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The map label for this gene is fliR [H]

Identifier: 108758221

GI number: 108758221

Start: 2855549

End: 2856367

Strand: Direct

Name: fliR [H]

Synonym: MXAN_2449

Alternate gene names: 108758221

Gene position: 2855549-2856367 (Clockwise)

Preceding gene: 108757472

Following gene: 108758626

Centisome position: 31.24

GC content: 65.45

Gene sequence:

>819_bases
ATGAACGTCGCGGACCTCGTCGCAGAGCTGGGCACCCGGGCCAACGTCTCGGCCGTCATCTTCACGGTGGCGCTGGTGAT
GTGCCGGGTGATGCCCGTGCTCATCTTCAGCCCCTTCCTGGGCGGCGAGGTGGTCCCCACCGAGCTGAAGATGGGCATCG
GGCTGACGCTCTCAATCGTCCTCTACCCCCTCATCGCGGGCTCGGTGACGTCCATCCCCCTGAGCGCTTTGCCGTACATC
GCGCTGATGGCGAAGGAGGTGTTCGTCGGCTTCACCATCGCCTTCGTCGTCAACACGTTGTTCGAAGCCGCGCGCGTGGC
CGGCAACCTGGTGGACACCATGTCCGGCAGCAACAACGCGCAGCTGTACGTGCCTCAGCTCGGGCAGCAGGTGACGCTGT
TCTCCAGCTTCAAGGTGCAGTTGGCGGTGGTGTTGTTCCTCACGCTGAACGGGCACCACCTGGTCATCGAAGCGCTGGCG
GACAGCTTGGTGGCGGTGCCGCTGGACGGCTTCCCGCGCTTCCACGACGGGCCGTGGCCCTTCTTCGACCTGATGATTCG
TGTGTTCGCGGACCTGCTCCGGGTGAGCCTGGCGCTGGCCGCTCCGGCGATGCTGGCGACCTTCCTCACCGACGTGGCGC
TGGGCGCCATCAACCGCGTGGCGCCGCAAATCCAGGTGTTCTTCATCTCCATGTCCGTCAAGCCCCTGGTGAGCGTGCTG
CTCGTCTTCCTGGTGCTCGGCGCCCTGATGGACCGCATGCAGGGGGAGATGGTCGTCATGCTGCGGACCCTCAACCAAGC
CCTGCGGCTCTTGTCCTGA

Upstream 100 bases:

>100_bases
TCGCCGTGTTCGGCGTCCTCGCATTGGCCGGCCCCTGGATTGGAAGCCAGTTGGTGCGCTTCACGTTCCACGTCTTCGAC
AGGTTCCCCGCGCTCATCAA

Downstream 100 bases:

>100_bases
GCCTCTTCATCCGGGACGCGCCATGTCGGACGAGAGCGGCGAAAAAACAGAAGAGCCATCCCAGAAGAAGCTGGATGACT
CACGCAAGAAGGGGCAGGTC

Product: FliR/MopE/SpaR family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 272; Mature: 272

Protein sequence:

>272_residues
MNVADLVAELGTRANVSAVIFTVALVMCRVMPVLIFSPFLGGEVVPTELKMGIGLTLSIVLYPLIAGSVTSIPLSALPYI
ALMAKEVFVGFTIAFVVNTLFEAARVAGNLVDTMSGSNNAQLYVPQLGQQVTLFSSFKVQLAVVLFLTLNGHHLVIEALA
DSLVAVPLDGFPRFHDGPWPFFDLMIRVFADLLRVSLALAAPAMLATFLTDVALGAINRVAPQIQVFFISMSVKPLVSVL
LVFLVLGALMDRMQGEMVVMLRTLNQALRLLS

Sequences:

>Translated_272_residues
MNVADLVAELGTRANVSAVIFTVALVMCRVMPVLIFSPFLGGEVVPTELKMGIGLTLSIVLYPLIAGSVTSIPLSALPYI
ALMAKEVFVGFTIAFVVNTLFEAARVAGNLVDTMSGSNNAQLYVPQLGQQVTLFSSFKVQLAVVLFLTLNGHHLVIEALA
DSLVAVPLDGFPRFHDGPWPFFDLMIRVFADLLRVSLALAAPAMLATFLTDVALGAINRVAPQIQVFFISMSVKPLVSVL
LVFLVLGALMDRMQGEMVVMLRTLNQALRLLS
>Mature_272_residues
MNVADLVAELGTRANVSAVIFTVALVMCRVMPVLIFSPFLGGEVVPTELKMGIGLTLSIVLYPLIAGSVTSIPLSALPYI
ALMAKEVFVGFTIAFVVNTLFEAARVAGNLVDTMSGSNNAQLYVPQLGQQVTLFSSFKVQLAVVLFLTLNGHHLVIEALA
DSLVAVPLDGFPRFHDGPWPFFDLMIRVFADLLRVSLALAAPAMLATFLTDVALGAINRVAPQIQVFFISMSVKPLVSVL
LVFLVLGALMDRMQGEMVVMLRTLNQALRLLS

Specific function: Role in flagellar biosynthesis [H]

COG id: COG1684

COG function: function code NU; Flagellar biosynthesis pathway, component FliR

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential). Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliR/mopE/spaR family [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006303
- InterPro:   IPR002010 [H]

Pfam domain/function: PF01311 Bac_export_1 [H]

EC number: NA

Molecular weight: Translated: 29277; Mature: 29277

Theoretical pI: Translated: 6.25; Mature: 6.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNVADLVAELGTRANVSAVIFTVALVMCRVMPVLIFSPFLGGEVVPTELKMGIGLTLSIV
CCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCHHHHHH
LYPLIAGSVTSIPLSALPYIALMAKEVFVGFTIAFVVNTLFEAARVAGNLVDTMSGSNNA
HHHHHHCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
QLYVPQLGQQVTLFSSFKVQLAVVLFLTLNGHHLVIEALADSLVAVPLDGFPRFHDGPWP
EEEECCCCCEEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHEECCCCCCCCCCCCCCC
FFDLMIRVFADLLRVSLALAAPAMLATFLTDVALGAINRVAPQIQVFFISMSVKPLVSVL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHEEEEEECCHHHHHHHH
LVFLVLGALMDRMQGEMVVMLRTLNQALRLLS
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNVADLVAELGTRANVSAVIFTVALVMCRVMPVLIFSPFLGGEVVPTELKMGIGLTLSIV
CCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCHHHHHH
LYPLIAGSVTSIPLSALPYIALMAKEVFVGFTIAFVVNTLFEAARVAGNLVDTMSGSNNA
HHHHHHCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
QLYVPQLGQQVTLFSSFKVQLAVVLFLTLNGHHLVIEALADSLVAVPLDGFPRFHDGPWP
EEEECCCCCEEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHEECCCCCCCCCCCCCCC
FFDLMIRVFADLLRVSLALAAPAMLATFLTDVALGAINRVAPQIQVFFISMSVKPLVSVL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHEEEEEECCHHHHHHHH
LVFLVLGALMDRMQGEMVVMLRTLNQALRLLS
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8299954; 9384377 [H]