| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is flhB [H]
Identifier: 108758626
GI number: 108758626
Start: 2856390
End: 2857469
Strand: Direct
Name: flhB [H]
Synonym: MXAN_2450
Alternate gene names: 108758626
Gene position: 2856390-2857469 (Clockwise)
Preceding gene: 108758221
Following gene: 108762856
Centisome position: 31.25
GC content: 64.07
Gene sequence:
>1080_bases ATGTCGGACGAGAGCGGCGAAAAAACAGAAGAGCCATCCCAGAAGAAGCTGGATGACTCACGCAAGAAGGGGCAGGTCTG GAAGAGCAAGGACCTCAGCGGCGTGGGCGTGCTCCTGGTGGGGCTGGCCGCCGTCAAAGGCAGCTGGGACATGCTGGAGA CAGAGCTGACGTCGCTCTTCCTGTTCTCCTTCGACCACCTGACGAACCCGGTGGACCTGTCGGTGGCCACCGGGCAGCTG CTCTTCCTGGGGCTGCGCGCGGTGGTGCTGGTGTCGCTGCCGGTGCTGGCGGGCGGAGCCATTGTCGGCGGGCTGATGGA GTACCTCCAGGTGGGGACGCTCTTCACCATGGATCCGCTGATTCCGAAGATGGAGAAGCTCAATCCCATCCAAGGCATGA AGAACCTGTTCAACAAGAAGGCGATTGTTGAACTGCTGAAGAACCTCATCAAAATCTCAGTCACCGCCTACGTCGTCTAC GGCGTGGTGCGCGACTCCATGCCCATGGTGGCCGAAACGTTGCGGCAGGACACGCGCGGCATCATGGCCATCATGGGAGA GCTGGTGACGCGCGTGGCCACGCGGGTGGCGCTCCTCTTCGTCCTCTTCGGCGTCTTCGACGTCTGGTGGCAGCGCAAGT CCTTCATGAAGGACATGATGATGACGAAGGAGGAGGTGAAGAAGGAGTACAAGCAGAGCGAGGGCGACCCGCACCACAAG GCCAAGCGCAAGGAGATGCATCAGGAGATCATGGAGGGGGCGCAGATGGAGGCCGTGCGCGAGGCCGACGTCATCGTCAC CAACCCGGACCACGTGGCGGTGGCCCTCAAGTACGACCGGGAGAAGGACGGCGCGCCGCGCGTGCTGGCCCGGGGCATCG ACTTCAAGGCCGAGCGCATCAAGGCCATTGCCCGCGAGCAGGACGTGCCCACGCTGCGCAACGTGCCCCTGGCCCACGCC CTGCTGCGGGTGGAGGTGGGGCACGAAGTCCCGGAGGAGCTGTACGACGCGGTCGCCGAGGTCCTCAACTTCGTCTACGG CTTGAAGTCCGGTCAGCCAGCCCCCGAGGGCCGCGCGTGA
Upstream 100 bases:
>100_bases GCCCTGATGGACCGCATGCAGGGGGAGATGGTCGTCATGCTGCGGACCCTCAACCAAGCCCTGCGGCTCTTGTCCTGAGC CTCTTCATCCGGGACGCGCC
Downstream 100 bases:
>100_bases GGAGGCCGGGTGTGGCTATCATGCAGGGACAACGGGGCCTTCCATGAGTGACGACGCCGAAATCGCCATCGCGTTGAAGT ACGACAAGGAGAAGGACGGC
Product: FlhB/HrpN/YscU/SpaS family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 359; Mature: 358
Protein sequence:
>359_residues MSDESGEKTEEPSQKKLDDSRKKGQVWKSKDLSGVGVLLVGLAAVKGSWDMLETELTSLFLFSFDHLTNPVDLSVATGQL LFLGLRAVVLVSLPVLAGGAIVGGLMEYLQVGTLFTMDPLIPKMEKLNPIQGMKNLFNKKAIVELLKNLIKISVTAYVVY GVVRDSMPMVAETLRQDTRGIMAIMGELVTRVATRVALLFVLFGVFDVWWQRKSFMKDMMMTKEEVKKEYKQSEGDPHHK AKRKEMHQEIMEGAQMEAVREADVIVTNPDHVAVALKYDREKDGAPRVLARGIDFKAERIKAIAREQDVPTLRNVPLAHA LLRVEVGHEVPEELYDAVAEVLNFVYGLKSGQPAPEGRA
Sequences:
>Translated_359_residues MSDESGEKTEEPSQKKLDDSRKKGQVWKSKDLSGVGVLLVGLAAVKGSWDMLETELTSLFLFSFDHLTNPVDLSVATGQL LFLGLRAVVLVSLPVLAGGAIVGGLMEYLQVGTLFTMDPLIPKMEKLNPIQGMKNLFNKKAIVELLKNLIKISVTAYVVY GVVRDSMPMVAETLRQDTRGIMAIMGELVTRVATRVALLFVLFGVFDVWWQRKSFMKDMMMTKEEVKKEYKQSEGDPHHK AKRKEMHQEIMEGAQMEAVREADVIVTNPDHVAVALKYDREKDGAPRVLARGIDFKAERIKAIAREQDVPTLRNVPLAHA LLRVEVGHEVPEELYDAVAEVLNFVYGLKSGQPAPEGRA >Mature_358_residues SDESGEKTEEPSQKKLDDSRKKGQVWKSKDLSGVGVLLVGLAAVKGSWDMLETELTSLFLFSFDHLTNPVDLSVATGQLL FLGLRAVVLVSLPVLAGGAIVGGLMEYLQVGTLFTMDPLIPKMEKLNPIQGMKNLFNKKAIVELLKNLIKISVTAYVVYG VVRDSMPMVAETLRQDTRGIMAIMGELVTRVATRVALLFVLFGVFDVWWQRKSFMKDMMMTKEEVKKEYKQSEGDPHHKA KRKEMHQEIMEGAQMEAVREADVIVTNPDHVAVALKYDREKDGAPRVLARGIDFKAERIKAIAREQDVPTLRNVPLAHAL LRVEVGHEVPEELYDAVAEVLNFVYGLKSGQPAPEGRA
Specific function: May be involved in the export of flagellum proteins [H]
COG id: COG1377
COG function: function code NU; Flagellar biosynthesis pathway, component FlhB
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the type III secretion exporter family [H]
Homologues:
Organism=Escherichia coli, GI1788188, Length=363, Percent_Identity=35.5371900826446, Blast_Score=194, Evalue=1e-50,
Paralogues:
None
Copy number: 10-20 (rich media) [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006136 - InterPro: IPR006135 [H]
Pfam domain/function: PF01312 Bac_export_2 [H]
EC number: NA
Molecular weight: Translated: 39973; Mature: 39842
Theoretical pI: Translated: 6.91; Mature: 6.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDESGEKTEEPSQKKLDDSRKKGQVWKSKDLSGVGVLLVGLAAVKGSWDMLETELTSLF CCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHH LFSFDHLTNPVDLSVATGQLLFLGLRAVVLVSLPVLAGGAIVGGLMEYLQVGTLFTMDPL HHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCHH IPKMEKLNPIQGMKNLFNKKAIVELLKNLIKISVTAYVVYGVVRDSMPMVAETLRQDTRG HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH IMAIMGELVTRVATRVALLFVLFGVFDVWWQRKSFMKDMMMTKEEVKKEYKQSEGDPHHK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH AKRKEMHQEIMEGAQMEAVREADVIVTNPDHVAVALKYDREKDGAPRVLARGIDFKAERI HHHHHHHHHHHCCHHHHHHHHCCEEEECCCCEEEEEEECCCCCCCHHHHHHCCCHHHHHH KAIAREQDVPTLRNVPLAHALLRVEVGHEVPEELYDAVAEVLNFVYGLKSGQPAPEGRA HHHHHHCCCCHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure SDESGEKTEEPSQKKLDDSRKKGQVWKSKDLSGVGVLLVGLAAVKGSWDMLETELTSLF CCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHH LFSFDHLTNPVDLSVATGQLLFLGLRAVVLVSLPVLAGGAIVGGLMEYLQVGTLFTMDPL HHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCHH IPKMEKLNPIQGMKNLFNKKAIVELLKNLIKISVTAYVVYGVVRDSMPMVAETLRQDTRG HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH IMAIMGELVTRVATRVALLFVLFGVFDVWWQRKSFMKDMMMTKEEVKKEYKQSEGDPHHK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH AKRKEMHQEIMEGAQMEAVREADVIVTNPDHVAVALKYDREKDGAPRVLARGIDFKAERI HHHHHHHHHHHCCHHHHHHHHCCEEEECCCCEEEEEEECCCCCCCHHHHHHCCCHHHHHH KAIAREQDVPTLRNVPLAHALLRVEVGHEVPEELYDAVAEVLNFVYGLKSGQPAPEGRA HHHHHHCCCCHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8299954; 9384377 [H]