| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is pqqL [C]
Identifier: 108756807
GI number: 108756807
Start: 901171
End: 902625
Strand: Direct
Name: pqqL [C]
Synonym: MXAN_0791
Alternate gene names: 108756807
Gene position: 901171-902625 (Clockwise)
Preceding gene: 108757568
Following gene: 108758081
Centisome position: 9.86
GC content: 68.59
Gene sequence:
>1455_bases GTGCGCCGCCGCCCGTTCCCGGGCGCTCTTCCGACAGGAGCACGGATGTTCCGTCAGTCGTTACTCTGGACCTCGTGTCT GGCCCTGCTCGCCGGCCCCGTGGCCTGTGCGCAGACGCAGGGCGGCAAGCCGGTGGCGAAGTCCGCCGTGTCCGCCGCGC CCAAGCTCGGCGCCGGCATCGAGTCCCGCACCCTCAAGAACGGGCTCAAGGTCATCGTCTGGCCCGACCACGACATTCCC AATGTCGTCCTCTACAACTGGTTCCGCGTCGGCAGCCGGAACGAGTACCCCGGCATCACCGGCCTGTCCCACTTCTTCGA GCACATGATGTTCAACGGTGCGAAGAAGTACGGCCCCGGTGAGTTCGACCGCGTCATGGAGGCCAACGGCGGCGCCAACA ACGCCTTCACCTCCGAGGACGTCACCGTCTACATGGACTGGTTCCCGCGCTCCGCGCTCGACGTCATCTTCGACCTCGAG GCCGACCGGCTCCAGCACCTGGCCATCGACCCCAAGGTCACCGAGTCCGAGCGCGGCGTCGTGTACTCGGAGCGCCGCTC CGCCATCGACAACGACAACATGGGCGCCCTGATGGAGCAGGTGCAGGCCACCGCCTTCGTGGCGCACCCGTACCAGTTCC CCGTCATCGGGTGGCCGTCCGACATCGAGTCGTGGCGCATCGAGGACCTCCAGCGCTACTACAAGACGTACTACGCGCCC AACAACGCCACGCTCATCTTCACCGGCGCCGTGACGCCCGCGGAAATCTTCGCGCTCGCGGAGAAGTACCTGGAGCCCAT CCCCTCCCAGCCCGCGCCGGAGCCCGTCCGCACCAAGGAGCCCGAGCAGCAGGGAGAGCGCCGCATCGTCGTGAAGAAGC AGGCCCAGGCCCCGCTCATCCAACTGGCCTACCACGGCATCTCCGGCAAGGACGCGGACGTGGAAGCGCTCACGTTGCTC CTGAGCATCCTCACCAACGGCGACTCCTCGCGGCTGCACCGCCGCCTCGTCGAGGAGGAGCGCGCCGCCCTCCGCGTCAA CACCCACTTCAGCCCGGGCTTCGACCCCTCGCTCGTCTGGGTCTACGCGGACTTGCCGCCCGGTGCTGACGTCGCCAAGG TGGAAGGCCTGCTCACTGAGGAGCTGGCCCGCGTCGTCAAGGACGGCGTCAGCGACGCCGAGCTCAAGAAGGCGCGCAAC ATCACCCTGTCCCAGTTCTGGCGCAGCCTGGAGACCAACAACGGCCGCGGCCGCGCGCTGGGCGCCGCGGAGACGTTCCG CGGTGACTACCGCCAGCTCTTCGACGCGCCCGACCGCTATGAGCGCGTGACGCGTGACGACGTCCGCAAGGTCGCCGCGC GCATCTTCAACTCGCAGCGCCGCACCGTTGGTTGGCTCGTGCCCGCCGACGCGCAGGCCGCCACCCCCGACTCCCGCAAG GAGGCCTCGCGATGA
Upstream 100 bases:
>100_bases ATCAACTACTTCCAGGAAGTGCTCCGCGAAGTGCTCGGCGCCTGAGTCGCCGCGTCATCCGCCCTCCTGGTCAACCCAGG AGGGTGGCAACTGGAATATC
Downstream 100 bases:
>100_bases GCGCCCCCCTCTCCTGGAAGGCCGCGTTCACCACGCTGCTGCTGTCCTCCGTCCCCGCCGCGGCCCAGGGCTCCGCCGCT GCTCCGAAGCCCGCCACGGC
Product: M16 family peptidase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 484; Mature: 484
Protein sequence:
>484_residues MRRRPFPGALPTGARMFRQSLLWTSCLALLAGPVACAQTQGGKPVAKSAVSAAPKLGAGIESRTLKNGLKVIVWPDHDIP NVVLYNWFRVGSRNEYPGITGLSHFFEHMMFNGAKKYGPGEFDRVMEANGGANNAFTSEDVTVYMDWFPRSALDVIFDLE ADRLQHLAIDPKVTESERGVVYSERRSAIDNDNMGALMEQVQATAFVAHPYQFPVIGWPSDIESWRIEDLQRYYKTYYAP NNATLIFTGAVTPAEIFALAEKYLEPIPSQPAPEPVRTKEPEQQGERRIVVKKQAQAPLIQLAYHGISGKDADVEALTLL LSILTNGDSSRLHRRLVEEERAALRVNTHFSPGFDPSLVWVYADLPPGADVAKVEGLLTEELARVVKDGVSDAELKKARN ITLSQFWRSLETNNGRGRALGAAETFRGDYRQLFDAPDRYERVTRDDVRKVAARIFNSQRRTVGWLVPADAQAATPDSRK EASR
Sequences:
>Translated_484_residues MRRRPFPGALPTGARMFRQSLLWTSCLALLAGPVACAQTQGGKPVAKSAVSAAPKLGAGIESRTLKNGLKVIVWPDHDIP NVVLYNWFRVGSRNEYPGITGLSHFFEHMMFNGAKKYGPGEFDRVMEANGGANNAFTSEDVTVYMDWFPRSALDVIFDLE ADRLQHLAIDPKVTESERGVVYSERRSAIDNDNMGALMEQVQATAFVAHPYQFPVIGWPSDIESWRIEDLQRYYKTYYAP NNATLIFTGAVTPAEIFALAEKYLEPIPSQPAPEPVRTKEPEQQGERRIVVKKQAQAPLIQLAYHGISGKDADVEALTLL LSILTNGDSSRLHRRLVEEERAALRVNTHFSPGFDPSLVWVYADLPPGADVAKVEGLLTEELARVVKDGVSDAELKKARN ITLSQFWRSLETNNGRGRALGAAETFRGDYRQLFDAPDRYERVTRDDVRKVAARIFNSQRRTVGWLVPADAQAATPDSRK EASR >Mature_484_residues MRRRPFPGALPTGARMFRQSLLWTSCLALLAGPVACAQTQGGKPVAKSAVSAAPKLGAGIESRTLKNGLKVIVWPDHDIP NVVLYNWFRVGSRNEYPGITGLSHFFEHMMFNGAKKYGPGEFDRVMEANGGANNAFTSEDVTVYMDWFPRSALDVIFDLE ADRLQHLAIDPKVTESERGVVYSERRSAIDNDNMGALMEQVQATAFVAHPYQFPVIGWPSDIESWRIEDLQRYYKTYYAP NNATLIFTGAVTPAEIFALAEKYLEPIPSQPAPEPVRTKEPEQQGERRIVVKKQAQAPLIQLAYHGISGKDADVEALTLL LSILTNGDSSRLHRRLVEEERAALRVNTHFSPGFDPSLVWVYADLPPGADVAKVEGLLTEELARVVKDGVSDAELKKARN ITLSQFWRSLETNNGRGRALGAAETFRGDYRQLFDAPDRYERVTRDDVRKVAARIFNSQRRTVGWLVPADAQAATPDSRK EASR
Specific function: Unknown
COG id: COG0612
COG function: function code R; Predicted Zn-dependent peptidases
Gene ontology:
Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M16 family [H]
Homologues:
Organism=Homo sapiens, GI94538354, Length=356, Percent_Identity=23.0337078651685, Blast_Score=79, Evalue=7e-15, Organism=Homo sapiens, GI46593007, Length=217, Percent_Identity=27.6497695852535, Blast_Score=79, Evalue=1e-14, Organism=Homo sapiens, GI155969707, Length=236, Percent_Identity=25.8474576271186, Blast_Score=69, Evalue=1e-11, Organism=Escherichia coli, GI1787770, Length=220, Percent_Identity=28.1818181818182, Blast_Score=77, Evalue=3e-15, Organism=Caenorhabditis elegans, GI17553678, Length=426, Percent_Identity=23.0046948356808, Blast_Score=81, Evalue=1e-15, Organism=Caenorhabditis elegans, GI71999683, Length=202, Percent_Identity=28.7128712871287, Blast_Score=79, Evalue=6e-15, Organism=Saccharomyces cerevisiae, GI6323192, Length=405, Percent_Identity=21.4814814814815, Blast_Score=72, Evalue=2e-13, Organism=Drosophila melanogaster, GI21357875, Length=212, Percent_Identity=25.9433962264151, Blast_Score=76, Evalue=5e-14, Organism=Drosophila melanogaster, GI24646943, Length=212, Percent_Identity=25.9433962264151, Blast_Score=76, Evalue=5e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011249 - InterPro: IPR011237 - InterPro: IPR011765 - InterPro: IPR001431 - InterPro: IPR007863 [H]
Pfam domain/function: PF00675 Peptidase_M16; PF05193 Peptidase_M16_C [H]
EC number: 3.4.99.- [C]
Molecular weight: Translated: 53931; Mature: 53931
Theoretical pI: Translated: 7.71; Mature: 7.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRRPFPGALPTGARMFRQSLLWTSCLALLAGPVACAQTQGGKPVAKSAVSAAPKLGAGI CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCHHHHHHHHHCCHHCCCC ESRTLKNGLKVIVWPDHDIPNVVLYNWFRVGSRNEYPGITGLSHFFEHMMFNGAKKYGPG HHHHHHCCCEEEEECCCCCCCHHHHHEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCCC EFDRVMEANGGANNAFTSEDVTVYMDWFPRSALDVIFDLEADRLQHLAIDPKVTESERGV HHHHHHHCCCCCCCCCCCCCEEEEEECCCCHHHHHHHCCCHHHHHHHCCCCCCCCCCCCC VYSERRSAIDNDNMGALMEQVQATAFVAHPYQFPVIGWPSDIESWRIEDLQRYYKTYYAP EEHHHHHCCCCCCHHHHHHHHHHHHEEECCEECCEECCCCCHHHHHHHHHHHHHHHHCCC NNATLIFTGAVTPAEIFALAEKYLEPIPSQPAPEPVRTKEPEQQGERRIVVKKQAQAPLI CCCEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHCCCEEEEECCCCCCEE QLAYHGISGKDADVEALTLLLSILTNGDSSRLHRRLVEEERAALRVNTHFSPGFDPSLVW HHHHCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHEEEEECCCCCCCCCCEEE VYADLPPGADVAKVEGLLTEELARVVKDGVSDAELKKARNITLSQFWRSLETNNGRGRAL EEECCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHCCCCCCCEE GAAETFRGDYRQLFDAPDRYERVTRDDVRKVAARIFNSQRRTVGWLVPADAQAATPDSRK CHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCHH EASR HCCC >Mature Secondary Structure MRRRPFPGALPTGARMFRQSLLWTSCLALLAGPVACAQTQGGKPVAKSAVSAAPKLGAGI CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCHHHHHHHHHCCHHCCCC ESRTLKNGLKVIVWPDHDIPNVVLYNWFRVGSRNEYPGITGLSHFFEHMMFNGAKKYGPG HHHHHHCCCEEEEECCCCCCCHHHHHEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCCC EFDRVMEANGGANNAFTSEDVTVYMDWFPRSALDVIFDLEADRLQHLAIDPKVTESERGV HHHHHHHCCCCCCCCCCCCCEEEEEECCCCHHHHHHHCCCHHHHHHHCCCCCCCCCCCCC VYSERRSAIDNDNMGALMEQVQATAFVAHPYQFPVIGWPSDIESWRIEDLQRYYKTYYAP EEHHHHHCCCCCCHHHHHHHHHHHHEEECCEECCEECCCCCHHHHHHHHHHHHHHHHCCC NNATLIFTGAVTPAEIFALAEKYLEPIPSQPAPEPVRTKEPEQQGERRIVVKKQAQAPLI CCCEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHCCCEEEEECCCCCCEE QLAYHGISGKDADVEALTLLLSILTNGDSSRLHRRLVEEERAALRVNTHFSPGFDPSLVW HHHHCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHEEEEECCCCCCCCCCEEE VYADLPPGADVAKVEGLLTEELARVVKDGVSDAELKKARNITLSQFWRSLETNNGRGRAL EEECCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHCCCCCCCEE GAAETFRGDYRQLFDAPDRYERVTRDDVRKVAARIFNSQRRTVGWLVPADAQAATPDSRK CHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCHH EASR HCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: Zn [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Hydrolase; Acting on peptide bonds (Peptidases); Endopeptidases of unknown catalytic mechanism [C]
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]