| Definition | Helicobacter pylori HPAG1 chromosome, complete genome. |
|---|---|
| Accession | NC_008086 |
| Length | 1,596,366 |
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The map label for this gene is 108563757
Identifier: 108563757
GI number: 108563757
Start: 1382139
End: 1382348
Strand: Reverse
Name: 108563757
Synonym: HPAG1_1332
Alternate gene names: NA
Gene position: 1382348-1382139 (Counterclockwise)
Preceding gene: 108563758
Following gene: 108563754
Centisome position: 86.59
GC content: 22.86
Gene sequence:
>210_bases ATGGATTTAAGAAAAAAGTTTTATTCTTTATTCTTTATTCTTTATTCTTTATTCTTTATTCTTTATTCTTTATTCTTTAT TCTTTATTCTTTATTCTTTATTCTTTATTCTTCCGCTGGTGATTGCTTTTTATTTCTTTTATTTTTAACTTTTTTAGTTG GGGTTGGTATGGGGTTGTGTTTGAATGGTTTTTGTGTTTTAGATTTTTAG
Upstream 100 bases:
>100_bases AGCGATAAAATAAAACTTAAAATCATAACATAAGATCTAAAATCCAATTTTTTAGAAAGTTTAATATCTTTGGTGAGAAA AGAGTCTGCATCAATTAAAC
Downstream 100 bases:
>100_bases AACCGATCTAAAAGAAAACTTTTTCATCAAGTTTCTTTTTTAAAAAAGCCTAAAAATTTCCTAAACACTTCTTTAGGATC GTATGTATCACACACCTTGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 69; Mature: 69
Protein sequence:
>69_residues MDLRKKFYSLFFILYSLFFILYSLFFILYSLFFILYSSAGDCFLFLLFLTFLVGVGMGLCLNGFCVLDF
Sequences:
>Translated_69_residues MDLRKKFYSLFFILYSLFFILYSLFFILYSLFFILYSSAGDCFLFLLFLTFLVGVGMGLCLNGFCVLDF >Mature_69_residues MDLRKKFYSLFFILYSLFFILYSLFFILYSLFFILYSSAGDCFLFLLFLTFLVGVGMGLCLNGFCVLDF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8139; Mature: 8139
Theoretical pI: Translated: 6.23; Mature: 6.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.3 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 7.2 %Cys+Met (Translated Protein) 4.3 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 7.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDLRKKFYSLFFILYSLFFILYSLFFILYSLFFILYSSAGDCFLFLLFLTFLVGVGMGLC CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH LNGFCVLDF HCCCHHCCC >Mature Secondary Structure MDLRKKFYSLFFILYSLFFILYSLFFILYSLFFILYSSAGDCFLFLLFLTFLVGVGMGLC CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH LNGFCVLDF HCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA