| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108760578
Identifier: 108760578
GI number: 108760578
Start: 3969632
End: 3970225
Strand: Reverse
Name: 108760578
Synonym: MXAN_3416
Alternate gene names: NA
Gene position: 3970225-3969632 (Counterclockwise)
Preceding gene: 108761715
Following gene: 108759546
Centisome position: 43.44
GC content: 60.77
Gene sequence:
>594_bases ATGAAATCCTCAATGCTATGCAGCGCCCTGGTGGTCGTCTTCCTCGCAGCAGTAGCGGGGTGTGGAGATGACGAGTCGCA CGGGGGCATGTCCATGGACAGTGACGTTGCCCCCGAGCGGCTCGTCGTGGACGGCAACTATTCCGACGAGCGGTTTATCG ACATGATGGCCGCGCACCACCAAATGGCCACCGAGATGGCCATGGTCGAGGAGCAACGCGGCACGCGTCAGGAGCTCCGG GCGCTGGCCACGAAAATGATTCAGGACCAGCGTCAAGAAATCGAGGAACTGAAGGCCCTCAAGCAGGCCAACTTCGGCTC CTCGGATGTGCCGACGATGATGAGCGAGTCCGAGATGCAAAACAGCGGCATGCTGATGACCGCCGAGCTCGCGCGACAAC CGGACGTCGACAAGGCGTTCATCGATTCGATGATGCCGCACCACTCAAGCGCCATTCTGATGGCGAGCGTCGCGCTTCGG CGGACCAGCAACGCGGAGATTCGCGCACTTGCCCGCGGAATCATCGACGCACAGACGAAGGAGATCGGTCAGATGATTGA GTGGCGCAAGTCCTGGTACGGCAGTCAACCGTAG
Upstream 100 bases:
>100_bases GCCACGGGCCACCTCCATGCACAGCATCCGGCGCGGCGGACGCCTCTGGCAATTCGGCACACCGCGGATGCCAGGCGTCC GACCTGGAGGCTGTGAACGT
Downstream 100 bases:
>100_bases CGGGCATCGGCGCATTCACGACTGGAGGCGGCGAGCCACCGCCTCCACCGCCTTGAGCCCCTGAGCGAAGCAGCCCCGGC GTGGGGCGCAGAAAAGTGTG
Product: putative lipoprotein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 197; Mature: 197
Protein sequence:
>197_residues MKSSMLCSALVVVFLAAVAGCGDDESHGGMSMDSDVAPERLVVDGNYSDERFIDMMAAHHQMATEMAMVEEQRGTRQELR ALATKMIQDQRQEIEELKALKQANFGSSDVPTMMSESEMQNSGMLMTAELARQPDVDKAFIDSMMPHHSSAILMASVALR RTSNAEIRALARGIIDAQTKEIGQMIEWRKSWYGSQP
Sequences:
>Translated_197_residues MKSSMLCSALVVVFLAAVAGCGDDESHGGMSMDSDVAPERLVVDGNYSDERFIDMMAAHHQMATEMAMVEEQRGTRQELR ALATKMIQDQRQEIEELKALKQANFGSSDVPTMMSESEMQNSGMLMTAELARQPDVDKAFIDSMMPHHSSAILMASVALR RTSNAEIRALARGIIDAQTKEIGQMIEWRKSWYGSQP >Mature_197_residues MKSSMLCSALVVVFLAAVAGCGDDESHGGMSMDSDVAPERLVVDGNYSDERFIDMMAAHHQMATEMAMVEEQRGTRQELR ALATKMIQDQRQEIEELKALKQANFGSSDVPTMMSESEMQNSGMLMTAELARQPDVDKAFIDSMMPHHSSAILMASVALR RTSNAEIRALARGIIDAQTKEIGQMIEWRKSWYGSQP
Specific function: Unknown
COG id: COG3544
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21821; Mature: 21821
Theoretical pI: Translated: 4.70; Mature: 4.70
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 9.6 %Met (Translated Protein) 10.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 9.6 %Met (Mature Protein) 10.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSSMLCSALVVVFLAAVAGCGDDESHGGMSMDSDVAPERLVVDGNYSDERFIDMMAAHH CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHH QMATEMAMVEEQRGTRQELRALATKMIQDQRQEIEELKALKQANFGSSDVPTMMSESEMQ HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH NSGMLMTAELARQPDVDKAFIDSMMPHHSSAILMASVALRRTSNAEIRALARGIIDAQTK HCCCEEEHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH EIGQMIEWRKSWYGSQP HHHHHHHHHHHHCCCCC >Mature Secondary Structure MKSSMLCSALVVVFLAAVAGCGDDESHGGMSMDSDVAPERLVVDGNYSDERFIDMMAAHH CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHH QMATEMAMVEEQRGTRQELRALATKMIQDQRQEIEELKALKQANFGSSDVPTMMSESEMQ HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH NSGMLMTAELARQPDVDKAFIDSMMPHHSSAILMASVALRRTSNAEIRALARGIIDAQTK HCCCEEEHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH EIGQMIEWRKSWYGSQP HHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA