| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108761715
Identifier: 108761715
GI number: 108761715
Start: 3970400
End: 3971437
Strand: Reverse
Name: 108761715
Synonym: MXAN_3417
Alternate gene names: NA
Gene position: 3971437-3970400 (Counterclockwise)
Preceding gene: 108763676
Following gene: 108760578
Centisome position: 43.45
GC content: 65.61
Gene sequence:
>1038_bases ATGGAACGCATGAAGCCGACACTGTGGATGATGCCCTTCCTGACTGCGCTGGCGATGAGTGGCTGCGCCGACAAGGACCC GAACTCGTTCCCCGTCCTCGAAAAGGACGCCGTGTTCGTCGTGAATGGTGGCAGCAACTCCCTCAGCGTCATTGACGTGG AGCGGCAGGAGGTCACCAGCACCCTTCGATTGAAGGACATGACCTATCCCCACCACATCAGCCTCAGCCCGGACCGGAGC CTGCTCGTGGTGGCGGTCCCCGGCATGGACCTGAGCGGCGGGCACGGCGGCGGGCACGGCGGTCACAGCATGCCTGGCAA GCTCCTCCTGCTGGACGCGAAGACGGGTAAGACGCGGGCTACGCGGCAGTTCGACGTGATGACCCACAACGGCGCCTTCT CGCCGGACGGCACCGAGGTGTGGACGGCCCTGATGGCAAAGCCGGGCGCGGTGGTCGTGCTCGACAGCCAGACGCTCGAG CCCAAGCAAACAATCGACGTGGGCGACATGCCCGCGGAGGTGACGTTCTCCCAGGACGGGCGCTACGCCTTCGTCGCCAA TGGCGACTCCAACAACGTCTCCGTCATCAACGCGGCCACCAAGGCGGTGGTGAAGACGGTGACCGTCGGGGCCAACCCGG TCGGCGCCTGGCCAGGAAACGACGGCCTCATGTACGTGGACAACGAGGACGGCAAGAGCCTCACCGGCATTGATGCCAGC ACCCTCGATGTGGCGCGCACCTATCCGCTGGGCTTCACGCCGGCCATGGCCGCCACCGCCCCCAATGGGGACCTCTGGGT GACGGACACCGACAACGGCAAGGTCATCTTCTTCGCCGCAGGTACGACGACACGTCAGGGGGAACTGGCCACTGGCGCCG GAGCCCATGGCATCGCGTTCTCCGCTGATGGCGCCACCTCATTCATCACCAACCAGACCGCGGGGACGCTCAGCATCGTC GACGTCGCCTCGCGCACCGTTCGGAAGACGCTCACCGTGGGCACTCAGCCCAACGGACTTGTCTTCCGCAAGAACTGA
Upstream 100 bases:
>100_bases AGGAGTCACCCTAAGCAACACATGCAATCAAGCTGCATTCACAACCGGACACTGCCTCTGTAGATGCCGTCGACATGATT CCGCCGAAAGGACCGTCGAA
Downstream 100 bases:
>100_bases CCCATCTCGAGGTACGAGGTGATTGGCGTGGCTCCCCCCCTGTGAGGTGGCCTGTAACTCCGCCGCTCACAGATGCCACG GGCCACCTCCATGCACAGCA
Product: putative lipoprotein
Products: NA
Alternate protein names: 40-Residue YVTN Family Beta-Propeller Repeat Protein; Surface Antigen Gene; Cell Surface Protein; Surface Layer Protein; Beta-Propeller Fold Protein; Triple Helix Repeat-Containing Collagen; 40-Residue Yvtn Family Beta-Propeller Repeat Protein; Outer Membrane Protein; PGRS-Subfamily Gly-Rich Protein; Yvtn Beta-Propeller Repeat-Containing Protein; Alkaline Serine Protease; Cytochrome D1 Heme Subunit; Cytochrome D1 Heme Region; Serine/Threonine Protein Kinase; Signal Peptide Protein; YVTN Family Beta-Propeller Repeat-Containing Protein; Alpha-1 2-Mannosidase; Lipoprotein; YVTN Family Beta-Propeller Repeat Family Protein
Number of amino acids: Translated: 345; Mature: 345
Protein sequence:
>345_residues MERMKPTLWMMPFLTALAMSGCADKDPNSFPVLEKDAVFVVNGGSNSLSVIDVERQEVTSTLRLKDMTYPHHISLSPDRS LLVVAVPGMDLSGGHGGGHGGHSMPGKLLLLDAKTGKTRATRQFDVMTHNGAFSPDGTEVWTALMAKPGAVVVLDSQTLE PKQTIDVGDMPAEVTFSQDGRYAFVANGDSNNVSVINAATKAVVKTVTVGANPVGAWPGNDGLMYVDNEDGKSLTGIDAS TLDVARTYPLGFTPAMAATAPNGDLWVTDTDNGKVIFFAAGTTTRQGELATGAGAHGIAFSADGATSFITNQTAGTLSIV DVASRTVRKTLTVGTQPNGLVFRKN
Sequences:
>Translated_345_residues MERMKPTLWMMPFLTALAMSGCADKDPNSFPVLEKDAVFVVNGGSNSLSVIDVERQEVTSTLRLKDMTYPHHISLSPDRS LLVVAVPGMDLSGGHGGGHGGHSMPGKLLLLDAKTGKTRATRQFDVMTHNGAFSPDGTEVWTALMAKPGAVVVLDSQTLE PKQTIDVGDMPAEVTFSQDGRYAFVANGDSNNVSVINAATKAVVKTVTVGANPVGAWPGNDGLMYVDNEDGKSLTGIDAS TLDVARTYPLGFTPAMAATAPNGDLWVTDTDNGKVIFFAAGTTTRQGELATGAGAHGIAFSADGATSFITNQTAGTLSIV DVASRTVRKTLTVGTQPNGLVFRKN >Mature_345_residues MERMKPTLWMMPFLTALAMSGCADKDPNSFPVLEKDAVFVVNGGSNSLSVIDVERQEVTSTLRLKDMTYPHHISLSPDRS LLVVAVPGMDLSGGHGGGHGGHSMPGKLLLLDAKTGKTRATRQFDVMTHNGAFSPDGTEVWTALMAKPGAVVVLDSQTLE PKQTIDVGDMPAEVTFSQDGRYAFVANGDSNNVSVINAATKAVVKTVTVGANPVGAWPGNDGLMYVDNEDGKSLTGIDAS TLDVARTYPLGFTPAMAATAPNGDLWVTDTDNGKVIFFAAGTTTRQGELATGAGAHGIAFSADGATSFITNQTAGTLSIV DVASRTVRKTLTVGTQPNGLVFRKN
Specific function: Unknown
COG id: COG3391
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36131; Mature: 36131
Theoretical pI: Translated: 5.60; Mature: 5.60
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MERMKPTLWMMPFLTALAMSGCADKDPNSFPVLEKDAVFVVNGGSNSLSVIDVERQEVTS CCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEECCEEEEEECCCCCEEEEECCHHHHHH TLRLKDMTYPHHISLSPDRSLLVVAVPGMDLSGGHGGGHGGHSMPGKLLLLDAKTGKTRA EEEEEECCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCC TRQFDVMTHNGAFSPDGTEVWTALMAKPGAVVVLDSQTLEPKQTIDVGDMPAEVTFSQDG EEEEEEEEECCCCCCCHHHHHHHHHCCCCEEEEECCCCCCCCCEEECCCCCCEEEECCCC RYAFVANGDSNNVSVINAATKAVVKTVTVGANPVGAWPGNDGLMYVDNEDGKSLTGIDAS CEEEEEECCCCCEEEEEHHHHEEEEEEEECCCCCCCCCCCCCEEEEECCCCCEEECCCCC TLDVARTYPLGFTPAMAATAPNGDLWVTDTDNGKVIFFAAGTTTRQGELATGAGAHGIAF CEEEEEECCCCCCCHHEEECCCCCEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCEEE SADGATSFITNQTAGTLSIVDVASRTVRKTLTVGTQPNGLVFRKN ECCCCEEEEECCCCCEEEEEHHHHHHHHHEEEECCCCCCEEEECC >Mature Secondary Structure MERMKPTLWMMPFLTALAMSGCADKDPNSFPVLEKDAVFVVNGGSNSLSVIDVERQEVTS CCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEECCEEEEEECCCCCEEEEECCHHHHHH TLRLKDMTYPHHISLSPDRSLLVVAVPGMDLSGGHGGGHGGHSMPGKLLLLDAKTGKTRA EEEEEECCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCC TRQFDVMTHNGAFSPDGTEVWTALMAKPGAVVVLDSQTLEPKQTIDVGDMPAEVTFSQDG EEEEEEEEECCCCCCCHHHHHHHHHCCCCEEEEECCCCCCCCCEEECCCCCCEEEECCCC RYAFVANGDSNNVSVINAATKAVVKTVTVGANPVGAWPGNDGLMYVDNEDGKSLTGIDAS CEEEEEECCCCCEEEEEHHHHEEEEEEEECCCCCCCCCCCCCEEEEECCCCCEEECCCCC TLDVARTYPLGFTPAMAATAPNGDLWVTDTDNGKVIFFAAGTTTRQGELATGAGAHGIAF CEEEEEECCCCCCCHHEEECCCCCEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCEEE SADGATSFITNQTAGTLSIVDVASRTVRKTLTVGTQPNGLVFRKN ECCCCEEEEECCCCCEEEEEHHHHHHHHHEEEECCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA