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The map label for this gene is 108563754

Identifier: 108563754

GI number: 108563754

Start: 1377643

End: 1380255

Strand: Reverse

Name: 108563754

Synonym: HPAG1_1329

Alternate gene names: NA

Gene position: 1380255-1377643 (Counterclockwise)

Preceding gene: 108563757

Following gene: 108563753

Centisome position: 86.46

GC content: 34.67

Gene sequence:

>2613_bases
TTGTTCGCTAGAGTCTCTAAAGTCAATCTCAAAACTTTACGCTATAATTTTCTCACTTTTTCATTAAGGGATTTCATGCA
AGATTCATTCATTCAAAGTTACCCCCCCCCCCCCCAATCAGCGATAAAAAATCATGCGTTAAATAACGCGCCCAATAATG
AAGAAATAGATCTACCCACCCACATCACCAGTAATTTAAAAAAAGAGCTTAGAGATTATCAAAAAAAAGCGATATATAAT
TATTTAGAAAAACGGCAATCCAACCCCACTCAAAAGCATTTCATGTTTGAAATGGCCACCGGTAGCGGCAAAACCTTAGT
GATGGCGGCTTTGATTTTAGAATGCTATAAGCAAGGCTATCAAAACTTTATCTTTTTTGTGAATAGCACCAGCATTTTAG
AAAAAACGAAATTGAATTTCACAGACAGCGCCTCATCAAAATACCTTTTTAGTGAGAATACCAATATCAATGATGAAAAC
ACAGAAATTAAAAGCATCAATAATTTAAACGAGAGCCACAACGGCGCTATCAACATTTATTTCAGCACCATTCAAGGCTT
GTTTTCATTATTCACTAAAGCTAAAGAAAACGCTATCACCCTAGAGGATTTAAAAGATCAAAAATTGGTTTTTTTAGCGG
ATGAAGCGCACCATTTAAACACAGAGACTAAAAAGAAATTAAATGATAGTGAGGCTAGTGAAAAACGCAATTGGGAAAGC
GTTGTGAAATTAGCCCTAGAACAAAATAAAGACAATTTATTGCTGGAATTTAGCGCCACTATCCCTAAAGAAAAAAGCGT
TGAAGAAAAATATAAAAACTTAAAGGCGTTCACTTACACCTTAAAAGAATTTAGCGAGGATAAATTTTGCAAAAACATCT
ACTCCCTTTCTTATGAAAATAAAGAATTAGAAACGCGCTTTTTAGGGGCATGCGTTTCAAGTTTGTATAAAGAATTATTA
GCCCAACACCATAATATTGAAAACTTTAAACCATGCATTTTGTTTAAAAGCGAAAGGATTGAAGACAGCAAAGAAAATCA
AGAGCGCTTCAACGCCTTTTTAGAAAATTTAAGCCCTTTAGATTTAGAAAATTTTTTCAATCACAGCCAAAACGCTTTTT
TTAAAGACGCTAAAAACTTTTTTGACAAGCAAAAATACACCCCTAACCTTGCCGCATTCTTGCAGACGAAATTCAAAAAA
AGCACCCAGATTAACACCAATAACGAAAAAGAATTAGAAAAGAGCATGCTTTTATTGAACTCCCTAGAAGACAGAGACAA
CCCTAAAAGAGTGATTTTTAGCGTGGATAAGCTCAATGAAGGTTGGGATGTGTTGAATTTGTTTGACATTGTCAGGCTTA
AAAACAAAGCGAGCCAAAAAGACACCACCAAAGACGCCCAACTCATAGGGCGAGGAGCGAGATACTACCCTTTTAGCTAT
AACGATTTCAAGCCAAACCGCATAGAGTTTTACCAACGCAAGTTTGATTTTTCCAACCCCTTAAGCGCGCTAGAGAGATT
AGACTACCATGCCGTTTATGACAGCGAGTTTATCGCTCAATTAAACAACGAGTTACAAGTTTTAGGATTAGGATTTGTAA
ATGAAAAACAGACTATCCCTTTAACACCCACCAAGCGTTTCAAATGCTACTATGCAAGCAATAAAAGAGACAAAAATAAA
AACCTATTCAATAAAGACTATACAGACCATGTTAAAGTCAAGCTCCAAAGTTTGCATGTCCCCTTATTTGCTTTTAATGT
GCGTGAAAAGAAAGTGGATTTTAAAGAAGAAAATAAAGGCGATAGAACTTATTATATACCCCATACCTTAGATAAAATCC
CTATAAATTATTTTTTAAAAGCCCTTAATTTAAAAAACCTGGATTTCAAGACGCTTAAAAAAGCCTTTAAAAAACATCCC
TTTAACAATAAAGTGGGATTTATAGAGCAATACATCTCTCATTTAAAAACAAACTTCCATAAAGACCAAAAGTTTGACGA
CAACAAAATACTTTTAAAACTCGCTGTTTATATCATTGAAAATTTAAAAGACGCGCTTTTAAAAGAGCAAGATAAATACG
AGGTGAGCGCGTTAGAATTGAAAGAATTTGAAACGCATAATAAAAGCCTTAGCTCTAGTGAATGGGAAAAAAGCATTCCC
CCCTATGAATGGCTGCTTTTTAAGGACATGCGAAAATTAGACAGCGATTTAGAAAGGGATTTTTTAGATTTTATCAATAA
AAATAAAGAGCTTTTAGACAAGAAATTCAAAGAATGGTGCGTTTTAAGGAACGATCATTTCACTGAATTAAAAGTTTTTT
GCAATATAGAAAACAGCCCTTATTACGCGCAAGGTTTTGAGCCGGATTTTATCCTTTTTGCCCAAACGCATAGCGATGAA
TTTTTAGGCTTCACTTGTTACATGGAAGCTAAAGGCGAGCATTTAGAGCTTTCTAACGCCTGGAAAGAAGAATTTTTGGA
AATGCTAGAAAACGCCACGCTTAAAAGCCATAACAAAAAACTCCATTTAAAAGGCTTGCCGTTTTTCACGCTCCACAATA
AAGTAGCAAATAGCGATTTTCAAACCGCTTTCGATCAAATTTTTAAGGATTAA

Upstream 100 bases:

>100_bases
TTTTGAGATTGATTATAGCAAAGAAAAAGAAGCGCTTTTGATTTTAAAGGCTTTATTCCATTAAATATTAAAACTAAAAC
TTTATTTGATTTTAATTTAA

Downstream 100 bases:

>100_bases
GAATGCTAAAAAACCCGCTAAAAACCCTACTAGATATTTTAATCAATCGTTTCACTAAAGAACGCTTAGAAACTTTAATC
CTACAAAATGATGAGAAGCT

Product: putative type III restriction enzyme R protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 870; Mature: 870

Protein sequence:

>870_residues
MFARVSKVNLKTLRYNFLTFSLRDFMQDSFIQSYPPPPQSAIKNHALNNAPNNEEIDLPTHITSNLKKELRDYQKKAIYN
YLEKRQSNPTQKHFMFEMATGSGKTLVMAALILECYKQGYQNFIFFVNSTSILEKTKLNFTDSASSKYLFSENTNINDEN
TEIKSINNLNESHNGAINIYFSTIQGLFSLFTKAKENAITLEDLKDQKLVFLADEAHHLNTETKKKLNDSEASEKRNWES
VVKLALEQNKDNLLLEFSATIPKEKSVEEKYKNLKAFTYTLKEFSEDKFCKNIYSLSYENKELETRFLGACVSSLYKELL
AQHHNIENFKPCILFKSERIEDSKENQERFNAFLENLSPLDLENFFNHSQNAFFKDAKNFFDKQKYTPNLAAFLQTKFKK
STQINTNNEKELEKSMLLLNSLEDRDNPKRVIFSVDKLNEGWDVLNLFDIVRLKNKASQKDTTKDAQLIGRGARYYPFSY
NDFKPNRIEFYQRKFDFSNPLSALERLDYHAVYDSEFIAQLNNELQVLGLGFVNEKQTIPLTPTKRFKCYYASNKRDKNK
NLFNKDYTDHVKVKLQSLHVPLFAFNVREKKVDFKEENKGDRTYYIPHTLDKIPINYFLKALNLKNLDFKTLKKAFKKHP
FNNKVGFIEQYISHLKTNFHKDQKFDDNKILLKLAVYIIENLKDALLKEQDKYEVSALELKEFETHNKSLSSSEWEKSIP
PYEWLLFKDMRKLDSDLERDFLDFINKNKELLDKKFKEWCVLRNDHFTELKVFCNIENSPYYAQGFEPDFILFAQTHSDE
FLGFTCYMEAKGEHLELSNAWKEEFLEMLENATLKSHNKKLHLKGLPFFTLHNKVANSDFQTAFDQIFKD

Sequences:

>Translated_870_residues
MFARVSKVNLKTLRYNFLTFSLRDFMQDSFIQSYPPPPQSAIKNHALNNAPNNEEIDLPTHITSNLKKELRDYQKKAIYN
YLEKRQSNPTQKHFMFEMATGSGKTLVMAALILECYKQGYQNFIFFVNSTSILEKTKLNFTDSASSKYLFSENTNINDEN
TEIKSINNLNESHNGAINIYFSTIQGLFSLFTKAKENAITLEDLKDQKLVFLADEAHHLNTETKKKLNDSEASEKRNWES
VVKLALEQNKDNLLLEFSATIPKEKSVEEKYKNLKAFTYTLKEFSEDKFCKNIYSLSYENKELETRFLGACVSSLYKELL
AQHHNIENFKPCILFKSERIEDSKENQERFNAFLENLSPLDLENFFNHSQNAFFKDAKNFFDKQKYTPNLAAFLQTKFKK
STQINTNNEKELEKSMLLLNSLEDRDNPKRVIFSVDKLNEGWDVLNLFDIVRLKNKASQKDTTKDAQLIGRGARYYPFSY
NDFKPNRIEFYQRKFDFSNPLSALERLDYHAVYDSEFIAQLNNELQVLGLGFVNEKQTIPLTPTKRFKCYYASNKRDKNK
NLFNKDYTDHVKVKLQSLHVPLFAFNVREKKVDFKEENKGDRTYYIPHTLDKIPINYFLKALNLKNLDFKTLKKAFKKHP
FNNKVGFIEQYISHLKTNFHKDQKFDDNKILLKLAVYIIENLKDALLKEQDKYEVSALELKEFETHNKSLSSSEWEKSIP
PYEWLLFKDMRKLDSDLERDFLDFINKNKELLDKKFKEWCVLRNDHFTELKVFCNIENSPYYAQGFEPDFILFAQTHSDE
FLGFTCYMEAKGEHLELSNAWKEEFLEMLENATLKSHNKKLHLKGLPFFTLHNKVANSDFQTAFDQIFKD
>Mature_870_residues
MFARVSKVNLKTLRYNFLTFSLRDFMQDSFIQSYPPPPQSAIKNHALNNAPNNEEIDLPTHITSNLKKELRDYQKKAIYN
YLEKRQSNPTQKHFMFEMATGSGKTLVMAALILECYKQGYQNFIFFVNSTSILEKTKLNFTDSASSKYLFSENTNINDEN
TEIKSINNLNESHNGAINIYFSTIQGLFSLFTKAKENAITLEDLKDQKLVFLADEAHHLNTETKKKLNDSEASEKRNWES
VVKLALEQNKDNLLLEFSATIPKEKSVEEKYKNLKAFTYTLKEFSEDKFCKNIYSLSYENKELETRFLGACVSSLYKELL
AQHHNIENFKPCILFKSERIEDSKENQERFNAFLENLSPLDLENFFNHSQNAFFKDAKNFFDKQKYTPNLAAFLQTKFKK
STQINTNNEKELEKSMLLLNSLEDRDNPKRVIFSVDKLNEGWDVLNLFDIVRLKNKASQKDTTKDAQLIGRGARYYPFSY
NDFKPNRIEFYQRKFDFSNPLSALERLDYHAVYDSEFIAQLNNELQVLGLGFVNEKQTIPLTPTKRFKCYYASNKRDKNK
NLFNKDYTDHVKVKLQSLHVPLFAFNVREKKVDFKEENKGDRTYYIPHTLDKIPINYFLKALNLKNLDFKTLKKAFKKHP
FNNKVGFIEQYISHLKTNFHKDQKFDDNKILLKLAVYIIENLKDALLKEQDKYEVSALELKEFETHNKSLSSSEWEKSIP
PYEWLLFKDMRKLDSDLERDFLDFINKNKELLDKKFKEWCVLRNDHFTELKVFCNIENSPYYAQGFEPDFILFAQTHSDE
FLGFTCYMEAKGEHLELSNAWKEEFLEMLENATLKSHNKKLHLKGLPFFTLHNKVANSDFQTAFDQIFKD

Specific function: Unknown

COG id: COG3421

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014001
- InterPro:   IPR006935 [H]

Pfam domain/function: PF04851 ResIII [H]

EC number: =3.1.21.5 [H]

Molecular weight: Translated: 102476; Mature: 102476

Theoretical pI: Translated: 8.31; Mature: 8.31

Prosite motif: PS00132 CARBOXYPEPT_ZN_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFARVSKVNLKTLRYNFLTFSLRDFMQDSFIQSYPPPPQSAIKNHALNNAPNNEEIDLPT
CCCCCCCCCHHHEEEHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCCCH
HITSNLKKELRDYQKKAIYNYLEKRQSNPTQKHFMFEMATGSGKTLVMAALILECYKQGY
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHEEEEEECCCCCHHHHHHHHHHHHHHCC
QNFIFFVNSTSILEKTKLNFTDSASSKYLFSENTNINDENTEIKSINNLNESHNGAINIY
CEEEEEEECCHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCHHHHHHCCCCCCCCEEEEE
FSTIQGLFSLFTKAKENAITLEDLKDQKLVFLADEAHHLNTETKKKLNDSEASEKRNWES
HHHHHHHHHHHHHHCCCCEEHHCCCCCEEEEEECCCHHCCCHHHHHCCCHHHHHHHCHHH
VVKLALEQNKDNLLLEFSATIPKEKSVEEKYKNLKAFTYTLKEFSEDKFCKNIYSLSYEN
HHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCC
KELETRFLGACVSSLYKELLAQHHNIENFKPCILFKSERIEDSKENQERFNAFLENLSPL
CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCC
DLENFFNHSQNAFFKDAKNFFDKQKYTPNLAAFLQTKFKKSTQINTNNEKELEKSMLLLN
CHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
SLEDRDNPKRVIFSVDKLNEGWDVLNLFDIVRLKNKASQKDTTKDAQLIGRGARYYPFSY
HHCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCEECCCCC
NDFKPNRIEFYQRKFDFSNPLSALERLDYHAVYDSEFIAQLNNELQVLGLGFVNEKQTIP
CCCCCCHHHHHHHHCCCCCHHHHHHHCCHHHHCCHHHHHHHCCCEEEEEEEECCCCCEEC
LTPTKRFKCYYASNKRDKNKNLFNKDYTDHVKVKLQSLHVPLFAFNVREKKVDFKEENKG
CCCCCCEEEEECCCCCCCCCCCCCCCCCHHHEEEEEHCCCEEEEECCHHHCCCCCCCCCC
DRTYYIPHTLDKIPINYFLKALNLKNLDFKTLKKAFKKHPFNNKVGFIEQYISHLKTNFH
CEEEECCCCCHHCCHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCC
KDQKFDDNKILLKLAVYIIENLKDALLKEQDKYEVSALELKEFETHNKSLSSSEWEKSIP
CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHCCC
PYEWLLFKDMRKLDSDLERDFLDFINKNKELLDKKFKEWCVLRNDHFTELKVFCNIENSP
CHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCC
YYAQGFEPDFILFAQTHSDEFLGFTCYMEAKGEHLELSNAWKEEFLEMLENATLKSHNKK
CCCCCCCCCEEEEEECCCCCEEEEEEEEECCCCEEEHHHHHHHHHHHHHHCCHHHCCCCE
LHLKGLPFFTLHNKVANSDFQTAFDQIFKD
EEECCCCEEEEHHHHCCCHHHHHHHHHHCC
>Mature Secondary Structure
MFARVSKVNLKTLRYNFLTFSLRDFMQDSFIQSYPPPPQSAIKNHALNNAPNNEEIDLPT
CCCCCCCCCHHHEEEHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCCCH
HITSNLKKELRDYQKKAIYNYLEKRQSNPTQKHFMFEMATGSGKTLVMAALILECYKQGY
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHEEEEEECCCCCHHHHHHHHHHHHHHCC
QNFIFFVNSTSILEKTKLNFTDSASSKYLFSENTNINDENTEIKSINNLNESHNGAINIY
CEEEEEEECCHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCHHHHHHCCCCCCCCEEEEE
FSTIQGLFSLFTKAKENAITLEDLKDQKLVFLADEAHHLNTETKKKLNDSEASEKRNWES
HHHHHHHHHHHHHHCCCCEEHHCCCCCEEEEEECCCHHCCCHHHHHCCCHHHHHHHCHHH
VVKLALEQNKDNLLLEFSATIPKEKSVEEKYKNLKAFTYTLKEFSEDKFCKNIYSLSYEN
HHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCC
KELETRFLGACVSSLYKELLAQHHNIENFKPCILFKSERIEDSKENQERFNAFLENLSPL
CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCC
DLENFFNHSQNAFFKDAKNFFDKQKYTPNLAAFLQTKFKKSTQINTNNEKELEKSMLLLN
CHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
SLEDRDNPKRVIFSVDKLNEGWDVLNLFDIVRLKNKASQKDTTKDAQLIGRGARYYPFSY
HHCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCEECCCCC
NDFKPNRIEFYQRKFDFSNPLSALERLDYHAVYDSEFIAQLNNELQVLGLGFVNEKQTIP
CCCCCCHHHHHHHHCCCCCHHHHHHHCCHHHHCCHHHHHHHCCCEEEEEEEECCCCCEEC
LTPTKRFKCYYASNKRDKNKNLFNKDYTDHVKVKLQSLHVPLFAFNVREKKVDFKEENKG
CCCCCCEEEEECCCCCCCCCCCCCCCCCHHHEEEEEHCCCEEEEECCHHHCCCCCCCCCC
DRTYYIPHTLDKIPINYFLKALNLKNLDFKTLKKAFKKHPFNNKVGFIEQYISHLKTNFH
CEEEECCCCCHHCCHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCC
KDQKFDDNKILLKLAVYIIENLKDALLKEQDKYEVSALELKEFETHNKSLSSSEWEKSIP
CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHCCC
PYEWLLFKDMRKLDSDLERDFLDFINKNKELLDKKFKEWCVLRNDHFTELKVFCNIENSP
CHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCC
YYAQGFEPDFILFAQTHSDEFLGFTCYMEAKGEHLELSNAWKEEFLEMLENATLKSHNKK
CCCCCCCCCEEEEEECCCCCEEEEEEEEECCCCEEEHHHHHHHHHHHHHHCCHHHCCCCE
LHLKGLPFFTLHNKVANSDFQTAFDQIFKD
EEECCCCEEEEHHHHCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]