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The map label for this gene is qseC [H]

Identifier: 108758843

GI number: 108758843

Start: 1987029

End: 1988195

Strand: Reverse

Name: qseC [H]

Synonym: MXAN_1679

Alternate gene names: 108758843

Gene position: 1988195-1987029 (Counterclockwise)

Preceding gene: 108758424

Following gene: 108760780

Centisome position: 21.75

GC content: 68.21

Gene sequence:

>1167_bases
ATGGGCATGTCCGCGGCGCTCGCGCTCGTCCTGATGGGGACGTTCTTCACGCTCTTCAGCTACGACCTCGAAGACGCCAT
CTTCGCTCGGCTCGTCGCCACCGCGGCGGACGGACGCAGGGATGACACGGGGGCCATCCCACTTGGAATGACGGCCTATG
TCGGCCACGAAGGCCTTCCGTCCTGGCTCGGAGACGCGCTCCCCCTGGACACACCTCGCGGCGAATACGAGGTCTTTGCT
CAAGGCCGTGGGCACTTCCATGTCGCGGTGCGACCGGACGCGTCGGCTGGCACGACGCGCTACGTGGTCTTGGACACGAC
GGCGCTGACGAGCACCACCCGCCACCTGCGCCAGACGTCCGGACTGCTGCTGGCAAGTGCCCTGCTGGCCCTGCTGGGCG
CCGCCGGGCTCTCCCTTGTCGTCGCGAGGAGGCTCAGCCGTCCGCTGGAACAGCTCGTGGCACGCGTCCAGTCGGATACT
CTGGCGCCGGAAGTGGACGTCGGGGTCACCGAGGTGCGGGCCCTGGCCGAAGCCCTGCGTGTCCGGGATGCCCGAATCCA
GGAACTGCTGGAGCGGGAGCGCGCCTTCAACCGGGACGCGAGCCATGAACTGCGTACGCCCCTCGCCGTGGCGCAAGGCG
CGGTGGAGATACTGGAGTTGGACCCACCCGCGGACACGGAGACCTTCGGCCGTCTGCGGCAGGCCATTCACCACATGGGC
CTGCTGACAGAGGGCATCCTCTGGCTGGCCCGGTCAGGCCGCTCCGACGAATCGTGCGGACTGGTGAGCATCTCCCGCGA
AATGGTCGCGCTGTACGGCAAACACCGCCCTCACGGCGACGTGGCGCTTGTCATCGAGGCGAAAGAGGAGGTCCTCGCGC
CACTTCCGGGGTCCGTGGCGCGAGTGATGCTGGGCAACCTCATCAAGAACGCGCTCGCCTATACGCACCAGGGGCGCATC
GTCATCCACATCGCGCCAGAGGGCTGGAGCATCTCCGACACAGGCGTGGGCTTCGGCCAGGTCGAACCCGGACACTCGGG
CTTCGGTATCGGCCTGTCCCTCGTGGAGCGGCTGGCGCGCCGGTTCAACTGCGACGTGGCCTTCAGCGCCGTGGAGCCAC
ACGGGACGAGGGTACGGCTCACCTGGCCATCCGTGGAGCCCGGCTGA

Upstream 100 bases:

>100_bases
GAGCTGGGGATGAGCGACTGCATCACCACCCTCCGCAACAAGGGATACCGCCTGGATGCGCGCGAGGACTAGGTCGGTCC
GAGGTCTCCTCCTGGGCGCC

Downstream 100 bases:

>100_bases
CTGGGGGACCGCGACGCACGGCATCCCGTGCGTCGTGGCAGCGTCACGCCATTCCCACGTGCGGAGCGGCGCGAGCCGCC
CCGCCTGCTGCGACGGCTAG

Product: sensor histidine kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 388; Mature: 387

Protein sequence:

>388_residues
MGMSAALALVLMGTFFTLFSYDLEDAIFARLVATAADGRRDDTGAIPLGMTAYVGHEGLPSWLGDALPLDTPRGEYEVFA
QGRGHFHVAVRPDASAGTTRYVVLDTTALTSTTRHLRQTSGLLLASALLALLGAAGLSLVVARRLSRPLEQLVARVQSDT
LAPEVDVGVTEVRALAEALRVRDARIQELLERERAFNRDASHELRTPLAVAQGAVEILELDPPADTETFGRLRQAIHHMG
LLTEGILWLARSGRSDESCGLVSISREMVALYGKHRPHGDVALVIEAKEEVLAPLPGSVARVMLGNLIKNALAYTHQGRI
VIHIAPEGWSISDTGVGFGQVEPGHSGFGIGLSLVERLARRFNCDVAFSAVEPHGTRVRLTWPSVEPG

Sequences:

>Translated_388_residues
MGMSAALALVLMGTFFTLFSYDLEDAIFARLVATAADGRRDDTGAIPLGMTAYVGHEGLPSWLGDALPLDTPRGEYEVFA
QGRGHFHVAVRPDASAGTTRYVVLDTTALTSTTRHLRQTSGLLLASALLALLGAAGLSLVVARRLSRPLEQLVARVQSDT
LAPEVDVGVTEVRALAEALRVRDARIQELLERERAFNRDASHELRTPLAVAQGAVEILELDPPADTETFGRLRQAIHHMG
LLTEGILWLARSGRSDESCGLVSISREMVALYGKHRPHGDVALVIEAKEEVLAPLPGSVARVMLGNLIKNALAYTHQGRI
VIHIAPEGWSISDTGVGFGQVEPGHSGFGIGLSLVERLARRFNCDVAFSAVEPHGTRVRLTWPSVEPG
>Mature_387_residues
GMSAALALVLMGTFFTLFSYDLEDAIFARLVATAADGRRDDTGAIPLGMTAYVGHEGLPSWLGDALPLDTPRGEYEVFAQ
GRGHFHVAVRPDASAGTTRYVVLDTTALTSTTRHLRQTSGLLLASALLALLGAAGLSLVVARRLSRPLEQLVARVQSDTL
APEVDVGVTEVRALAEALRVRDARIQELLERERAFNRDASHELRTPLAVAQGAVEILELDPPADTETFGRLRQAIHHMGL
LTEGILWLARSGRSDESCGLVSISREMVALYGKHRPHGDVALVIEAKEEVLAPLPGSVARVMLGNLIKNALAYTHQGRIV
IHIAPEGWSISDTGVGFGQVEPGHSGFGIGLSLVERLARRFNCDVAFSAVEPHGTRVRLTWPSVEPG

Specific function: Member of a two-component regulatory system qseB/qseC. Activates the flagella regulon by activating transcription of flhDC. May activate qseB by phosphorylation [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 histidine kinase domain [H]

Homologues:

Organism=Escherichia coli, GI1789403, Length=249, Percent_Identity=28.1124497991968, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI1790551, Length=251, Percent_Identity=28.2868525896414, Blast_Score=67, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR004358
- InterPro:   IPR003661
- InterPro:   IPR005467
- InterPro:   IPR009082 [H]

Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 41732; Mature: 41601

Theoretical pI: Translated: 6.32; Mature: 6.32

Prosite motif: PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGMSAALALVLMGTFFTLFSYDLEDAIFARLVATAADGRRDDTGAIPLGMTAYVGHEGLP
CCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCCCCH
SWLGDALPLDTPRGEYEVFAQGRGHFHVAVRPDASAGTTRYVVLDTTALTSTTRHLRQTS
HHHCCCCCCCCCCCCEEEEECCCCEEEEEECCCCCCCCEEEEEEECHHHHHHHHHHHHHH
GLLLASALLALLGAAGLSLVVARRLSRPLEQLVARVQSDTLAPEVDVGVTEVRALAEALR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH
VRDARIQELLERERAFNRDASHELRTPLAVAQGAVEILELDPPADTETFGRLRQAIHHMG
HHHHHHHHHHHHHHHCCCCCCHHHHCHHHHHHCCEEEEECCCCCCHHHHHHHHHHHHHHH
LLTEGILWLARSGRSDESCGLVSISREMVALYGKHRPHGDVALVIEAKEEVLAPLPGSVA
HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEECHHHHHCCCCHHHH
RVMLGNLIKNALAYTHQGRIVIHIAPEGWSISDTGVGFGQVEPGHSGFGIGLSLVERLAR
HHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
RFNCDVAFSAVEPHGTRVRLTWPSVEPG
HCCCCEEEEEECCCCCEEEEECCCCCCC
>Mature Secondary Structure 
GMSAALALVLMGTFFTLFSYDLEDAIFARLVATAADGRRDDTGAIPLGMTAYVGHEGLP
CHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCCCCH
SWLGDALPLDTPRGEYEVFAQGRGHFHVAVRPDASAGTTRYVVLDTTALTSTTRHLRQTS
HHHCCCCCCCCCCCCEEEEECCCCEEEEEECCCCCCCCEEEEEEECHHHHHHHHHHHHHH
GLLLASALLALLGAAGLSLVVARRLSRPLEQLVARVQSDTLAPEVDVGVTEVRALAEALR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH
VRDARIQELLERERAFNRDASHELRTPLAVAQGAVEILELDPPADTETFGRLRQAIHHMG
HHHHHHHHHHHHHHHCCCCCCHHHHCHHHHHHCCEEEEECCCCCCHHHHHHHHHHHHHHH
LLTEGILWLARSGRSDESCGLVSISREMVALYGKHRPHGDVALVIEAKEEVLAPLPGSVA
HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEECHHHHHCCCCHHHH
RVMLGNLIKNALAYTHQGRIVIHIAPEGWSISDTGVGFGQVEPGHSGFGIGLSLVERLAR
HHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
RFNCDVAFSAVEPHGTRVRLTWPSVEPG
HCCCCEEEEEECCCCCEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796; 11929534 [H]