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The map label for this gene is ybiA [C]

Identifier: 108762267

GI number: 108762267

Start: 6636351

End: 6636872

Strand: Direct

Name: ybiA [C]

Synonym: MXAN_5330

Alternate gene names: 108762267

Gene position: 6636351-6636872 (Clockwise)

Preceding gene: 108758739

Following gene: 108762198

Centisome position: 72.61

GC content: 64.75

Gene sequence:

>522_bases
ATGAGCGAAGCAGAACAACAGCGGTTCACCTTCTTCTGGCAGGCGCACTCCCCCTTCTCCCAGTGGCACCCTTCCGACTT
CACCGTGGACGGCGTGCGCTACGTGTGCGCGGAGCAGTACATGATGGCAGGCAAGGCGCGGCTCTTCGGTGACAACGAGG
CGCTGGCGAGCATCCTGTCATCGAAGTCGCCCAAGACGCACAAGGCCCTGGGCCGCAAGGTCCGCGATTTCGACAACACG
CGCTGGGAGAAGGCGCGTGAGCGCATCGTCTACGAGGGCAATCGCGCGAAGTTCACCCAGAGCCCGGAGTTGTTGAAGGC
ACTCCTGGCCACCGCGGGAACGGAGTTGGTGGAAGCCAGCCCCGTGGATCGCATCTGGGGTGTGGGGTTGGATGAGGAGG
ACCCGCGCATCCTTCACCCCGCGAAGTGGCGAGGACTGAACCTGCTGGGCAAGGTCCTCACGAAGCTGCGCGAGGACCTG
CTGGCGGAGGGCGTCACCGAGGCGTCCTCCGCTGAGTCGTAG

Upstream 100 bases:

>100_bases
GCGTCGGAGAGCGTCATGAAGGTGGGCAGTGTAGCGACGTTTGTCAGGCCGCTGGGCCGCCAACGTTCGTGTACAATCAA
CACCATTTCCGAGGTCGCCC

Downstream 100 bases:

>100_bases
GGCTCAGAAGTCGTAGCGCACGTGAGCCTGGTCCGACAGGACCAGGTTCACCGTGCCCGAGGTCTTCCCGAACTGCGCCC
CGAAGAGCTGCGAAACCGAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 173; Mature: 172

Protein sequence:

>173_residues
MSEAEQQRFTFFWQAHSPFSQWHPSDFTVDGVRYVCAEQYMMAGKARLFGDNEALASILSSKSPKTHKALGRKVRDFDNT
RWEKARERIVYEGNRAKFTQSPELLKALLATAGTELVEASPVDRIWGVGLDEEDPRILHPAKWRGLNLLGKVLTKLREDL
LAEGVTEASSAES

Sequences:

>Translated_173_residues
MSEAEQQRFTFFWQAHSPFSQWHPSDFTVDGVRYVCAEQYMMAGKARLFGDNEALASILSSKSPKTHKALGRKVRDFDNT
RWEKARERIVYEGNRAKFTQSPELLKALLATAGTELVEASPVDRIWGVGLDEEDPRILHPAKWRGLNLLGKVLTKLREDL
LAEGVTEASSAES
>Mature_172_residues
SEAEQQRFTFFWQAHSPFSQWHPSDFTVDGVRYVCAEQYMMAGKARLFGDNEALASILSSKSPKTHKALGRKVRDFDNTR
WEKARERIVYEGNRAKFTQSPELLKALLATAGTELVEASPVDRIWGVGLDEEDPRILHPAKWRGLNLLGKVLTKLREDLL
AEGVTEASSAES

Specific function: Unknown

COG id: COG3236

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787017, Length=148, Percent_Identity=32.4324324324324, Blast_Score=60, Evalue=6e-11,
Organism=Caenorhabditis elegans, GI17564644, Length=170, Percent_Identity=36.4705882352941, Blast_Score=119, Evalue=1e-27,
Organism=Caenorhabditis elegans, GI17558468, Length=165, Percent_Identity=38.1818181818182, Blast_Score=113, Evalue=5e-26,
Organism=Caenorhabditis elegans, GI17557728, Length=176, Percent_Identity=35.7954545454545, Blast_Score=112, Evalue=1e-25,
Organism=Caenorhabditis elegans, GI212646224, Length=182, Percent_Identity=34.6153846153846, Blast_Score=109, Evalue=9e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19538; Mature: 19407

Theoretical pI: Translated: 6.96; Mature: 6.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEAEQQRFTFFWQAHSPFSQWHPSDFTVDGVRYVCAEQYMMAGKARLFGDNEALASILS
CCCCHHHHEEEEEECCCCHHHCCCCCCCHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHH
SKSPKTHKALGRKVRDFDNTRWEKARERIVYEGNRAKFTQSPELLKALLATAGTELVEAS
CCCCHHHHHHHHHHHHCCCHHHHHHHHHHEECCCCCCCCCCHHHHHHHHHHHCHHHHHCC
PVDRIWGVGLDEEDPRILHPAKWRGLNLLGKVLTKLREDLLAEGVTEASSAES
CHHHHHCCCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
SEAEQQRFTFFWQAHSPFSQWHPSDFTVDGVRYVCAEQYMMAGKARLFGDNEALASILS
CCCHHHHEEEEEECCCCHHHCCCCCCCHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHH
SKSPKTHKALGRKVRDFDNTRWEKARERIVYEGNRAKFTQSPELLKALLATAGTELVEAS
CCCCHHHHHHHHHHHHCCCHHHHHHHHHHEECCCCCCCCCCHHHHHHHHHHHCHHHHHCC
PVDRIWGVGLDEEDPRILHPAKWRGLNLLGKVLTKLREDLLAEGVTEASSAES
CHHHHHCCCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA