Definition Helicobacter pylori HPAG1 chromosome, complete genome.
Accession NC_008086
Length 1,596,366

Click here to switch to the map view.

The map label for this gene is 108563806

Identifier: 108563806

GI number: 108563806

Start: 1431375

End: 1431626

Strand: Direct

Name: 108563806

Synonym: HPAG1_1381

Alternate gene names: NA

Gene position: 1431375-1431626 (Clockwise)

Preceding gene: 108563804

Following gene: 108563807

Centisome position: 89.66

GC content: 27.38

Gene sequence:

>252_bases
GTGAATACAAACAAACAAATCATTAAAAGCCTTAGGTTATCTCAAAAACAATGGCAAACTATCCAAACCCAAATGCAAGA
AAAAAATTTAAATTTCTCTCAACTAGTTTTAAATTCTCTTTTACATCAAAACTCACAAACTCCAATAAAATCTAAAAAAC
AAAAAGCGATTGCTAATAAAGAACTAGTTATTGAATTAGCTAAGTGGGGAAACAATTTAAACCAAATCGCTAAATTTCTC
AACACTAATTAA

Upstream 100 bases:

>100_bases
AATAAAATGGGTAACCACAAATAACGGCGGCTATAAATACCGCTTATTCTTGCAATGGGGCAAGCCCCCTTGACCCCCTA
AAAATCAAATAAGGGAACAA

Downstream 100 bases:

>100_bases
AGGAGCGTTGTAATCATTTGAAAGCGCGCTAGCGATCAGATGACCCATGCTAGCTTTTTCTGCAATGTAAAGATTAGGCA
TTGTCGTTTGCTTCCAAAAT

Product: MobC-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 83; Mature: 83

Protein sequence:

>83_residues
MNTNKQIIKSLRLSQKQWQTIQTQMQEKNLNFSQLVLNSLLHQNSQTPIKSKKQKAIANKELVIELAKWGNNLNQIAKFL
NTN

Sequences:

>Translated_83_residues
MNTNKQIIKSLRLSQKQWQTIQTQMQEKNLNFSQLVLNSLLHQNSQTPIKSKKQKAIANKELVIELAKWGNNLNQIAKFL
NTN
>Mature_83_residues
MNTNKQIIKSLRLSQKQWQTIQTQMQEKNLNFSQLVLNSLLHQNSQTPIKSKKQKAIANKELVIELAKWGNNLNQIAKFL
NTN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9646; Mature: 9646

Theoretical pI: Translated: 11.22; Mature: 11.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTNKQIIKSLRLSQKQWQTIQTQMQEKNLNFSQLVLNSLLHQNSQTPIKSKKQKAIANK
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
ELVIELAKWGNNLNQIAKFLNTN
HHHHHHHHHCCCHHHHHHHHCCC
>Mature Secondary Structure
MNTNKQIIKSLRLSQKQWQTIQTQMQEKNLNFSQLVLNSLLHQNSQTPIKSKKQKAIANK
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
ELVIELAKWGNNLNQIAKFLNTN
HHHHHHHHHCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA