| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is flhB [H]
Identifier: 108762856
GI number: 108762856
Start: 2857513
End: 2857797
Strand: Direct
Name: flhB [H]
Synonym: MXAN_2451
Alternate gene names: 108762856
Gene position: 2857513-2857797 (Clockwise)
Preceding gene: 108758626
Following gene: 108763965
Centisome position: 31.26
GC content: 64.21
Gene sequence:
>285_bases ATGAGTGACGACGCCGAAATCGCCATCGCGTTGAAGTACGACAAGGAGAAGGACGGCGCGCCGCGCGTGGTGGCCAAGGG CATGCGGCTCAAGGCGGAGAAGATTCGCGAGATTGCCCGCGAGCACAACATCCCCCTCATGCGGAACGTGAACCTGGCCA ATGCGCTCTACCGCGTGGAGGTGGGCCAGGAGGTCCCCGAGGAGTTGTATGACGCCGTGGCCGAGGTCCTGAACTTCGTC TACGAGCTACAACGTGAGCAGGCGGCCGCGGCTGCCAGGCGCTAG
Upstream 100 bases:
>100_bases CTCAACTTCGTCTACGGCTTGAAGTCCGGTCAGCCAGCCCCCGAGGGCCGCGCGTGAGGAGGCCGGGTGTGGCTATCATG CAGGGACAACGGGGCCTTCC
Downstream 100 bases:
>100_bases GGGGGCTGGACGTCCCCCACCCATCTGGAGTGAGGTTCGGTATCACGATGGCCAGAATCAACAATCCGCCTCCGAATACG TCCCTGTGGCCCTGGGGCGG
Product: FlhB/HrpN/YscU/SpaS family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 94; Mature: 93
Protein sequence:
>94_residues MSDDAEIAIALKYDKEKDGAPRVVAKGMRLKAEKIREIAREHNIPLMRNVNLANALYRVEVGQEVPEELYDAVAEVLNFV YELQREQAAAAARR
Sequences:
>Translated_94_residues MSDDAEIAIALKYDKEKDGAPRVVAKGMRLKAEKIREIAREHNIPLMRNVNLANALYRVEVGQEVPEELYDAVAEVLNFV YELQREQAAAAARR >Mature_93_residues SDDAEIAIALKYDKEKDGAPRVVAKGMRLKAEKIREIAREHNIPLMRNVNLANALYRVEVGQEVPEELYDAVAEVLNFVY ELQREQAAAAARR
Specific function: Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with fliI and fliH, may constitute the export apparatus of flagellin [H]
COG id: COG1377
COG function: function code NU; Flagellar biosynthesis pathway, component FlhB
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the type III secretion exporter family [H]
Homologues:
Organism=Escherichia coli, GI1788188, Length=87, Percent_Identity=50.5747126436782, Blast_Score=85, Evalue=1e-18,
Paralogues:
None
Copy number: 10-20 (rich media) [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006136 - InterPro: IPR006135 [H]
Pfam domain/function: PF01312 Bac_export_2 [H]
EC number: NA
Molecular weight: Translated: 10653; Mature: 10522
Theoretical pI: Translated: 5.24; Mature: 5.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDDAEIAIALKYDKEKDGAPRVVAKGMRLKAEKIREIAREHNIPLMRNVNLANALYRVE CCCCCCEEEEEEECCCCCCCCHHHHHCCCCCHHHHHHHHHHCCCCCEECCHHHHHHHHHH VGQEVPEELYDAVAEVLNFVYELQREQAAAAARR HCHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SDDAEIAIALKYDKEKDGAPRVVAKGMRLKAEKIREIAREHNIPLMRNVNLANALYRVE CCCCCEEEEEEECCCCCCCCHHHHHCCCCCHHHHHHHHHHCCCCCEECCHHHHHHHHHH VGQEVPEELYDAVAEVLNFVYELQREQAAAAARR HCHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8002587; 11677609; 3298217 [H]