Definition Helicobacter pylori HPAG1 chromosome, complete genome.
Accession NC_008086
Length 1,596,366

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The map label for this gene is engB [H]

Identifier: 108563941

GI number: 108563941

Start: 1580767

End: 1581393

Strand: Reverse

Name: engB [H]

Synonym: HPAG1_1516

Alternate gene names: 108563941

Gene position: 1581393-1580767 (Counterclockwise)

Preceding gene: 108563942

Following gene: 108563940

Centisome position: 99.06

GC content: 37.96

Gene sequence:

>627_bases
ATGATTGTCATTAAAGACGCTCATTTTCTCACTTCTTCTAGCCAACTTTTTCAGTGCCCTGCGAGCTTAACTTCTGAGAT
GGTCATTTTAGGGCGCAGTAATGTCGGTAAAAGCTCGTTTATTAATACCTTGTTAGGAAAAAATCTCGCCAAAAGTTCAG
CAACGCCTGGAAAAACCCGTTTAGCGAATTTTTTTTCCACCACTTGGGAAGATAAAGAAAACGCCTTAACGACCACTTTT
AATGTGATTGATTTGCCCGGGTTTGGCTACGCTAAAGTTTCTAAAAACTTGAAAAAAGAATGGGAGGGGTTTTTATGGGA
ATTGTTGAGCGTTAGGGTTTCTATCAAACTTTTTATCCATTTAGTGGATGCGCGCCATTTGAATTTAGAAATTGATAAAA
ACGCTAAAGAAAACATTCAAGCCCTTTTAAGGCCCGATCAAGCCTACCTTTCTCTTTTTACGAAATTTGACAAGTTGAAT
AAAAACGAGCAACACCGCCTTTTTTTAAACGCTCCTAAACCTTTTTTAATCAATACCACCCATTTTAACGCTCTTTCTTC
AAAATACCCAACCCTTGAAATCGTGCGCCAAACCCTTTTGAAATACTTGCTCACTAACCCATTATAA

Upstream 100 bases:

>100_bases
GGAGCGCGAAACGGCCCGCTAAATTTGTGTTTGATATGGAAGATATTAATGAAGAAAATCGTAAAGCTAAATTGAAGAAG
AAAGGCGCTAAGGAAAAACC

Downstream 100 bases:

>100_bases
GCCGCAAAAACCATGCTCTCTTTAAAACAAGATTCCTTTTTTTTCTTATGTTTAGGGATCTTGGGTTTTTATTTTTATAG
CCTTTTGAGAGATTTAATGC

Product: ribosome biogenesis GTP-binding protein YsxC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 208; Mature: 208

Protein sequence:

>208_residues
MIVIKDAHFLTSSSQLFQCPASLTSEMVILGRSNVGKSSFINTLLGKNLAKSSATPGKTRLANFFSTTWEDKENALTTTF
NVIDLPGFGYAKVSKNLKKEWEGFLWELLSVRVSIKLFIHLVDARHLNLEIDKNAKENIQALLRPDQAYLSLFTKFDKLN
KNEQHRLFLNAPKPFLINTTHFNALSSKYPTLEIVRQTLLKYLLTNPL

Sequences:

>Translated_208_residues
MIVIKDAHFLTSSSQLFQCPASLTSEMVILGRSNVGKSSFINTLLGKNLAKSSATPGKTRLANFFSTTWEDKENALTTTF
NVIDLPGFGYAKVSKNLKKEWEGFLWELLSVRVSIKLFIHLVDARHLNLEIDKNAKENIQALLRPDQAYLSLFTKFDKLN
KNEQHRLFLNAPKPFLINTTHFNALSSKYPTLEIVRQTLLKYLLTNPL
>Mature_208_residues
MIVIKDAHFLTSSSQLFQCPASLTSEMVILGRSNVGKSSFINTLLGKNLAKSSATPGKTRLANFFSTTWEDKENALTTTF
NVIDLPGFGYAKVSKNLKKEWEGFLWELLSVRVSIKLFIHLVDARHLNLEIDKNAKENIQALLRPDQAYLSLFTKFDKLN
KNEQHRLFLNAPKPFLINTTHFNALSSKYPTLEIVRQTLLKYLLTNPL

Specific function: Necessary for normal cell division and for the maintenance of normal septation [H]

COG id: COG0218

COG function: function code R; Predicted GTPase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 G (guanine nucleotide-binding) domain [H]

Homologues:

Organism=Escherichia coli, GI145693205, Length=153, Percent_Identity=36.6013071895425, Blast_Score=96, Evalue=2e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019987
- InterPro:   IPR002917 [H]

Pfam domain/function: PF01926 MMR_HSR1 [H]

EC number: NA

Molecular weight: Translated: 23631; Mature: 23631

Theoretical pI: Translated: 10.30; Mature: 10.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIVIKDAHFLTSSSQLFQCPASLTSEMVILGRSNVGKSSFINTLLGKNLAKSSATPGKTR
CEEEECCHHHCCCHHHHCCCHHHCCCEEEEECCCCCHHHHHHHHHHCHHHHCCCCCCHHH
LANFFSTTWEDKENALTTTFNVIDLPGFGYAKVSKNLKKEWEGFLWELLSVRVSIKLFIH
HHHHHHHCCCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVDARHLNLEIDKNAKENIQALLRPDQAYLSLFTKFDKLNKNEQHRLFLNAPKPFLINTT
EECCCEEEEEECCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCEEEEECCCCEEEECC
HFNALSSKYPTLEIVRQTLLKYLLTNPL
CCHHHHCCCCHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MIVIKDAHFLTSSSQLFQCPASLTSEMVILGRSNVGKSSFINTLLGKNLAKSSATPGKTR
CEEEECCHHHCCCHHHHCCCHHHCCCEEEEECCCCCHHHHHHHHHHCHHHHCCCCCCHHH
LANFFSTTWEDKENALTTTFNVIDLPGFGYAKVSKNLKKEWEGFLWELLSVRVSIKLFIH
HHHHHHHCCCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVDARHLNLEIDKNAKENIQALLRPDQAYLSLFTKFDKLNKNEQHRLFLNAPKPFLINTT
EECCCEEEEEECCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCEEEEECCCCEEEECC
HFNALSSKYPTLEIVRQTLLKYLLTNPL
CCHHHHCCCCHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA