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The map label for this gene is 108563807

Identifier: 108563807

GI number: 108563807

Start: 1431707

End: 1432237

Strand: Direct

Name: 108563807

Synonym: HPAG1_1382

Alternate gene names: NA

Gene position: 1431707-1432237 (Clockwise)

Preceding gene: 108563806

Following gene: 108563812

Centisome position: 89.69

GC content: 36.72

Gene sequence:

>531_bases
TTGTCGTTTGCTTCCAAAATGATCGCAAAAGTGTCTAATGGAATGTGTTTTTTGCCAAGCTATCTCTTAGAGCCATATGA
GAAACTGCTCACGCCTGAAGCTAGGAAACTTTTGGAACAACAGGCTCTAGATTGTTTGAAAAACGCCAAAACTGAAGCCG
ACAGAAAAGAATGTGTCAAAAACCTCCCCAAAAACTTGAGAAAAGAGATTTTAGATAAAAACAGCTTAGAAGCCTATAAA
ACGCCCCAAAAGTCAAGGACAAACCCGCTTAAAAAGGAAACCCCTAAGCTTTTAAACTCAGGGGAACTTTGGCTAATACA
TTACTTTTCTATAGAAAAGACCACTTTAAACCCCTTAAAAGAGATTTTAATGTATAATACTAACCAAGAGTTTTTACCAT
GTTTTCTTCGCATGATAAACCCTTTTAACCGTGATTTGCCCCATATCGTAACTATGGGGCGTGATGAAATCCTACAACAA
ACCCCCTTAAAATCTCATCTAATCAAAAACAAGGCGTTTTTAAAACATTAA

Upstream 100 bases:

>100_bases
AATTTCTCAACACTAATTAAAGGAGCGTTGTAATCATTTGAAAGCGCGCTAGCGATCAGATGACCCATGCTAGCTTTTTC
TGCAATGTAAAGATTAGGCA

Downstream 100 bases:

>100_bases
AGAATGAGCGTTATTAAGCGGTATTGTTTAAAACTAATGCTTCAAACAATCTTCAAACAAATATTGATGCTCGCCAGGTA
AAGCGTCAAATAAGGCTTTG

Product: cagY like protein

Products: NA

Alternate protein names: Cag Pathogenicity Island Protein; CagY Like Protein; Cag Pathogenicity Island -Like Protein; Cag Island Protein

Number of amino acids: Translated: 176; Mature: 175

Protein sequence:

>176_residues
MSFASKMIAKVSNGMCFLPSYLLEPYEKLLTPEARKLLEQQALDCLKNAKTEADRKECVKNLPKNLRKEILDKNSLEAYK
TPQKSRTNPLKKETPKLLNSGELWLIHYFSIEKTTLNPLKEILMYNTNQEFLPCFLRMINPFNRDLPHIVTMGRDEILQQ
TPLKSHLIKNKAFLKH

Sequences:

>Translated_176_residues
MSFASKMIAKVSNGMCFLPSYLLEPYEKLLTPEARKLLEQQALDCLKNAKTEADRKECVKNLPKNLRKEILDKNSLEAYK
TPQKSRTNPLKKETPKLLNSGELWLIHYFSIEKTTLNPLKEILMYNTNQEFLPCFLRMINPFNRDLPHIVTMGRDEILQQ
TPLKSHLIKNKAFLKH
>Mature_175_residues
SFASKMIAKVSNGMCFLPSYLLEPYEKLLTPEARKLLEQQALDCLKNAKTEADRKECVKNLPKNLRKEILDKNSLEAYKT
PQKSRTNPLKKETPKLLNSGELWLIHYFSIEKTTLNPLKEILMYNTNQEFLPCFLRMINPFNRDLPHIVTMGRDEILQQT
PLKSHLIKNKAFLKH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20531; Mature: 20400

Theoretical pI: Translated: 9.99; Mature: 9.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFASKMIAKVSNGMCFLPSYLLEPYEKLLTPEARKLLEQQALDCLKNAKTEADRKECVK
CCHHHHHHHHHHCCCEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
NLPKNLRKEILDKNSLEAYKTPQKSRTNPLKKETPKLLNSGELWLIHYFSIEKTTLNPLK
HHHHHHHHHHHCCCCCHHHCCCCCCCCCCCHHHHHHHHCCCCEEEEEEECCCHHHHHHHH
EILMYNTNQEFLPCFLRMINPFNRDLPHIVTMGRDEILQQTPLKSHLIKNKAFLKH
HHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHCCHHHHHHHCCHHHHHHHHHHHHCC
>Mature Secondary Structure 
SFASKMIAKVSNGMCFLPSYLLEPYEKLLTPEARKLLEQQALDCLKNAKTEADRKECVK
CHHHHHHHHHHCCCEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
NLPKNLRKEILDKNSLEAYKTPQKSRTNPLKKETPKLLNSGELWLIHYFSIEKTTLNPLK
HHHHHHHHHHHCCCCCHHHCCCCCCCCCCCHHHHHHHHCCCCEEEEEEECCCHHHHHHHH
EILMYNTNQEFLPCFLRMINPFNRDLPHIVTMGRDEILQQTPLKSHLIKNKAFLKH
HHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHCCHHHHHHHCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA