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The map label for this gene is 108563836

Identifier: 108563836

GI number: 108563836

Start: 1468158

End: 1469324

Strand: Direct

Name: 108563836

Synonym: HPAG1_1411

Alternate gene names: NA

Gene position: 1468158-1469324 (Clockwise)

Preceding gene: 108563834

Following gene: 108563847

Centisome position: 91.97

GC content: 42.84

Gene sequence:

>1167_bases
GTGGTGTTCAATTTTATGACAAAGAAGAAAAATAGAATGCAAGGTTGCAAAATGGTTGGTAAAAATTTTAATCGTAAGGA
ATCTGTTTTGATAGCTCAATCTTTAGATATTTCTAAAAAAGGTTCGGTAATTTTAGGCGCTCTTTTGAGTTCGTTATGGC
TGACAAACCCCTTAAATGCCCATGAAAAGAATGGTGCGTTTGTGGGGATTAGCTTGGAAGTGGGTAGGGCTGATCAAAAG
ACCAACGCTTATAAAAACGGCGAGTTGTTTCAAGTGCCTTTTGGCGATGTTTCGGCTAATGATAATGGCAAAGTTCCTGA
CGGGCAGACCGGTGGCTGTCAGCCAGCTTCAGGGACGCCAGGAACGCCAGGCTACACTAAAGCTAACTGCGTGGTCAATT
GGACTTCGCGCACCATGCTTAGCACCAATAAAAACATTCCTGGCCGTAACCAGCCGATGTATGGGCTAGGCGTGATGACA
GGTTATAAGCATTTTATCGGTAAAAAAAGGTGGTTTGGGTTGCGTTATTATGGCTTTTTTGATTATGGGCATACCAATTT
CTCTAACTCCAGAGCCGCTAACGCCATATCGCCTTTTTATTTGAGCGATCAAAAAGCCGACATGTATACTTATGGTTTTG
GCACAGACATGCTTTTTAACATTATAGATAAGCCTAAAGCCACGGCCGGGTTTTTTCTAGGCGTGAATTTTGCGGGTAAC
ACTTGGACTAATAATCGTGTGGGGTATTTTAAGGACGGGTATGTTTATGGCGTCAATACGGACGCTGACGCTTACATGAC
TAACGCTGATGGCACAATCACTTGCGGGGACACGACGCCGGCGAGTTGCAATGTGGGGATTAACCCTAATAGCGTCTATA
CCACAGGAAAATTGAACGCTAAAGTGAATAACACGATTTTTCAGTTTTTAGTGAATGTGGGCATTAGGACTAATATTTTT
GAACACCATGGCATTGAGTTTGGTATCAAAATCCCCACGCTCCCTAATCACTTTTTCAAAGGCTCTACCACTATTAAAGA
GCAAAGCCAAGGCCCGCTAAAAGACAGCAAACCAACCACTATCACCGGGGCAGAAACCAATTTCAGCTTAACCCAAACCT
TACGCCGTCAGTATTCTATGTATTTGCGCTATGTTTATACTTTTTAA

Upstream 100 bases:

>100_bases
TATGGGAATTTTAGGGGTGGTTTTTATTTGACTTTTAAGATTGCAATTAGCTATAATAAAATAATTAAAAAAGTAACACT
TAAGCGGAGTACCCTAGAGA

Downstream 100 bases:

>100_bases
GTTTGGTAGGGGTTTTAGGCAAGGCTTAGAGATGAAAGCTTGATATTTTAAGCTTTCAAATGGTCATTGATCTGTAACTA
TTCTATGCTATTTTCTACTT

Product: outer membrane protein HopK

Products: NA

Alternate protein names: Outer Membrane Protein HorA; Outer Membrane Protein HopQ; Outer Membrane Protein HopE; Outer Membrane Protein HopZ; Outer Membrane Protein/Porin; Outer Membrane Protein HopW Protein (; Outer Membrane Protein HorJ; Outer Membrane Protein SabB/HopO; Outer Membrane Protein HopA; Outer Membrane Protein BabA; Outer Membrane Protein HopD; Outer Membrane Function; Outer Membrane Protein HorK; Adhesin; Outer Membrane Protein HorF; Outer Membrane Protein HopL; Outer Membrane Protein,HopV BabB BabA; Outer Membrane Protein HorB; Outer Membrane Protein HopF; Outer Membrane Protein HopG

Number of amino acids: Translated: 388; Mature: 388

Protein sequence:

>388_residues
MVFNFMTKKKNRMQGCKMVGKNFNRKESVLIAQSLDISKKGSVILGALLSSLWLTNPLNAHEKNGAFVGISLEVGRADQK
TNAYKNGELFQVPFGDVSANDNGKVPDGQTGGCQPASGTPGTPGYTKANCVVNWTSRTMLSTNKNIPGRNQPMYGLGVMT
GYKHFIGKKRWFGLRYYGFFDYGHTNFSNSRAANAISPFYLSDQKADMYTYGFGTDMLFNIIDKPKATAGFFLGVNFAGN
TWTNNRVGYFKDGYVYGVNTDADAYMTNADGTITCGDTTPASCNVGINPNSVYTTGKLNAKVNNTIFQFLVNVGIRTNIF
EHHGIEFGIKIPTLPNHFFKGSTTIKEQSQGPLKDSKPTTITGAETNFSLTQTLRRQYSMYLRYVYTF

Sequences:

>Translated_388_residues
MVFNFMTKKKNRMQGCKMVGKNFNRKESVLIAQSLDISKKGSVILGALLSSLWLTNPLNAHEKNGAFVGISLEVGRADQK
TNAYKNGELFQVPFGDVSANDNGKVPDGQTGGCQPASGTPGTPGYTKANCVVNWTSRTMLSTNKNIPGRNQPMYGLGVMT
GYKHFIGKKRWFGLRYYGFFDYGHTNFSNSRAANAISPFYLSDQKADMYTYGFGTDMLFNIIDKPKATAGFFLGVNFAGN
TWTNNRVGYFKDGYVYGVNTDADAYMTNADGTITCGDTTPASCNVGINPNSVYTTGKLNAKVNNTIFQFLVNVGIRTNIF
EHHGIEFGIKIPTLPNHFFKGSTTIKEQSQGPLKDSKPTTITGAETNFSLTQTLRRQYSMYLRYVYTF
>Mature_388_residues
MVFNFMTKKKNRMQGCKMVGKNFNRKESVLIAQSLDISKKGSVILGALLSSLWLTNPLNAHEKNGAFVGISLEVGRADQK
TNAYKNGELFQVPFGDVSANDNGKVPDGQTGGCQPASGTPGTPGYTKANCVVNWTSRTMLSTNKNIPGRNQPMYGLGVMT
GYKHFIGKKRWFGLRYYGFFDYGHTNFSNSRAANAISPFYLSDQKADMYTYGFGTDMLFNIIDKPKATAGFFLGVNFAGN
TWTNNRVGYFKDGYVYGVNTDADAYMTNADGTITCGDTTPASCNVGINPNSVYTTGKLNAKVNNTIFQFLVNVGIRTNIF
EHHGIEFGIKIPTLPNHFFKGSTTIKEQSQGPLKDSKPTTITGAETNFSLTQTLRRQYSMYLRYVYTF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42843; Mature: 42843

Theoretical pI: Translated: 9.94; Mature: 9.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVFNFMTKKKNRMQGCKMVGKNFNRKESVLIAQSLDISKKGSVILGALLSSLWLTNPLNA
CEECCHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCC
HEKNGAFVGISLEVGRADQKTNAYKNGELFQVPFGDVSANDNGKVPDGQTGGCQPASGTP
CCCCCEEEEEEEEECCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC
GTPGYTKANCVVNWTSRTMLSTNKNIPGRNQPMYGLGVMTGYKHFIGKKRWFGLRYYGFF
CCCCCEECEEEEEECCCEEEECCCCCCCCCCCEEEEHHHHHHHHHHCCCCEEEEEEEEEE
DYGHTNFSNSRAANAISPFYLSDQKADMYTYGFGTDMLFNIIDKPKATAGFFLGVNFAGN
ECCCCCCCCCCCCCCCCCEEECCCCCCEEEEECCHHHHHHHHCCCCCCEEEEEEEEECCC
TWTNNRVGYFKDGYVYGVNTDADAYMTNADGTITCGDTTPASCNVGINPNSVYTTGKLNA
CCCCCCCCEEECCEEEEECCCCCEEEECCCCEEEECCCCCCEEEECCCCCCEEEEEEECC
KVNNTIFQFLVNVGIRTNIFEHHGIEFGIKIPTLPNHFFKGSTTIKEQSQGPLKDSKPTT
CHHHHHHHHHHHCCCEECCHHHCCEEEEEECCCCCCHHCCCCCCCHHCCCCCCCCCCCCE
ITGAETNFSLTQTLRRQYSMYLRYVYTF
EECCCCCCHHHHHHHHHHHHHHEEEEEC
>Mature Secondary Structure
MVFNFMTKKKNRMQGCKMVGKNFNRKESVLIAQSLDISKKGSVILGALLSSLWLTNPLNA
CEECCHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCC
HEKNGAFVGISLEVGRADQKTNAYKNGELFQVPFGDVSANDNGKVPDGQTGGCQPASGTP
CCCCCEEEEEEEEECCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC
GTPGYTKANCVVNWTSRTMLSTNKNIPGRNQPMYGLGVMTGYKHFIGKKRWFGLRYYGFF
CCCCCEECEEEEEECCCEEEECCCCCCCCCCCEEEEHHHHHHHHHHCCCCEEEEEEEEEE
DYGHTNFSNSRAANAISPFYLSDQKADMYTYGFGTDMLFNIIDKPKATAGFFLGVNFAGN
ECCCCCCCCCCCCCCCCCEEECCCCCCEEEEECCHHHHHHHHCCCCCCEEEEEEEEECCC
TWTNNRVGYFKDGYVYGVNTDADAYMTNADGTITCGDTTPASCNVGINPNSVYTTGKLNA
CCCCCCCCEEECCEEEEECCCCCEEEECCCCEEEECCCCCCEEEECCCCCCEEEEEEECC
KVNNTIFQFLVNVGIRTNIFEHHGIEFGIKIPTLPNHFFKGSTTIKEQSQGPLKDSKPTT
CHHHHHHHHHHHCCCEECCHHHCCEEEEEECCCCCCHHCCCCCCCHHCCCCCCCCCCCCE
ITGAETNFSLTQTLRRQYSMYLRYVYTF
EECCCCCCHHHHHHHHHHHHHHEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA