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The map label for this gene is 108563940

Identifier: 108563940

GI number: 108563940

Start: 1580311

End: 1580754

Strand: Reverse

Name: 108563940

Synonym: HPAG1_1515

Alternate gene names: NA

Gene position: 1580754-1580311 (Counterclockwise)

Preceding gene: 108563941

Following gene: 108563939

Centisome position: 99.02

GC content: 31.98

Gene sequence:

>444_bases
ATGCTCTCTTTAAAACAAGATTCCTTTTTTTTCTTATGTTTAGGGATCTTGGGTTTTTATTTTTATAGCCTTTTGAGAGA
TTTAATGCCTTTTTTACCCCCTATGATTGGGTTTTTATTCTTGTTTTATGCGAAAAAATACGATCGTTTTTTACCCAGTT
TGAGCGTGTTTGGTTGTTTGTTTTGGTTTGAAAGCATGCATTTAAAGACTTTAGGCGTTTTGGCTTTATTGTTTTTAATC
TACCATCAAATCGTCTATAAAAACTCTTTAAAGCTTTTTAATGACGGCTTTTTATTCAAAACTTTGCATGTTTTTTTGGT
TTATTACCTTTATTTATCGCGCTTTTTTTCGGTGTCCTTGAGTTTGAAAATACTCGGCTTTCTCGCTCTTTTTGCTTTAA
TAGAGAGCGCTTTGTGGGGTTTGTATGAAAAATCTTCGCTATAA

Upstream 100 bases:

>100_bases
CCATTTTAACGCTCTTTCTTCAAAATACCCAACCCTTGAAATCGTGCGCCAAACCCTTTTGAAATACTTGCTCACTAACC
CATTATAAGCCGCAAAAACC

Downstream 100 bases:

>100_bases
GCTTTTGCTTTTTGTTTTTATAGGGTTTTGGGGGTTATTGGTTTTAAATTTATTTATTTTAAGCGTTAAAAATCAAGAAT
ACTATGAAAAACTGGCTGAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 147; Mature: 147

Protein sequence:

>147_residues
MLSLKQDSFFFLCLGILGFYFYSLLRDLMPFLPPMIGFLFLFYAKKYDRFLPSLSVFGCLFWFESMHLKTLGVLALLFLI
YHQIVYKNSLKLFNDGFLFKTLHVFLVYYLYLSRFFSVSLSLKILGFLALFALIESALWGLYEKSSL

Sequences:

>Translated_147_residues
MLSLKQDSFFFLCLGILGFYFYSLLRDLMPFLPPMIGFLFLFYAKKYDRFLPSLSVFGCLFWFESMHLKTLGVLALLFLI
YHQIVYKNSLKLFNDGFLFKTLHVFLVYYLYLSRFFSVSLSLKILGFLALFALIESALWGLYEKSSL
>Mature_147_residues
MLSLKQDSFFFLCLGILGFYFYSLLRDLMPFLPPMIGFLFLFYAKKYDRFLPSLSVFGCLFWFESMHLKTLGVLALLFLI
YHQIVYKNSLKLFNDGFLFKTLHVFLVYYLYLSRFFSVSLSLKILGFLALFALIESALWGLYEKSSL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17326; Mature: 17326

Theoretical pI: Translated: 9.47; Mature: 9.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSLKQDSFFFLCLGILGFYFYSLLRDLMPFLPPMIGFLFLFYAKKYDRFLPSLSVFGCL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FWFESMHLKTLGVLALLFLIYHQIVYKNSLKLFNDGFLFKTLHVFLVYYLYLSRFFSVSL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
SLKILGFLALFALIESALWGLYEKSSL
HHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLSLKQDSFFFLCLGILGFYFYSLLRDLMPFLPPMIGFLFLFYAKKYDRFLPSLSVFGCL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FWFESMHLKTLGVLALLFLIYHQIVYKNSLKLFNDGFLFKTLHVFLVYYLYLSRFFSVSL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
SLKILGFLALFALIESALWGLYEKSSL
HHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA