| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108758081
Identifier: 108758081
GI number: 108758081
Start: 902622
End: 904082
Strand: Direct
Name: 108758081
Synonym: MXAN_0792
Alternate gene names: NA
Gene position: 902622-904082 (Clockwise)
Preceding gene: 108756807
Following gene: 108757093
Centisome position: 9.88
GC content: 70.43
Gene sequence:
>1461_bases ATGAGCGCCCCCCTCTCCTGGAAGGCCGCGTTCACCACGCTGCTGCTGTCCTCCGTCCCCGCCGCGGCCCAGGGCTCCGC CGCTGCTCCGAAGCCCGCCACGGCGGCTCCGGCGCAGCAGGGCGTGACGCTCCCCAAGGCCACCACCGTCACGCTGAAGA ACGGCGCGAAGCTCCAGCTCGTGGAGCGCAAGGAGCTGCCGCTCGTCTCGTTCAGTGCGTGGGTGCGCGGCGGCGCCCTG GGTGACCCCGCTGGCAAGGAAGGCCTGGCCGCGCTCACCGGTGAGCTGCTGCAGAAGGGTGCCGGCGGCCGTGACGCGCG CCAGTTCGCCGAGGCCGTGGACGGCGTGGGCGGCGAGCTGCAGGTGGCCGCCAACCTGGAGGCCCTGGTCATCAGCGGCC AGTTCATGTCGCGCGACACCGGGCTGATGGTGGAGCTGCTCACCGACATGCTCACGCGCCCGCGCTTCGACGCGAAGGAG CTGGAGAAGGTCCGCGCGCGCAAGGCCTCTGAGATCGCCGCCGCGAAGGATGGCGACCCGCGCATGCTGATTGGCGCGTA CTTCCAGGCCTTCCATTTCGCCGGGCACCCGTATGGCACGCCTGTCAACGGCAGCGAGGCGTCGCTGCCCGGCCTGTCCC GCGAGGACGTGCTCGCGTACGCGAAGAACCACCTGGGCGCGGACCGGCTCGTCCTGTCCGTGGTGGGTGACTTCGACGCG AAGGCGCTCGCGAAGAAGCTGGAGTCCTCGCTCGGCGGCTGGGCGCGCGCCGCCACGCCCGCGCCCACCGTGCCCGCCAC CGCCGCCTCCAAGGGCCGGCGCGTGCTGCTGGTGGACAAGCCGGACGCCACCCAGACGTACTTCTGGATTGGCAACACCG GTATCTCCCGCGATGACCCGGACCGGGCCTCGGTGCGGGTCGCGGAGACGGTGTTCGGTGGACGCTTCACCTCGCTGCTC AACACGGAGCTGCGCGTGAAGTCCGGCCTCAGCTACGGCGCCAACTCCGTGTTCATCCGTCACACGCGTCCGGGGCCCGT CATCATCGCCTCGTACACGAAGACGGAGTCCACCGGCCGCGCCATCGACCTGGCGCTGGAGACGCTCGCCGGCTACCGGA AGTCCGGCATGGATGACGCCATGCTCGCCTCCGCGAAGTCGTATGTGCTGGGGCAGTTCCCGCCCACGCTGGAGACCGGG ACGCAGGTGGCCGGCAAGCTGTCGGAGCTGGCCTTCTATGGCCTGGATGCCAGCGACGTGGATGGTTTCGCCAGCGCCGT CTCCGCCACGACCCGCGAGGGCGTGCACGGCATCATCCAGCGCAAGCTCCCCGCGCCGGAGGACCTCACCTTCGTCCTCA TCGGCAAGGCGTCGGACATCCGTGAGGCGGCTCGCAAGTACGGCACCGTCACGGAGATGAAGATTTCCGACAAGCACTTC GCGCCGCCCGCGAAGCGCTGA
Upstream 100 bases:
>100_bases TCGCCGCGCGCATCTTCAACTCGCAGCGCCGCACCGTTGGTTGGCTCGTGCCCGCCGACGCGCAGGCCGCCACCCCCGAC TCCCGCAAGGAGGCCTCGCG
Downstream 100 bases:
>100_bases GACTCGCCGCGCACCGCCGGACCTGGAGGTTGTCGGGCCGGCGGTGCCTTCGGGGCGGAATCCTCTGTCCCGAACGCAGC CCATCTGGCCGCCCAGCAGG
Product: M16 family peptidase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 486; Mature: 485
Protein sequence:
>486_residues MSAPLSWKAAFTTLLLSSVPAAAQGSAAAPKPATAAPAQQGVTLPKATTVTLKNGAKLQLVERKELPLVSFSAWVRGGAL GDPAGKEGLAALTGELLQKGAGGRDARQFAEAVDGVGGELQVAANLEALVISGQFMSRDTGLMVELLTDMLTRPRFDAKE LEKVRARKASEIAAAKDGDPRMLIGAYFQAFHFAGHPYGTPVNGSEASLPGLSREDVLAYAKNHLGADRLVLSVVGDFDA KALAKKLESSLGGWARAATPAPTVPATAASKGRRVLLVDKPDATQTYFWIGNTGISRDDPDRASVRVAETVFGGRFTSLL NTELRVKSGLSYGANSVFIRHTRPGPVIIASYTKTESTGRAIDLALETLAGYRKSGMDDAMLASAKSYVLGQFPPTLETG TQVAGKLSELAFYGLDASDVDGFASAVSATTREGVHGIIQRKLPAPEDLTFVLIGKASDIREAARKYGTVTEMKISDKHF APPAKR
Sequences:
>Translated_486_residues MSAPLSWKAAFTTLLLSSVPAAAQGSAAAPKPATAAPAQQGVTLPKATTVTLKNGAKLQLVERKELPLVSFSAWVRGGAL GDPAGKEGLAALTGELLQKGAGGRDARQFAEAVDGVGGELQVAANLEALVISGQFMSRDTGLMVELLTDMLTRPRFDAKE LEKVRARKASEIAAAKDGDPRMLIGAYFQAFHFAGHPYGTPVNGSEASLPGLSREDVLAYAKNHLGADRLVLSVVGDFDA KALAKKLESSLGGWARAATPAPTVPATAASKGRRVLLVDKPDATQTYFWIGNTGISRDDPDRASVRVAETVFGGRFTSLL NTELRVKSGLSYGANSVFIRHTRPGPVIIASYTKTESTGRAIDLALETLAGYRKSGMDDAMLASAKSYVLGQFPPTLETG TQVAGKLSELAFYGLDASDVDGFASAVSATTREGVHGIIQRKLPAPEDLTFVLIGKASDIREAARKYGTVTEMKISDKHF APPAKR >Mature_485_residues SAPLSWKAAFTTLLLSSVPAAAQGSAAAPKPATAAPAQQGVTLPKATTVTLKNGAKLQLVERKELPLVSFSAWVRGGALG DPAGKEGLAALTGELLQKGAGGRDARQFAEAVDGVGGELQVAANLEALVISGQFMSRDTGLMVELLTDMLTRPRFDAKEL EKVRARKASEIAAAKDGDPRMLIGAYFQAFHFAGHPYGTPVNGSEASLPGLSREDVLAYAKNHLGADRLVLSVVGDFDAK ALAKKLESSLGGWARAATPAPTVPATAASKGRRVLLVDKPDATQTYFWIGNTGISRDDPDRASVRVAETVFGGRFTSLLN TELRVKSGLSYGANSVFIRHTRPGPVIIASYTKTESTGRAIDLALETLAGYRKSGMDDAMLASAKSYVLGQFPPTLETGT QVAGKLSELAFYGLDASDVDGFASAVSATTREGVHGIIQRKLPAPEDLTFVLIGKASDIREAARKYGTVTEMKISDKHFA PPAKR
Specific function: Unknown
COG id: COG0612
COG function: function code R; Predicted Zn-dependent peptidases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M16 family [H]
Homologues:
Organism=Homo sapiens, GI46593007, Length=234, Percent_Identity=25.6410256410256, Blast_Score=74, Evalue=3e-13, Organism=Caenorhabditis elegans, GI17553678, Length=195, Percent_Identity=24.6153846153846, Blast_Score=69, Evalue=6e-12, Organism=Drosophila melanogaster, GI21357875, Length=284, Percent_Identity=23.943661971831, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI24646943, Length=284, Percent_Identity=23.943661971831, Blast_Score=70, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011249 - InterPro: IPR011237 - InterPro: IPR007863 [H]
Pfam domain/function: PF05193 Peptidase_M16_C [H]
EC number: NA
Molecular weight: Translated: 51139; Mature: 51008
Theoretical pI: Translated: 9.89; Mature: 9.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAPLSWKAAFTTLLLSSVPAAAQGSAAAPKPATAAPAQQGVTLPKATTVTLKNGAKLQL CCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHCCCCCCCEEEEEECCCCEEEE VERKELPLVSFSAWVRGGALGDPAGKEGLAALTGELLQKGAGGRDARQFAEAVDGVGGEL EECCCCCEEEHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCE QVAANLEALVISGQFMSRDTGLMVELLTDMLTRPRFDAKELEKVRARKASEIAAAKDGDP EEECCCEEEEEECCHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCC RMLIGAYFQAFHFAGHPYGTPVNGSEASLPGLSREDVLAYAKNHLGADRLVLSVVGDFDA CCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHCCCCH KALAKKLESSLGGWARAATPAPTVPATAASKGRRVLLVDKPDATQTYFWIGNTGISRDDP HHHHHHHHHHHCCCEECCCCCCCCCCCHHCCCCEEEEEECCCCCEEEEEEECCCCCCCCC DRASVRVAETVFGGRFTSLLNTELRVKSGLSYGANSVFIRHTRPGPVIIASYTKTESTGR CHHHEEHHHHHHCCHHHHHHCCHHHHHCCCCCCCCEEEEEECCCCCEEEEEECCCCCCCC AIDLALETLAGYRKSGMDDAMLASAKSYVLGQFPPTLETGTQVAGKLSELAFYGLDASDV HHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHEECCCCHHH DGFASAVSATTREGVHGIIQRKLPAPEDLTFVLIGKASDIREAARKYGTVTEMKISDKHF HHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCHHHHHHHHHHCCEEEEEECCCCC APPAKR CCCCCC >Mature Secondary Structure SAPLSWKAAFTTLLLSSVPAAAQGSAAAPKPATAAPAQQGVTLPKATTVTLKNGAKLQL CCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHCCCCCCCEEEEEECCCCEEEE VERKELPLVSFSAWVRGGALGDPAGKEGLAALTGELLQKGAGGRDARQFAEAVDGVGGEL EECCCCCEEEHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCE QVAANLEALVISGQFMSRDTGLMVELLTDMLTRPRFDAKELEKVRARKASEIAAAKDGDP EEECCCEEEEEECCHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCC RMLIGAYFQAFHFAGHPYGTPVNGSEASLPGLSREDVLAYAKNHLGADRLVLSVVGDFDA CCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHCCCCH KALAKKLESSLGGWARAATPAPTVPATAASKGRRVLLVDKPDATQTYFWIGNTGISRDDP HHHHHHHHHHHCCCEECCCCCCCCCCCHHCCCCEEEEEECCCCCEEEEEEECCCCCCCCC DRASVRVAETVFGGRFTSLLNTELRVKSGLSYGANSVFIRHTRPGPVIIASYTKTESTGR CHHHEEHHHHHHCCHHHHHHCCHHHHHCCCCCCCCEEEEEECCCCCEEEEEECCCCCCCC AIDLALETLAGYRKSGMDDAMLASAKSYVLGQFPPTLETGTQVAGKLSELAFYGLDASDV HHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHEECCCCHHH DGFASAVSATTREGVHGIIQRKLPAPEDLTFVLIGKASDIREAARKYGTVTEMKISDKHF HHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCHHHHHHHHHHCCEEEEEECCCCC APPAKR CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]