| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108757093
Identifier: 108757093
GI number: 108757093
Start: 904238
End: 905854
Strand: Direct
Name: 108757093
Synonym: MXAN_0793
Alternate gene names: NA
Gene position: 904238-905854 (Clockwise)
Preceding gene: 108758081
Following gene: 108758000
Centisome position: 9.89
GC content: 66.85
Gene sequence:
>1617_bases ATGCGTTTGCGTCACTGGTCGCTGCTGCTGGTGCCCACCTGTGCTGCGTGGCTTGGCTGTGCGGGTGGCGAACCGGGTTC CGCTTCGGACTTCGGCGACGGACAGTCGCCCGTGAGTGAGGACCGTCCCTCGGGCGACGGAACGGGCACGGACGAGCCGC GGTCCGACATCAGTGAGCCCGGCGATTCCGACGACGTGGTGTTTGTGACGCAGACCACGCGCTTCCACACGGCGGTGGGG GTCGCGGAGCGCCAGGAAGACCTCTCCGCGAATCCTCCTGAAATCTACGTTCCCTCCGGGAACACGTTCAGCGTCGTGTC GGGCTCGGCGTCTCCGGAAGGTTGGCGCTTTACGGGCATCCCGTCCGGTGCGTACTACCTGCGAACGGGCAACAGCTTCG TCGTCACGTCCGCGCGCGCTGTCGACATTGGCAGCAACCGGCTGGGCCGTCCCGATACGGTCTTCAGTGATTTGTTCTGG TCGCCCGTCCAGGTGAACCTCGTCAACCTGGCGCCATGGGTGCCCTACGGAGGCGTGACGCAGCCGGGCTCGAGCCTGCA GGTCGCGTCCGCACAGGTGGACCTCTATGGCGGCGTGAATGTCTTCGACGAGGTGCTTGAAGGACAGACGCACCTGCTCA GCAACAACGCCGAGGTGTTGGTGAGCAGCGGCTATTCGCTGCCTGTCTTCGAGGCTGACCGGGGAGACCGTCTATACGTG AGCCAGCACGGCCAGATGGACGCGGGGACGCTGCCGGACGGGACCCCGCTGGCATATTCGGCCCTGGTGCGCAGCGTGGA GATGGGGGCGTTCGACTTCGTCCCGGATGGCATCACCCCCATGCCGTTGACGGGCGTCATGCGCTCCGTGCCGATGACGG AGTTCCCCATCGAGTGGCGCCTGCCGGACTTCACCCGGTACGTACACGCGGTGCACCCGCTCGCCACGGCCAGCTACCCC TCCTTCTTCGTCATGCCCGCGGCCCACGGCCTGAGCGACGGCTGGGTGGGGTACTCGGGGGAGGCGCTCTCCCTGACGTT GCCGCGGGGCACTTCGTTCGACTTCACCCGGCGCTTGTCGTACGGAAACCCGTTCCCATCCTCGTGGGAGATGGTGGGCG GAGCGCAGTACTCATTCCGCGTCCAAGCGGAGGTGCCGGGGGGCTCCGGGCTCCGGCTCTACCTATCCGGCAGCATGTAT ACCTACGAGCGACTGGATAGCCTCGTCGCAGGACCCATCCTGCCGCGCGTGTCTCCGCCTCGTGAGCTGACCATTGACGG TCTGCCCGCCAGTGATTCCCGTGAGGTGGGCTCCGCGAGTCCCGTCATCGCGTGGCTGCCTCCCACGGTGGGGTCACCCG CCGCCTACCGGATTGCCATCTACCGGTTCCGGGAGGACTTCCGTACCACGGTGCTGCATGGCACCGTGAACGTGCCCGGC TCGGTCACCCAGGTGCGTCTGCCGCCCGGGACGCTGGCGCCAGAGGGCATCTACTACCTGCGTGTCTCGGCCGTGGATGC TCCGCACTACGAGATGGAGCGCTTCCCGTTCAGCACCGTGGACCGGTTGCCTCAGGCGCGCGCGGACACTCTCAGCTCGT TCTTCACCACCCCGTGA
Upstream 100 bases:
>100_bases CGGAATCCTCTGTCCCGAACGCAGCCCATCTGGCCGCCCAGCAGGAGATGTCAGAGGCCCTCGGTAGGGTGCTCGGCGCT TCATCCTCGATGGGGGTCAT
Downstream 100 bases:
>100_bases GGCGTGGTCGCTGAATCCGGGGCCCGCTACTTCGCCGTCAGCGCGCGGTAGCGGGTCATGCACTTCTGGAAGCGCTGGTC CACCGAGCGCGCGAACCACG
Product: putative lipoprotein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 538; Mature: 538
Protein sequence:
>538_residues MRLRHWSLLLVPTCAAWLGCAGGEPGSASDFGDGQSPVSEDRPSGDGTGTDEPRSDISEPGDSDDVVFVTQTTRFHTAVG VAERQEDLSANPPEIYVPSGNTFSVVSGSASPEGWRFTGIPSGAYYLRTGNSFVVTSARAVDIGSNRLGRPDTVFSDLFW SPVQVNLVNLAPWVPYGGVTQPGSSLQVASAQVDLYGGVNVFDEVLEGQTHLLSNNAEVLVSSGYSLPVFEADRGDRLYV SQHGQMDAGTLPDGTPLAYSALVRSVEMGAFDFVPDGITPMPLTGVMRSVPMTEFPIEWRLPDFTRYVHAVHPLATASYP SFFVMPAAHGLSDGWVGYSGEALSLTLPRGTSFDFTRRLSYGNPFPSSWEMVGGAQYSFRVQAEVPGGSGLRLYLSGSMY TYERLDSLVAGPILPRVSPPRELTIDGLPASDSREVGSASPVIAWLPPTVGSPAAYRIAIYRFREDFRTTVLHGTVNVPG SVTQVRLPPGTLAPEGIYYLRVSAVDAPHYEMERFPFSTVDRLPQARADTLSSFFTTP
Sequences:
>Translated_538_residues MRLRHWSLLLVPTCAAWLGCAGGEPGSASDFGDGQSPVSEDRPSGDGTGTDEPRSDISEPGDSDDVVFVTQTTRFHTAVG VAERQEDLSANPPEIYVPSGNTFSVVSGSASPEGWRFTGIPSGAYYLRTGNSFVVTSARAVDIGSNRLGRPDTVFSDLFW SPVQVNLVNLAPWVPYGGVTQPGSSLQVASAQVDLYGGVNVFDEVLEGQTHLLSNNAEVLVSSGYSLPVFEADRGDRLYV SQHGQMDAGTLPDGTPLAYSALVRSVEMGAFDFVPDGITPMPLTGVMRSVPMTEFPIEWRLPDFTRYVHAVHPLATASYP SFFVMPAAHGLSDGWVGYSGEALSLTLPRGTSFDFTRRLSYGNPFPSSWEMVGGAQYSFRVQAEVPGGSGLRLYLSGSMY TYERLDSLVAGPILPRVSPPRELTIDGLPASDSREVGSASPVIAWLPPTVGSPAAYRIAIYRFREDFRTTVLHGTVNVPG SVTQVRLPPGTLAPEGIYYLRVSAVDAPHYEMERFPFSTVDRLPQARADTLSSFFTTP >Mature_538_residues MRLRHWSLLLVPTCAAWLGCAGGEPGSASDFGDGQSPVSEDRPSGDGTGTDEPRSDISEPGDSDDVVFVTQTTRFHTAVG VAERQEDLSANPPEIYVPSGNTFSVVSGSASPEGWRFTGIPSGAYYLRTGNSFVVTSARAVDIGSNRLGRPDTVFSDLFW SPVQVNLVNLAPWVPYGGVTQPGSSLQVASAQVDLYGGVNVFDEVLEGQTHLLSNNAEVLVSSGYSLPVFEADRGDRLYV SQHGQMDAGTLPDGTPLAYSALVRSVEMGAFDFVPDGITPMPLTGVMRSVPMTEFPIEWRLPDFTRYVHAVHPLATASYP SFFVMPAAHGLSDGWVGYSGEALSLTLPRGTSFDFTRRLSYGNPFPSSWEMVGGAQYSFRVQAEVPGGSGLRLYLSGSMY TYERLDSLVAGPILPRVSPPRELTIDGLPASDSREVGSASPVIAWLPPTVGSPAAYRIAIYRFREDFRTTVLHGTVNVPG SVTQVRLPPGTLAPEGIYYLRVSAVDAPHYEMERFPFSTVDRLPQARADTLSSFFTTP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 57944; Mature: 57944
Theoretical pI: Translated: 4.56; Mature: 4.56
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLRHWSLLLVPTCAAWLGCAGGEPGSASDFGDGQSPVSEDRPSGDGTGTDEPRSDISEP CCCEEEEEEEHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCC GDSDDVVFVTQTTRFHTAVGVAERQEDLSANPPEIYVPSGNTFSVVSGSASPEGWRFTGI CCCCCEEEEEECCEEEHHHHHHHHHHHCCCCCCEEEECCCCEEEEEECCCCCCCEEEECC PSGAYYLRTGNSFVVTSARAVDIGSNRLGRPDTVFSDLFWSPVQVNLVNLAPWVPYGGVT CCCEEEEEECCEEEEEEEEEEECCCCCCCCCCHHHHHHCCCCEEEEEEEECCCCCCCCCC QPGSSLQVASAQVDLYGGVNVFDEVLEGQTHLLSNNAEVLVSSGYSLPVFEADRGDRLYV CCCCCEEEEEEEEEEECCHHHHHHHHCCCEEEECCCCEEEEECCCCCEEEECCCCCEEEE SQHGQMDAGTLPDGTPLAYSALVRSVEMGAFDFVPDGITPMPLTGVMRSVPMTEFPIEWR ECCCCCCCCCCCCCCCHHHHHHHHHHHCCCEECCCCCCCCCCHHHHHHHCCCCCCCEEEC LPDFTRYVHAVHPLATASYPSFFVMPAAHGLSDGWVGYSGEALSLTLPRGTSFDFTRRLS CCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCEEEEECCCCCCCCHHEECC YGNPFPSSWEMVGGAQYSFRVQAEVPGGSGLRLYLSGSMYTYERLDSLVAGPILPRVSPP CCCCCCCCCCEECCCEEEEEEEEECCCCCCEEEEEECCEEHHHHHHHHHHCCCCCCCCCC RELTIDGLPASDSREVGSASPVIAWLPPTVGSPAAYRIAIYRFREDFRTTVLHGTVNVPG CEEEECCCCCCCCCCCCCCCCEEEECCCCCCCCCEEEEEEEEHHHHHEEEEEEEEECCCC SVTQVRLPPGTLAPEGIYYLRVSAVDAPHYEMERFPFSTVDRLPQARADTLSSFFTTP CEEEEECCCCCCCCCCEEEEEEEEECCCCHHHHHCCHHHHHHCCHHHHHHHHHHCCCC >Mature Secondary Structure MRLRHWSLLLVPTCAAWLGCAGGEPGSASDFGDGQSPVSEDRPSGDGTGTDEPRSDISEP CCCEEEEEEEHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCC GDSDDVVFVTQTTRFHTAVGVAERQEDLSANPPEIYVPSGNTFSVVSGSASPEGWRFTGI CCCCCEEEEEECCEEEHHHHHHHHHHHCCCCCCEEEECCCCEEEEEECCCCCCCEEEECC PSGAYYLRTGNSFVVTSARAVDIGSNRLGRPDTVFSDLFWSPVQVNLVNLAPWVPYGGVT CCCEEEEEECCEEEEEEEEEEECCCCCCCCCCHHHHHHCCCCEEEEEEEECCCCCCCCCC QPGSSLQVASAQVDLYGGVNVFDEVLEGQTHLLSNNAEVLVSSGYSLPVFEADRGDRLYV CCCCCEEEEEEEEEEECCHHHHHHHHCCCEEEECCCCEEEEECCCCCEEEECCCCCEEEE SQHGQMDAGTLPDGTPLAYSALVRSVEMGAFDFVPDGITPMPLTGVMRSVPMTEFPIEWR ECCCCCCCCCCCCCCCHHHHHHHHHHHCCCEECCCCCCCCCCHHHHHHHCCCCCCCEEEC LPDFTRYVHAVHPLATASYPSFFVMPAAHGLSDGWVGYSGEALSLTLPRGTSFDFTRRLS CCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCEEEEECCCCCCCCHHEECC YGNPFPSSWEMVGGAQYSFRVQAEVPGGSGLRLYLSGSMYTYERLDSLVAGPILPRVSPP CCCCCCCCCCEECCCEEEEEEEEECCCCCCEEEEEECCEEHHHHHHHHHHCCCCCCCCCC RELTIDGLPASDSREVGSASPVIAWLPPTVGSPAAYRIAIYRFREDFRTTVLHGTVNVPG CEEEECCCCCCCCCCCCCCCCEEEECCCCCCCCCEEEEEEEEHHHHHEEEEEEEEECCCC SVTQVRLPPGTLAPEGIYYLRVSAVDAPHYEMERFPFSTVDRLPQARADTLSSFFTTP CEEEEECCCCCCCCCCEEEEEEEEECCCCHHHHHCCHHHHHHCCHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA