The gene/protein map for NC_008086 is currently unavailable.
Definition Helicobacter pylori HPAG1 chromosome, complete genome.
Accession NC_008086
Length 1,596,366

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The map label for this gene is 108563826

Identifier: 108563826

GI number: 108563826

Start: 1458099

End: 1458425

Strand: Reverse

Name: 108563826

Synonym: HPAG1_1401

Alternate gene names: NA

Gene position: 1458425-1458099 (Counterclockwise)

Preceding gene: 108563827

Following gene: 108563825

Centisome position: 91.36

GC content: 38.84

Gene sequence:

>327_bases
ATGAAAACGATCTTTAGCCTCTTTTTCCTTCTTATTGTTTTAAAAGCGCACCCCATAAACCCTTTATTAGAGCCGCTATA
TTTCCCCAGTTACGCGCAATTTTTAAATTTAGAACCTCATTTTGTCATTAAAAAAAAGCACGCTTATAGGCCTTTTCAAT
GGGGGAATACCATCATTATCAAACGCCATGACTTAGAAGAACGCCAAAGCAACCAGCCAAGCGATATTTTCCGCCAAAAC
GCTGAAATCAATGTGTCTTTTCAAACTTTTTTAAGAGGAATAAGCAGCGCTTCTTCACGCATAGTGATCGATTCGGTCGC
TCAGTAA

Upstream 100 bases:

>100_bases
TTAAAAACGCGCTATAGTGGAATCTCTGAGCTTTATTTGAAAATCAGCAAGTTAGAAATTTCTCCCAATTCTCAAGTGGG
AGCGAGCGTGAAAATCTGCT

Downstream 100 bases:

>100_bases
AATGCTAAAACTTTTTTAATCACATTTTTCTTGGTATTTTCTTAATCCTAAAACAAATTTAAGGTATTATTAAATAGAAT
AATGTAATAATAACTTTAGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 108; Mature: 108

Protein sequence:

>108_residues
MKTIFSLFFLLIVLKAHPINPLLEPLYFPSYAQFLNLEPHFVIKKKHAYRPFQWGNTIIIKRHDLEERQSNQPSDIFRQN
AEINVSFQTFLRGISSASSRIVIDSVAQ

Sequences:

>Translated_108_residues
MKTIFSLFFLLIVLKAHPINPLLEPLYFPSYAQFLNLEPHFVIKKKHAYRPFQWGNTIIIKRHDLEERQSNQPSDIFRQN
AEINVSFQTFLRGISSASSRIVIDSVAQ
>Mature_108_residues
MKTIFSLFFLLIVLKAHPINPLLEPLYFPSYAQFLNLEPHFVIKKKHAYRPFQWGNTIIIKRHDLEERQSNQPSDIFRQN
AEINVSFQTFLRGISSASSRIVIDSVAQ

Specific function: Unknown

COG id: COG1629

COG function: function code P; Outer membrane receptor proteins, mostly Fe transport

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12617; Mature: 12617

Theoretical pI: Translated: 10.23; Mature: 10.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTIFSLFFLLIVLKAHPINPLLEPLYFPSYAQFLNLEPHFVIKKKHAYRPFQWGNTIII
CHHHHHHHHHHHHHHCCCCCHHHHHHCCCCHHHHHCCCCCEEEECCCCCCCCCCCCEEEE
KRHDLEERQSNQPSDIFRQNAEINVSFQTFLRGISSASSRIVIDSVAQ
ECCCCHHHHCCCCHHHHHCCCEEEEEHHHHHHHHHCCCCEEEEECCCC
>Mature Secondary Structure
MKTIFSLFFLLIVLKAHPINPLLEPLYFPSYAQFLNLEPHFVIKKKHAYRPFQWGNTIII
CHHHHHHHHHHHHHHCCCCCHHHHHHCCCCHHHHHCCCCCEEEECCCCCCCCCCCCEEEE
KRHDLEERQSNQPSDIFRQNAEINVSFQTFLRGISSASSRIVIDSVAQ
ECCCCHHHHCCCCHHHHHCCCEEEEEHHHHHHHHHCCCCEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA