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The map label for this gene is ygcU [H]

Identifier: 108760780

GI number: 108760780

Start: 1983147

End: 1985042

Strand: Reverse

Name: ygcU [H]

Synonym: MXAN_1676

Alternate gene names: 108760780

Gene position: 1985042-1983147 (Counterclockwise)

Preceding gene: 108758843

Following gene: 108761562

Centisome position: 21.72

GC content: 66.67

Gene sequence:

>1896_bases
ATGGCTAAACAATCAGGTTTGCTGCGCCGTCTTGGGAATGTGGCGCTGAATGAGGTGAGCGAGCGCTTCGGCAGCACGTC
ACCCACGCCTTCCTCCGGAGACACGCGCTTCACGCCGCCGACGCCTGCCGCGTCGAAGGACGAAGAATCACTCGAAGGCT
GGGGCTTCGCCGACACGCGTTTCGTGGTGAAGCCCGACGGGAGCACCGTTCTCACGGGCACCCGCTACAACATCAGCAAT
GTCGCGCTGCCAGACTTGATGCAGTGGTTCGCCGGCAAGCTGGCCTCGCCGCTGGGGTACGACAATCGCAACGAGCCGCA
CTACCCGCCCGAGATTCCCGCGGCGAAGAAGAACGACAAGCTTGTAGCGGCGCTGCGCGAGTTCCTGAAGGAAGAGCAGC
TCACCGACGACCCCAAGCAGCGCCTGCGCCGTGGCCATGGCCACACCGGCGGTGAAATCTGGGCCATCCGCTACGGAAAG
CTGGACCGGGTGCCCGACCTCGTCGTCTTCCCGCGCGGCCACGATGAGGTGGTGCGACTGGTGGAGGTCGCCACCCAGCA
CGGCGCCTGTGTCATCCCCTTCGGCGGCGGCACCAATGTGACGGAGGCGCTGCGCATCCCGCTCTCCGAGGAGCGCCTGG
TCATCGCCGTCGACATGCGGCAGATGAACCGGATTCTGTGGGTGGACCCCGTCAACCGCATGGCCTGCATCGAGGCGGGT
GCCACGGGCCGTCACCTGATGGAGGAGCTCGCGAAGTTCGGCTTCACCATGGGCCATGAGCCGGACAGCCTCGAGTTCTC
CACGCTCGGCGGGTGGATTGCCACGAACGCCAGCGGCATGAAGAAGAACCGCTACGGCAACATCGAGGACCTGGTGCTCG
ACATGCAGGTCGTCACGCCCCAGGGCATCGTGGAGCGCCCGCGCCAGGCCCCCCGGGAGAGTGTGGGCGTCAACCCGCGC
CAGTACATGTTCGGCAGCGAGGGCAACTTCGGCATCGTCACCACGGCGGTGGTGAAGCTGTTCCCCCTTCCCGAAGTGCA
GCGCTACGGCTCGGTCATCTTCCCCGACCTCGAAACGGGCCTCTCGTTCCTCTACGCGCTCCAGCAGTCGGGAGCGGTGC
CGGCCAGCGTGCGGGTGATGGACAACACCCAGTTCCACTTCGGCCAGGCGCTCAAGCCAGCCAAGCACGGGCTGGCCGCG
AAGGTGAAGAGCGAGGTCGAGAAGGCCGTGGTGACGAAGCTCAAGGGCTTCGACCCGTACAAGCTCGCCGTGGCCACCCT
CGTGTTCGAGGGCTCGCGCGAGGAGGTCGCCTTCCAGGAGAAGACGGTGTACCGCATCGCCTCGGAGCACGGCGGCATGA
AGGGCGGTGGCGCCAACGGTGAACGCGGCTACCAGTTGACCTTCGGCATCGCGTACATCCGGGACCTCACCTTCGAGCAC
TGGGCCATCGCCGAGAGCTTCGAGACGAGCGTGCCGTGGAGCCGTGCCATGGACCTCTACGAGCGCGTGCAGCGCCGCGT
GGAGAAGGAGCACGCCGCGCTGGGCCTTCCGGGCAAGGTCTTCTTCACCGGCCGCTTCACGCAAGTCTACCAGACGGGCG
TGGCCATCTATTTCTATCTGGGCTTCTACGCGCGCGGCGTCAGCGACCCGGTGGGCGCCTACGCGGCGCTCGAGCATGCG
GCGCGCGAGGAGATCCTGGCCGCTGGCGGCTCGCTGTCGCATCACCACGGCGTCGGGAAGATTCGCCGCGACTTCCTGCC
CGAGGTGTACTCGGAGGCCGCACTGGCCCTCAACCGCAAGGTCAAGGCCGCCATCGACCCCGACAACGTCTTCGGCGCGT
CGAACTGCGGAATCAACGGCCCGGTGGCCCTGACCCCGGATGAGGAGGCGCACTGA

Upstream 100 bases:

>100_bases
TACGAGACCGGCGGTTCCGAAATCGCGTAACGCAGTGCGCACCTGCGTAACCCGCGCGCGTTGACGGAGAAGAGGGCCCT
GTGTACGACTGCGAGTGACC

Downstream 100 bases:

>100_bases
TGTCCCGCCACGTATTTCTCACCGGCGTCACGGGGTTTGTCGGCAAGGTGGTGCTGGAGGCGCTGCTCGCGCAGGGCGTC
GAGCGCGTCACGGTGCTGGT

Product: oxidase, FAD binding

Products: alkyl-glycerone 3-phosphate; long-chain acid anion

Alternate protein names: NA

Number of amino acids: Translated: 631; Mature: 630

Protein sequence:

>631_residues
MAKQSGLLRRLGNVALNEVSERFGSTSPTPSSGDTRFTPPTPAASKDEESLEGWGFADTRFVVKPDGSTVLTGTRYNISN
VALPDLMQWFAGKLASPLGYDNRNEPHYPPEIPAAKKNDKLVAALREFLKEEQLTDDPKQRLRRGHGHTGGEIWAIRYGK
LDRVPDLVVFPRGHDEVVRLVEVATQHGACVIPFGGGTNVTEALRIPLSEERLVIAVDMRQMNRILWVDPVNRMACIEAG
ATGRHLMEELAKFGFTMGHEPDSLEFSTLGGWIATNASGMKKNRYGNIEDLVLDMQVVTPQGIVERPRQAPRESVGVNPR
QYMFGSEGNFGIVTTAVVKLFPLPEVQRYGSVIFPDLETGLSFLYALQQSGAVPASVRVMDNTQFHFGQALKPAKHGLAA
KVKSEVEKAVVTKLKGFDPYKLAVATLVFEGSREEVAFQEKTVYRIASEHGGMKGGGANGERGYQLTFGIAYIRDLTFEH
WAIAESFETSVPWSRAMDLYERVQRRVEKEHAALGLPGKVFFTGRFTQVYQTGVAIYFYLGFYARGVSDPVGAYAALEHA
AREEILAAGGSLSHHHGVGKIRRDFLPEVYSEAALALNRKVKAAIDPDNVFGASNCGINGPVALTPDEEAH

Sequences:

>Translated_631_residues
MAKQSGLLRRLGNVALNEVSERFGSTSPTPSSGDTRFTPPTPAASKDEESLEGWGFADTRFVVKPDGSTVLTGTRYNISN
VALPDLMQWFAGKLASPLGYDNRNEPHYPPEIPAAKKNDKLVAALREFLKEEQLTDDPKQRLRRGHGHTGGEIWAIRYGK
LDRVPDLVVFPRGHDEVVRLVEVATQHGACVIPFGGGTNVTEALRIPLSEERLVIAVDMRQMNRILWVDPVNRMACIEAG
ATGRHLMEELAKFGFTMGHEPDSLEFSTLGGWIATNASGMKKNRYGNIEDLVLDMQVVTPQGIVERPRQAPRESVGVNPR
QYMFGSEGNFGIVTTAVVKLFPLPEVQRYGSVIFPDLETGLSFLYALQQSGAVPASVRVMDNTQFHFGQALKPAKHGLAA
KVKSEVEKAVVTKLKGFDPYKLAVATLVFEGSREEVAFQEKTVYRIASEHGGMKGGGANGERGYQLTFGIAYIRDLTFEH
WAIAESFETSVPWSRAMDLYERVQRRVEKEHAALGLPGKVFFTGRFTQVYQTGVAIYFYLGFYARGVSDPVGAYAALEHA
AREEILAAGGSLSHHHGVGKIRRDFLPEVYSEAALALNRKVKAAIDPDNVFGASNCGINGPVALTPDEEAH
>Mature_630_residues
AKQSGLLRRLGNVALNEVSERFGSTSPTPSSGDTRFTPPTPAASKDEESLEGWGFADTRFVVKPDGSTVLTGTRYNISNV
ALPDLMQWFAGKLASPLGYDNRNEPHYPPEIPAAKKNDKLVAALREFLKEEQLTDDPKQRLRRGHGHTGGEIWAIRYGKL
DRVPDLVVFPRGHDEVVRLVEVATQHGACVIPFGGGTNVTEALRIPLSEERLVIAVDMRQMNRILWVDPVNRMACIEAGA
TGRHLMEELAKFGFTMGHEPDSLEFSTLGGWIATNASGMKKNRYGNIEDLVLDMQVVTPQGIVERPRQAPRESVGVNPRQ
YMFGSEGNFGIVTTAVVKLFPLPEVQRYGSVIFPDLETGLSFLYALQQSGAVPASVRVMDNTQFHFGQALKPAKHGLAAK
VKSEVEKAVVTKLKGFDPYKLAVATLVFEGSREEVAFQEKTVYRIASEHGGMKGGGANGERGYQLTFGIAYIRDLTFEHW
AIAESFETSVPWSRAMDLYERVQRRVEKEHAALGLPGKVFFTGRFTQVYQTGVAIYFYLGFYARGVSDPVGAYAALEHAA
REEILAAGGSLSHHHGVGKIRRDFLPEVYSEAALALNRKVKAAIDPDNVFGASNCGINGPVALTPDEEAH

Specific function: Unknown

COG id: COG0277

COG function: function code C; FAD/FMN-containing dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAD-binding PCMH-type domain [H]

Homologues:

Organism=Homo sapiens, GI4501993, Length=576, Percent_Identity=45.6597222222222, Blast_Score=546, Evalue=1e-155,
Organism=Homo sapiens, GI37595756, Length=454, Percent_Identity=24.2290748898678, Blast_Score=102, Evalue=2e-21,
Organism=Homo sapiens, GI37595754, Length=477, Percent_Identity=23.0607966457023, Blast_Score=91, Evalue=2e-18,
Organism=Homo sapiens, GI119964728, Length=183, Percent_Identity=28.9617486338798, Blast_Score=71, Evalue=2e-12,
Organism=Escherichia coli, GI48994907, Length=471, Percent_Identity=25.9023354564756, Blast_Score=117, Evalue=3e-27,
Organism=Escherichia coli, GI1789351, Length=254, Percent_Identity=25.1968503937008, Blast_Score=76, Evalue=5e-15,
Organism=Escherichia coli, GI1787977, Length=155, Percent_Identity=34.1935483870968, Blast_Score=65, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI17556096, Length=565, Percent_Identity=43.8938053097345, Blast_Score=518, Evalue=1e-147,
Organism=Caenorhabditis elegans, GI71992373, Length=464, Percent_Identity=22.198275862069, Blast_Score=87, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI71992381, Length=460, Percent_Identity=22.1739130434783, Blast_Score=87, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI17534361, Length=182, Percent_Identity=24.1758241758242, Blast_Score=70, Evalue=4e-12,
Organism=Saccharomyces cerevisiae, GI6320027, Length=280, Percent_Identity=27.8571428571429, Blast_Score=100, Evalue=7e-22,
Organism=Saccharomyces cerevisiae, GI6320023, Length=335, Percent_Identity=24.1791044776119, Blast_Score=80, Evalue=1e-15,
Organism=Saccharomyces cerevisiae, GI6320764, Length=170, Percent_Identity=28.2352941176471, Blast_Score=79, Evalue=3e-15,
Organism=Drosophila melanogaster, GI24653753, Length=624, Percent_Identity=42.6282051282051, Blast_Score=484, Evalue=1e-137,
Organism=Drosophila melanogaster, GI18921117, Length=454, Percent_Identity=23.568281938326, Blast_Score=84, Evalue=3e-16,
Organism=Drosophila melanogaster, GI24639277, Length=454, Percent_Identity=23.568281938326, Blast_Score=84, Evalue=3e-16,
Organism=Drosophila melanogaster, GI24639275, Length=454, Percent_Identity=23.568281938326, Blast_Score=84, Evalue=3e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016166
- InterPro:   IPR016167
- InterPro:   IPR016164
- InterPro:   IPR016168
- InterPro:   IPR004113
- InterPro:   IPR006094
- InterPro:   IPR016171 [H]

Pfam domain/function: PF02913 FAD-oxidase_C; PF01565 FAD_binding_4 [H]

EC number: 2.5.1.26

Molecular weight: Translated: 69304; Mature: 69172

Theoretical pI: Translated: 7.00; Mature: 7.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKQSGLLRRLGNVALNEVSERFGSTSPTPSSGDTRFTPPTPAASKDEESLEGWGFADTR
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCE
FVVKPDGSTVLTGTRYNISNVALPDLMQWFAGKLASPLGYDNRNEPHYPPEIPAAKKNDK
EEECCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCH
LVAALREFLKEEQLTDDPKQRLRRGHGHTGGEIWAIRYGKLDRVPDLVVFPRGHDEVVRL
HHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCEEEEEEECCCCCCCCEEEECCCHHHHHHH
VEVATQHGACVIPFGGGTNVTEALRIPLSEERLVIAVDMRQMNRILWVDPVNRMACIEAG
HHHHHCCCCEEEECCCCCCHHHHHCCCCCCCCEEEEEEHHHCCCEEEECCCCCEEHEECC
ATGRHLMEELAKFGFTMGHEPDSLEFSTLGGWIATNASGMKKNRYGNIEDLVLDMQVVTP
CCHHHHHHHHHHCCCCCCCCCCCCCHHHCCCEEECCCCCCCCCCCCCHHHHEEEEEEECC
QGIVERPRQAPRESVGVNPRQYMFGSEGNFGIVTTAVVKLFPLPEVQRYGSVIFPDLETG
CHHHHCHHHCCHHHCCCCHHHEEECCCCCCCHHHHHHHHHCCCHHHHHCCCEECCCHHHH
LSFLYALQQSGAVPASVRVMDNTQFHFGQALKPAKHGLAAKVKSEVEKAVVTKLKGFDPY
HHHHHHHHHCCCCCEEEEEECCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCHH
KLAVATLVFEGSREEVAFQEKTVYRIASEHGGMKGGGANGERGYQLTFGIAYIRDLTFEH
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEHHHHHHHHCHHH
WAIAESFETSVPWSRAMDLYERVQRRVEKEHAALGLPGKVFFTGRFTQVYQTGVAIYFYL
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHH
GFYARGVSDPVGAYAALEHAAREEILAAGGSLSHHHGVGKIRRDFLPEVYSEAALALNRK
HHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHCCC
VKAAIDPDNVFGASNCGINGPVALTPDEEAH
CEEEECCCCCCCCCCCCCCCCEEECCCCCCC
>Mature Secondary Structure 
AKQSGLLRRLGNVALNEVSERFGSTSPTPSSGDTRFTPPTPAASKDEESLEGWGFADTR
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCE
FVVKPDGSTVLTGTRYNISNVALPDLMQWFAGKLASPLGYDNRNEPHYPPEIPAAKKNDK
EEECCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCH
LVAALREFLKEEQLTDDPKQRLRRGHGHTGGEIWAIRYGKLDRVPDLVVFPRGHDEVVRL
HHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCEEEEEEECCCCCCCCEEEECCCHHHHHHH
VEVATQHGACVIPFGGGTNVTEALRIPLSEERLVIAVDMRQMNRILWVDPVNRMACIEAG
HHHHHCCCCEEEECCCCCCHHHHHCCCCCCCCEEEEEEHHHCCCEEEECCCCCEEHEECC
ATGRHLMEELAKFGFTMGHEPDSLEFSTLGGWIATNASGMKKNRYGNIEDLVLDMQVVTP
CCHHHHHHHHHHCCCCCCCCCCCCCHHHCCCEEECCCCCCCCCCCCCHHHHEEEEEEECC
QGIVERPRQAPRESVGVNPRQYMFGSEGNFGIVTTAVVKLFPLPEVQRYGSVIFPDLETG
CHHHHCHHHCCHHHCCCCHHHEEECCCCCCCHHHHHHHHHCCCHHHHHCCCEECCCHHHH
LSFLYALQQSGAVPASVRVMDNTQFHFGQALKPAKHGLAAKVKSEVEKAVVTKLKGFDPY
HHHHHHHHHCCCCCEEEEEECCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCHH
KLAVATLVFEGSREEVAFQEKTVYRIASEHGGMKGGGANGERGYQLTFGIAYIRDLTFEH
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEHHHHHHHHCHHH
WAIAESFETSVPWSRAMDLYERVQRRVEKEHAALGLPGKVFFTGRFTQVYQTGVAIYFYL
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHH
GFYARGVSDPVGAYAALEHAAREEILAAGGSLSHHHGVGKIRRDFLPEVYSEAALALNRK
HHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHCCC
VKAAIDPDNVFGASNCGINGPVALTPDEEAH
CEEEECCCCCCCCCCCCCCCCEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: 1-acyl-glycerone 3-phosphate; long-chain alcohol

Specific reaction: 1-acyl-glycerone 3-phosphate + a long-chain alcohol = an alkyl-glycerone 3-phosphate + a long-chain acid anion

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]