGCTGCACAAGGGCACCGCCGGTGGTGGCGGCGCGACCCGCGT TGGCAGTGGCAACCTCTTCATGGCCAACTGTCACGTCGCGCATGACTGCGTGGTGGGCAATGGCTGCCGCATCGGCAATG GCTCCGCGCTCGCGGGCCACGTGACGATGGAGGACCACGTCATCATCAGCGGCCTTGCGGCGGTGCATCAGTTCACCCGC CTGGGCAAGCACGCCTTCATCTCCGGCGGCGCCATGGTGACCATGGACATCCCGCCGTACGCCACCGCCCAGGGAGACCG GGCGGAGCTGGTGGGCCTCAACACGGTGGGCCTGGAGCGCAGCGGTTTCTCCAAGGAGCAGATCGAGCGGGTGAAGGAAG CGCACCGCATCCTGTTCCGCTCGAAGCTGACGCTCCAGGAGGCCATGGTGCGGCTGCGCGCGGAGCTGGCGGGCCACTCC GAGGTGGACCACCTCATCCAGTTCATCCAGCAGAGCAAGCGCGGCCTCACGCGCTGA
Upstream 100 bases:
>100_bases TCGCCGAAGGCGAGTTCCTGGCAACCGTCGTGGACAAGGACGCCGACGCGGCTGAGAGCGCGGCATCCTGATTCGCGCCC CGCGAGCACGAGGAGACTTC
Downstream 100 bases:
>100_bases CGCCGTGAGCGACGGAGGGGAATCGGCGGTGGATCGGATTGGCCTCATCGCGGGCAATGGTCGGCTGCCTTTTCTCTTCG CGCGCGCCGCGAGGAAGAAG
Product: UDP-N-acetylglucosamine acyltransferase
Products: NA
Alternate protein names: UDP-N-acetylglucosamine acyltransferase
Number of amino acids: Translated: 258; Mature: 257
Protein sequence:
>258_residues MAQVHPTAVVHPDARLHETVEVGPYSIIGPQVTIGAGSRVGPHVVIEGRTTLGERNRIFQFASVGADPQDLKYAGEDTEL VLGDDNQIREFVSLHKGTAGGGGATRVGSGNLFMANCHVAHDCVVGNGCRIGNGSALAGHVTMEDHVIISGLAAVHQFTR LGKHAFISGGAMVTMDIPPYATAQGDRAELVGLNTVGLERSGFSKEQIERVKEAHRILFRSKLTLQEAMVRLRAELAGHS EVDHLIQFIQQSKRGLTR
Sequences:
>Translated_258_residues MAQVHPTAVVHPDARLHETVEVGPYSIIGPQVTIGAGSRVGPHVVIEGRTTLGERNRIFQFASVGADPQDLKYAGEDTEL VLGDDNQIREFVSLHKGTAGGGGATRVGSGNLFMANCHVAHDCVVGNGCRIGNGSALAGHVTMEDHVIISGLAAVHQFTR LGKHAFISGGAMVTMDIPPYATAQGDRAELVGLNTVGLERSGFSKEQIERVKEAHRILFRSKLTLQEAMVRLRAELAGHS EVDHLIQFIQQSKRGLTR >Mature_257_residues AQVHPTAVVHPDARLHETVEVGPYSIIGPQVTIGAGSRVGPHVVIEGRTTLGERNRIFQFASVGADPQDLKYAGEDTELV LGDDNQIREFVSLHKGTAGGGGATRVGSGNLFMANCHVAHDCVVGNGCRIGNGSALAGHVTMEDHVIISGLAAVHQFTRL GKHAFISGGAMVTMDIPPYATAQGDRAELVGLNTVGLERSGFSKEQIERVKEAHRILFRSKLTLQEAMVRLRAELAGHSE VDHLIQFIQQSKRGLTR
Specific function: Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
COG id: COG1043
COG function: function code M; Acyl-[acyl carrier protein]--UDP-N-acetylglucosamine O-acyltransferase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transferase hexapeptide repeat family. LpxA subfamily
Homologues:
Organism=Escherichia coli, GI1786378, Length=258, Percent_Identity=48.062015503876, Blast_Score=247, Evalue=5e-67,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): LPXA_MYXXD (Q1D387)
Other databases:
- EMBL: CP000113 - RefSeq: YP_632886.1 - ProteinModelPortal: Q1D387 - SMR: Q1D387 - STRING: Q1D387 - GeneID: 4102153 - GenomeReviews: CP000113_GR - KEGG: mxa:MXAN_4724 - TIGR: MXAN_4724 - eggNOG: COG1043 - HOGENOM: HBG659295 - OMA: DLKYQGE - PhylomeDB: Q1D387 - ProtClustDB: PRK05289 - BioCyc: MXAN246197:MXAN_4724-MONOMER - GO: GO:0005737 - HAMAP: MF_00387 - InterPro: IPR010137 - InterPro: IPR011004 - PIRSF: PIRSF000456 - TIGRFAMs: TIGR01852
Pfam domain/function: SSF51161 Trimer_LpxA_like
EC number: =2.3.1.129
Molecular weight: Translated: 27622; Mature: 27491
Theoretical pI: Translated: 7.23; Mature: 7.23
Prosite motif: PS00101 HEXAPEP_TRANSFERASES
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQVHPTAVVHPDARLHETVEVGPYSIIGPQVTIGAGSRVGPHVVIEGRTTLGERNRIFQ CCCCCCCEEECCCHHHHHEEECCCEEEECCEEEECCCCCCCCEEEEECCCCCCCCHHEEE FASVGADPQDLKYAGEDTELVLGDDNQIREFVSLHKGTAGGGGATRVGSGNLFMANCHVA EECCCCCHHHCEECCCCCEEEECCCHHHHHHHHHHCCCCCCCCCEEECCCCEEEEECCEE HDCVVGNGCRIGNGSALAGHVTMEDHVIISGLAAVHQFTRLGKHAFISGGAMVTMDIPPY EEEEECCCEEECCCCEEEEEEEECCCHHHHHHHHHHHHHHHCCCEEECCCEEEEEECCCC ATAQGDRAELVGLNTVGLERSGFSKEQIERVKEAHRILFRSKLTLQEAMVRLRAELAGHS CCCCCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC EVDHLIQFIQQSKRGLTR HHHHHHHHHHHHHCCCCC >Mature Secondary Structure AQVHPTAVVHPDARLHETVEVGPYSIIGPQVTIGAGSRVGPHVVIEGRTTLGERNRIFQ CCCCCCEEECCCHHHHHEEECCCEEEECCEEEECCCCCCCCEEEEECCCCCCCCHHEEE FASVGADPQDLKYAGEDTELVLGDDNQIREFVSLHKGTAGGGGATRVGSGNLFMANCHVA EECCCCCHHHCEECCCCCEEEECCCHHHHHHHHHHCCCCCCCCCEEECCCCEEEEECCEE HDCVVGNGCRIGNGSALAGHVTMEDHVIISGLAAVHQFTRLGKHAFISGGAMVTMDIPPY EEEEECCCEEECCCCEEEEEEEECCCHHHHHHHHHHHHHHHCCCEEECCCEEEEEECCCC ATAQGDRAELVGLNTVGLERSGFSKEQIERVKEAHRILFRSKLTLQEAMVRLRAELAGHS CCCCCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC EVDHLIQFIQQSKRGLTR HHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA