Definition Myxococcus xanthus DK 1622 chromosome, complete genome.
Accession NC_008095
Length 9,139,763

Click here to switch to the map view.

The map label for this gene is 108760578

Identifier: 108760578

GI number: 108760578

Start: 3969632

End: 3970225

Strand: Reverse

Name: 108760578

Synonym: MXAN_3416

Alternate gene names: NA

Gene position: 3970225-3969632 (Counterclockwise)

Preceding gene: 108761715

Following gene: 108759546

Centisome position: 43.44

GC content: 60.77

Gene sequence:

>594_bases
ATGAAATCCTCAATGCTATGCAGCGCCCTGGTGGTCGTCTTCCTCGCAGCAGTAGCGGGGTGTGGAGATGACGAGTCGCA
CGGGGGCATGTCCATGGACAGTGACGTTGCCCCCGAGCGGCTCGTCGTGGACGGCAACTATTCCGACGAGCGGTTTATCG
ACATGATGGCCGCGCACCACCAAATGGCCACCGAGATGGCCATGGTCGAGGAGCAACGCGGCACGCGTCAGGAGCTCCGG
GCGCTGGCCACGAAAATGATTCAGGACCAGCGTCAAGAAATCGAGGAACTGAAGGCCCTCAAGCAGGCCAACTTCGGCTC
CTCGGATGTGCCGACGATGATGAGCGAGTCCGAGATGCAAAACAGCGGCATGCTGATGACCGCCGAGCTCGCGCGACAAC
CGGACGTCGACAAGGCGTTCATCGATTCGATGATGCCGCACCACTCAAGCGCCATTCTGATGGCGAGCGTCGCGCTTCGG
CGGACCAGCAACGCGGAGATTCGCGCACTTGCCCGCGGAATCATCGACGCACAGACGAAGGAGATCGGTCAGATGATTGA
GTGGCGCAAGTCCTGGTACGGCAGTCAACCGTAG

Upstream 100 bases:

>100_bases
GCCACGGGCCACCTCCATGCACAGCATCCGGCGCGGCGGACGCCTCTGGCAATTCGGCACACCGCGGATGCCAGGCGTCC
GACCTGGAGGCTGTGAACGT

Downstream 100 bases:

>100_bases
CGGGCATCGGCGCATTCACGACTGGAGGCGGCGAGCCACCGCCTCCACCGCCTTGAGCCCCTGAGCGAAGCAGCCCCGGC
GTGGGGCGCAGAAAAGTGTG

Product: putative lipoprotein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 197; Mature: 197

Protein sequence:

>197_residues
MKSSMLCSALVVVFLAAVAGCGDDESHGGMSMDSDVAPERLVVDGNYSDERFIDMMAAHHQMATEMAMVEEQRGTRQELR
ALATKMIQDQRQEIEELKALKQANFGSSDVPTMMSESEMQNSGMLMTAELARQPDVDKAFIDSMMPHHSSAILMASVALR
RTSNAEIRALARGIIDAQTKEIGQMIEWRKSWYGSQP

Sequences:

>Translated_197_residues
MKSSMLCSALVVVFLAAVAGCGDDESHGGMSMDSDVAPERLVVDGNYSDERFIDMMAAHHQMATEMAMVEEQRGTRQELR
ALATKMIQDQRQEIEELKALKQANFGSSDVPTMMSESEMQNSGMLMTAELARQPDVDKAFIDSMMPHHSSAILMASVALR
RTSNAEIRALARGIIDAQTKEIGQMIEWRKSWYGSQP
>Mature_197_residues
MKSSMLCSALVVVFLAAVAGCGDDESHGGMSMDSDVAPERLVVDGNYSDERFIDMMAAHHQMATEMAMVEEQRGTRQELR
ALATKMIQDQRQEIEELKALKQANFGSSDVPTMMSESEMQNSGMLMTAELARQPDVDKAFIDSMMPHHSSAILMASVALR
RTSNAEIRALARGIIDAQTKEIGQMIEWRKSWYGSQP

Specific function: Unknown

COG id: COG3544

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21821; Mature: 21821

Theoretical pI: Translated: 4.70; Mature: 4.70

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
9.6 %Met     (Translated Protein)
10.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
9.6 %Met     (Mature Protein)
10.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSSMLCSALVVVFLAAVAGCGDDESHGGMSMDSDVAPERLVVDGNYSDERFIDMMAAHH
CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHH
QMATEMAMVEEQRGTRQELRALATKMIQDQRQEIEELKALKQANFGSSDVPTMMSESEMQ
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
NSGMLMTAELARQPDVDKAFIDSMMPHHSSAILMASVALRRTSNAEIRALARGIIDAQTK
HCCCEEEHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
EIGQMIEWRKSWYGSQP
HHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MKSSMLCSALVVVFLAAVAGCGDDESHGGMSMDSDVAPERLVVDGNYSDERFIDMMAAHH
CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHH
QMATEMAMVEEQRGTRQELRALATKMIQDQRQEIEELKALKQANFGSSDVPTMMSESEMQ
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
NSGMLMTAELARQPDVDKAFIDSMMPHHSSAILMASVALRRTSNAEIRALARGIIDAQTK
HCCCEEEHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
EIGQMIEWRKSWYGSQP
HHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA