Definition Myxococcus xanthus DK 1622 chromosome, complete genome.
Accession NC_008095
Length 9,139,763

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The map label for this gene is pimB [H]

Identifier: 108762198

GI number: 108762198

Start: 6638572

End: 6640812

Strand: Direct

Name: pimB [H]

Synonym: MXAN_5333

Alternate gene names: 108762198

Gene position: 6638572-6640812 (Clockwise)

Preceding gene: 108762267

Following gene: 108762811

Centisome position: 72.63

GC content: 70.37

Gene sequence:

>2241_bases
ATGGCGATCCACCAGTTGATACCGAGCTTTGTCCCCGGCGACGCCACCGGGCAGGCCGCGCTGCACCTGCAGCTCCTGCT
GCGCCGCATGGGGCACGCGGGCGCGCTGTATGCGGACGAGGTGGGCCCGGGGCTCGAAGGGCTGGCCAGCCCCGCGTCCG
CGCTGCGTCCCGAGCCCGGTGACCTGGTCCTCTACCACCATGGCATCGCCTCCCCGCTCAGCAGCCGGCTGATGCACCTG
CCCTGCCGACGCGGCATCGTCTTCCACAACATCAGCCCCGCGCGGTTCTACGAAGGGCTGCCGCTGGCGGACGCGCTGGT
GGCGGGACGGGCCCAGCTCGCCGCGATGGCCCCCTTCGCGGATGTGGCCATCGGCGTGTCGGACTTCAACGCCGCCGAGC
TGCGCGTCGCGGGTTACCGCAACGTCCACACGGTGCCCCTCTTCATCGAACCGGAGCGATTCTCCCGCGCCAGCGCGGAC
GCGAAGATGCTCCAGCGGCTCGAAGGTCCAGGCCCCGTGCTGCTCGGCGTGAGCCGGGTCATGCCGCACAAGCGCTTCGA
GGACCTGCTCGCGCTCCACCGCGAAGTCCTGCGGTTGCGCCCCCAGGCCCGCCTGTTGATGGTGGGCGGCTACGAGCCGG
GCAGCCGGTACTTCCGCATGCTCCAGCGCGAGGCGCGCGGCCTGCGCGGCGTGAGCTTCCTGGGGCGCCTGAGCCACGCG
CAGCTCGTGGCCGCGTACCGCTCCGCTTCCGTCTTCGTCTCCATGAGCGAGCATGAGGGCTTCGGTGTCCCCCTCATCGA
GGCCATGGCCGCCGAGGTGCCCGTGCTGGCCTACGCGGCCGCCGCGGTGCCGGAGACCCTGGGCGGCGCGGGCGTGGCCT
TCGACCAGAAGCGCTTCGCCTTCCTCGCGGAGCTGGCGGTGGACCTGAGCGAGGACGTCTCCCTGCGCGGGCCCGTCATC
GCTGGACAGGCGCGGCGGTTGGAGCACTTCTCCGCGCCTTCCGTGCAGACCGCCTTCACGAAGGCACTGGAAACGGTGCT
CCCCCGCCCCACGCCCACGAAGTCCCGGAAGGTTCCGGAGCGTCCCCGGGTGGCGATGGTGGTGCAGCGCTACGGCGAGG
TGACGGGCGGCGCGGAGAAGCTCGCCGCGCAAATGGCCGAGCACCTGGCGCCGCACTGGGACCTCACCTTGCTGACGACC
TGCGCGAAGAACCACCTCGTGTGGGACAACGCGTTTCCGCCCGGCCCCGACGTCGTGGACGGCATCAAGGTGTTGCGCTT
CCCGTCCACGCGGGTGCGTAACATCCGAGGCTTCAACGGCCTGTCGCGGCAGGTGTTCGACAAGAGCAACGAGCGGCTGC
GTGAAGAGCAGTGGGTGGCCGAGCAGGGCCCCATGTGCCCCGGCCTGCTGCACCACCTGGCCACCGAGCGCGACGCCTAC
GACGGCTATCTCTTCTTCACCTACCTCTACGCGCCCACGGTGTGGGGACTGCCGCTGGTGGCGGACCGGTCCCTGCTGGT
GCCCACCACACATGATGAGGCCCCCGTCCGCTTCGGTGTGTATCGGGACGTCTTCGAACGCCCGCGCGCCCTGCTCTGCC
TCACGCCGGAGGAGCACACGCTCATCGAGAAGTACTTCCCGAATCACGCACCCACGCGCGTGGTGGGCGTGGGCGTGGAC
CGGCCTCGGGCGGATGGCGCGCGCTTCAAGGAGAAGCACGGCATCCACCGGCACTACCTGCTCTACATCGGCCGTCAGGA
GCCGGGCAAAGGCGTGCCTGAGCTGCTCGAGTACCACCAGGCCCTGAAGAACCGGTTCGAGGACGCGCCGGACCTGGTGC
TCGCGGGCGACACCAACATGGAGCTGTCCGGCGAGGGCGTGCGCTATCTGGGCCGTATCGACGAGCAGGACAAACACGAC
GCGCTGGCGGGGGCGTTGGCGGTGGTGGTGCCGTCCCGCTACGAGAGCCTGTCGCTGCTGACGCTGGAGTCCTTCGCCCA
GGGCACGCCCGTGCTCGTGAACGGGCGCTCGGACGTGCTGGTGGGGCAGGTGGAGCGCAGCGGCGCGGGCCGCGCGTACA
CGGACCTGGAGTCGTTCATCCAGGGCCTGCGCGAGGTGGGCTCGGAGCGTGAGCCCATGGGCAAGCGGGGCCTGGCGTAC
GTGAAGAAGCAGGGCTGGCCGCAGGTGGTGGCGGCCTACCGGGAAGAAATGCAACGCATCCTCGAGGAGAAGCGCCGATG
A

Upstream 100 bases:

>100_bases
ATACCGGTGGTCGGCTCGTCCCAGAGTGTCGCGTCGAAGGCGATAGGTCCCATGGACACGGTGCGCCTCATAGCACGTGC
GTGTGATAGGCAGGGCCCAC

Downstream 100 bases:

>100_bases
AGTTACTGGGACGGGACATCCCCGCGCGGGAGCTGATAGCTCGCATCGAGGAGCGCCTGCGCACGCGTGGCCTCCCCACC
TCCGAGGAAGTGGAGCTGCC

Product: group 1 glycosyl transferase

Products: NA

Alternate protein names: Alpha-D-mannose-alpha-(1-6)-phosphatidylmyo-inositol-mannosyltransferase; Alpha-mannosyltransferase; Alpha-manT; Guanosine diphosphomannose-phosphatidyl-inositol alpha-mannosyltransferase; Phosphatidylinositol alpha-mannosyltransferase; PI alpha-mannosyltransferase [H]

Number of amino acids: Translated: 746; Mature: 745

Protein sequence:

>746_residues
MAIHQLIPSFVPGDATGQAALHLQLLLRRMGHAGALYADEVGPGLEGLASPASALRPEPGDLVLYHHGIASPLSSRLMHL
PCRRGIVFHNISPARFYEGLPLADALVAGRAQLAAMAPFADVAIGVSDFNAAELRVAGYRNVHTVPLFIEPERFSRASAD
AKMLQRLEGPGPVLLGVSRVMPHKRFEDLLALHREVLRLRPQARLLMVGGYEPGSRYFRMLQREARGLRGVSFLGRLSHA
QLVAAYRSASVFVSMSEHEGFGVPLIEAMAAEVPVLAYAAAAVPETLGGAGVAFDQKRFAFLAELAVDLSEDVSLRGPVI
AGQARRLEHFSAPSVQTAFTKALETVLPRPTPTKSRKVPERPRVAMVVQRYGEVTGGAEKLAAQMAEHLAPHWDLTLLTT
CAKNHLVWDNAFPPGPDVVDGIKVLRFPSTRVRNIRGFNGLSRQVFDKSNERLREEQWVAEQGPMCPGLLHHLATERDAY
DGYLFFTYLYAPTVWGLPLVADRSLLVPTTHDEAPVRFGVYRDVFERPRALLCLTPEEHTLIEKYFPNHAPTRVVGVGVD
RPRADGARFKEKHGIHRHYLLYIGRQEPGKGVPELLEYHQALKNRFEDAPDLVLAGDTNMELSGEGVRYLGRIDEQDKHD
ALAGALAVVVPSRYESLSLLTLESFAQGTPVLVNGRSDVLVGQVERSGAGRAYTDLESFIQGLREVGSEREPMGKRGLAY
VKKQGWPQVVAAYREEMQRILEEKRR

Sequences:

>Translated_746_residues
MAIHQLIPSFVPGDATGQAALHLQLLLRRMGHAGALYADEVGPGLEGLASPASALRPEPGDLVLYHHGIASPLSSRLMHL
PCRRGIVFHNISPARFYEGLPLADALVAGRAQLAAMAPFADVAIGVSDFNAAELRVAGYRNVHTVPLFIEPERFSRASAD
AKMLQRLEGPGPVLLGVSRVMPHKRFEDLLALHREVLRLRPQARLLMVGGYEPGSRYFRMLQREARGLRGVSFLGRLSHA
QLVAAYRSASVFVSMSEHEGFGVPLIEAMAAEVPVLAYAAAAVPETLGGAGVAFDQKRFAFLAELAVDLSEDVSLRGPVI
AGQARRLEHFSAPSVQTAFTKALETVLPRPTPTKSRKVPERPRVAMVVQRYGEVTGGAEKLAAQMAEHLAPHWDLTLLTT
CAKNHLVWDNAFPPGPDVVDGIKVLRFPSTRVRNIRGFNGLSRQVFDKSNERLREEQWVAEQGPMCPGLLHHLATERDAY
DGYLFFTYLYAPTVWGLPLVADRSLLVPTTHDEAPVRFGVYRDVFERPRALLCLTPEEHTLIEKYFPNHAPTRVVGVGVD
RPRADGARFKEKHGIHRHYLLYIGRQEPGKGVPELLEYHQALKNRFEDAPDLVLAGDTNMELSGEGVRYLGRIDEQDKHD
ALAGALAVVVPSRYESLSLLTLESFAQGTPVLVNGRSDVLVGQVERSGAGRAYTDLESFIQGLREVGSEREPMGKRGLAY
VKKQGWPQVVAAYREEMQRILEEKRR
>Mature_745_residues
AIHQLIPSFVPGDATGQAALHLQLLLRRMGHAGALYADEVGPGLEGLASPASALRPEPGDLVLYHHGIASPLSSRLMHLP
CRRGIVFHNISPARFYEGLPLADALVAGRAQLAAMAPFADVAIGVSDFNAAELRVAGYRNVHTVPLFIEPERFSRASADA
KMLQRLEGPGPVLLGVSRVMPHKRFEDLLALHREVLRLRPQARLLMVGGYEPGSRYFRMLQREARGLRGVSFLGRLSHAQ
LVAAYRSASVFVSMSEHEGFGVPLIEAMAAEVPVLAYAAAAVPETLGGAGVAFDQKRFAFLAELAVDLSEDVSLRGPVIA
GQARRLEHFSAPSVQTAFTKALETVLPRPTPTKSRKVPERPRVAMVVQRYGEVTGGAEKLAAQMAEHLAPHWDLTLLTTC
AKNHLVWDNAFPPGPDVVDGIKVLRFPSTRVRNIRGFNGLSRQVFDKSNERLREEQWVAEQGPMCPGLLHHLATERDAYD
GYLFFTYLYAPTVWGLPLVADRSLLVPTTHDEAPVRFGVYRDVFERPRALLCLTPEEHTLIEKYFPNHAPTRVVGVGVDR
PRADGARFKEKHGIHRHYLLYIGRQEPGKGVPELLEYHQALKNRFEDAPDLVLAGDTNMELSGEGVRYLGRIDEQDKHDA
LAGALAVVVPSRYESLSLLTLESFAQGTPVLVNGRSDVLVGQVERSGAGRAYTDLESFIQGLREVGSEREPMGKRGLAYV
KKQGWPQVVAAYREEMQRILEEKRR

Specific function: Catalyzes the addition of a mannose residue from GDP-D- mannose to the position 6 of a phosphatidyl-myo-inositol bearing an alpha-1,2-linked mannose residue (PIM1) to generate phosphatidyl-myo-inositol bearing alpha-1,2- and alpha-1,6-linked mannose resid

COG id: COG0438

COG function: function code M; Glycosyltransferase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296 [H]

Pfam domain/function: PF00534 Glycos_transf_1 [H]

EC number: =2.4.1.57 [H]

Molecular weight: Translated: 82310; Mature: 82178

Theoretical pI: Translated: 8.53; Mature: 8.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIHQLIPSFVPGDATGQAALHLQLLLRRMGHAGALYADEVGPGLEGLASPASALRPEPG
CCHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCEEHHHCCCCHHHHCCCHHHHCCCCC
DLVLYHHGIASPLSSRLMHLPCRRGIVFHNISPARFYEGLPLADALVAGRAQLAAMAPFA
CEEEEECCCCCHHHHHHHHCHHHCCEEEECCCHHHHHCCCCHHHHHHHHHHHHHHHCCHH
DVAIGVSDFNAAELRVAGYRNVHTVPLFIEPERFSRASADAKMLQRLEGPGPVLLGVSRV
HHEECCCCCCCCEEEEECCCCEEEEEEEECCHHHHHHHHHHHHHHHHCCCCCEEECHHHH
MPHKRFEDLLALHREVLRLRPQARLLMVGGYEPGSRYFRMLQREARGLRGVSFLGRLSHA
CCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHCCCCHHHHHHHHHHH
QLVAAYRSASVFVSMSEHEGFGVPLIEAMAAEVPVLAYAAAAVPETLGGAGVAFDQKRFA
HHHHHHHCCEEEEEECCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCEECHHHHH
FLAELAVDLSEDVSLRGPVIAGQARRLEHFSAPSVQTAFTKALETVLPRPTPTKSRKVPE
HHHHHHHHHHCCCCCCCCEECCHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCC
RPRVAMVVQRYGEVTGGAEKLAAQMAEHLAPHWDLTLLTTCAKNHLVWDNAFPPGPDVVD
CCHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHCCCEEECCCCCCCCCHHH
GIKVLRFPSTRVRNIRGFNGLSRQVFDKSNERLREEQWVAEQGPMCPGLLHHLATERDAY
HHHHHCCCCHHHHHCCCCCCHHHHHHHCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCC
DGYLFFTYLYAPTVWGLPLVADRSLLVPTTHDEAPVRFGVYRDVFERPRALLCLTPEEHT
CCEEHHHHHHHHHHCCCCEECCCCEEECCCCCCCCCCHHHHHHHHHCCCEEEEECCCHHH
LIEKYFPNHAPTRVVGVGVDRPRADGARFKEKHGIHRHYLLYIGRQEPGKGVPELLEYHQ
HHHHHCCCCCCCEEEEECCCCCCCCCCHHHHHCCCCEEEEEEEECCCCCCCHHHHHHHHH
ALKNRFEDAPDLVLAGDTNMELSGEGVRYLGRIDEQDKHDALAGALAVVVPSRYESLSLL
HHHHHCCCCCCEEEECCCCCEECCCCHHHHHCCCCCHHHHHHHHHHHHEECCCCCCEEEE
TLESFAQGTPVLVNGRSDVLVGQVERSGAGRAYTDLESFIQGLREVGSEREPMGKRGLAY
EHHHHCCCCCEEEECCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHH
VKKQGWPQVVAAYREEMQRILEEKRR
HHHCCCHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
AIHQLIPSFVPGDATGQAALHLQLLLRRMGHAGALYADEVGPGLEGLASPASALRPEPG
CHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCEEHHHCCCCHHHHCCCHHHHCCCCC
DLVLYHHGIASPLSSRLMHLPCRRGIVFHNISPARFYEGLPLADALVAGRAQLAAMAPFA
CEEEEECCCCCHHHHHHHHCHHHCCEEEECCCHHHHHCCCCHHHHHHHHHHHHHHHCCHH
DVAIGVSDFNAAELRVAGYRNVHTVPLFIEPERFSRASADAKMLQRLEGPGPVLLGVSRV
HHEECCCCCCCCEEEEECCCCEEEEEEEECCHHHHHHHHHHHHHHHHCCCCCEEECHHHH
MPHKRFEDLLALHREVLRLRPQARLLMVGGYEPGSRYFRMLQREARGLRGVSFLGRLSHA
CCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHCCCCHHHHHHHHHHH
QLVAAYRSASVFVSMSEHEGFGVPLIEAMAAEVPVLAYAAAAVPETLGGAGVAFDQKRFA
HHHHHHHCCEEEEEECCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCEECHHHHH
FLAELAVDLSEDVSLRGPVIAGQARRLEHFSAPSVQTAFTKALETVLPRPTPTKSRKVPE
HHHHHHHHHHCCCCCCCCEECCHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCC
RPRVAMVVQRYGEVTGGAEKLAAQMAEHLAPHWDLTLLTTCAKNHLVWDNAFPPGPDVVD
CCHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHCCCEEECCCCCCCCCHHH
GIKVLRFPSTRVRNIRGFNGLSRQVFDKSNERLREEQWVAEQGPMCPGLLHHLATERDAY
HHHHHCCCCHHHHHCCCCCCHHHHHHHCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCC
DGYLFFTYLYAPTVWGLPLVADRSLLVPTTHDEAPVRFGVYRDVFERPRALLCLTPEEHT
CCEEHHHHHHHHHHCCCCEECCCCEEECCCCCCCCCCHHHHHHHHHCCCEEEEECCCHHH
LIEKYFPNHAPTRVVGVGVDRPRADGARFKEKHGIHRHYLLYIGRQEPGKGVPELLEYHQ
HHHHHCCCCCCCEEEEECCCCCCCCCCHHHHHCCCCEEEEEEEECCCCCCCHHHHHHHHH
ALKNRFEDAPDLVLAGDTNMELSGEGVRYLGRIDEQDKHDALAGALAVVVPSRYESLSLL
HHHHHCCCCCCEEEECCCCCEECCCCHHHHHCCCCCHHHHHHHHHHHHEECCCCCCEEEE
TLESFAQGTPVLVNGRSDVLVGQVERSGAGRAYTDLESFIQGLREVGSEREPMGKRGLAY
EHHHHCCCCCEEEECCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHH
VKKQGWPQVVAAYREEMQRILEEKRR
HHHCCCHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12948626 [H]