Click here to switch to the map view.

The map label for this gene is 108563215

Identifier: 108563215

GI number: 108563215

Start: 827458

End: 828342

Strand: Reverse

Name: 108563215

Synonym: HPAG1_0790

Alternate gene names: NA

Gene position: 828342-827458 (Counterclockwise)

Preceding gene: 108563217

Following gene: 108563214

Centisome position: 51.89

GC content: 36.16

Gene sequence:

>885_bases
TTGATTTTATTTGTATTAAGAATTAAGGCTAACATGCGTGTTTTTATTATTCATTTAAGCCCAAAAACCTGTCAAAATTT
TTCTTTAAAAGAAACTCATATAACCCCCCTTTTAGAGAGCCTTAAACTTCAAGGGATCTCTTATGAAATTTTTGATGCGA
TCTATTCTAAAATCTCTCCCACTCAATTACACCCCTTGATTTTAGAGCATTTGCACCCTTCTTTTATGGTTGAAGATTTA
TGGGCTTTTTGTAAAAATAAAAAACACCCCCCTTGCGCGTTAAAAAATTTCTTTTACGCGCTCAAGCATTGCGGGAAGAG
AATGGGGTTTGGGGAGCTTGGGTGCTATGCGAGCCATTATTCATTGTGGAAAAAATGCATAGAACTCAATGAAGCGATCT
GTATTTTAGAAGATGATATTATTGTAAAAGAGCGTTTTAAAGAGAGCTTGGAGTTTTGCCGCCAGCACATCAATGAATTA
GGCTATATCCGTTTGATGCATTTAGAAGAAAATGTGGCTAAGCAAAAAACTCCCGTTAAAGGGGTTTCTCAAATCTTAAA
TTTTAAAGATGGCATTGGCACTCAAGGGTATGTTTTAGCCCCCAAAGCCGCGCAAAAATTATTGAAATACAGCGCGAAAG
AATGGGTGATGCCTATAGATTGCGTGATGGATAGGCATTATTGGCATGGGGTCAAAAACTATGTGTTAGAAGAATTTGCG
ATTGCTTGCGATGGAATGAATTCTCAAAACTCCAACACAGAAAAACAAAGGCCTAAAAAATTACCTTTAAGCATCAGGAT
TGGCCGCTTTTTGCATAAAAACGCGGTTAAAATCTTGGATAAAGTTTTTAGGTATAGCCCAAAATTAATCATTAGAAAAA
ACTAA

Upstream 100 bases:

>100_bases
GGGTTTTGATTTTTTCACTTTTTTGAATGGTAATAGGAATATCATCTAACATGATGCGTATTTTACTAAAATTTGCGCTA
GAATGTAAGTCTGTTTAATA

Downstream 100 bases:

>100_bases
TCATTAGGCTTTGCAAACATTAGAATGAGTCTTTGAGCATTTCTTGCATGATAGGGGAAGCTTCATTCAATTGATTTAAA
GGCTTTAGCGGTTTGTATCT

Product: lipooligosaccharide 5G8 epitope biosynthesis-associated protein

Products: NA

Alternate protein names: Beta-1 4-Galactosyltransferase; Lipopolysaccharide Biosynthesis Protein; Glycosyltransferase; Lex2B Protein; Pbeta-1 4-Galactosyltransferase; 50S Ribosomal Protein L; Glycosyl Transferase Family; LPS Glycosyltransferase Subfamily Protein; Lipooligosaccharide 5G8 Epitope Biosynthesis-Protein; Glycosyltransferase WavM; Lipooligosaccharide Biosynthesis Glycosyltransferase; Lob1 Protein; Glycosyl Transferase

Number of amino acids: Translated: 294; Mature: 294

Protein sequence:

>294_residues
MILFVLRIKANMRVFIIHLSPKTCQNFSLKETHITPLLESLKLQGISYEIFDAIYSKISPTQLHPLILEHLHPSFMVEDL
WAFCKNKKHPPCALKNFFYALKHCGKRMGFGELGCYASHYSLWKKCIELNEAICILEDDIIVKERFKESLEFCRQHINEL
GYIRLMHLEENVAKQKTPVKGVSQILNFKDGIGTQGYVLAPKAAQKLLKYSAKEWVMPIDCVMDRHYWHGVKNYVLEEFA
IACDGMNSQNSNTEKQRPKKLPLSIRIGRFLHKNAVKILDKVFRYSPKLIIRKN

Sequences:

>Translated_294_residues
MILFVLRIKANMRVFIIHLSPKTCQNFSLKETHITPLLESLKLQGISYEIFDAIYSKISPTQLHPLILEHLHPSFMVEDL
WAFCKNKKHPPCALKNFFYALKHCGKRMGFGELGCYASHYSLWKKCIELNEAICILEDDIIVKERFKESLEFCRQHINEL
GYIRLMHLEENVAKQKTPVKGVSQILNFKDGIGTQGYVLAPKAAQKLLKYSAKEWVMPIDCVMDRHYWHGVKNYVLEEFA
IACDGMNSQNSNTEKQRPKKLPLSIRIGRFLHKNAVKILDKVFRYSPKLIIRKN
>Mature_294_residues
MILFVLRIKANMRVFIIHLSPKTCQNFSLKETHITPLLESLKLQGISYEIFDAIYSKISPTQLHPLILEHLHPSFMVEDL
WAFCKNKKHPPCALKNFFYALKHCGKRMGFGELGCYASHYSLWKKCIELNEAICILEDDIIVKERFKESLEFCRQHINEL
GYIRLMHLEENVAKQKTPVKGVSQILNFKDGIGTQGYVLAPKAAQKLLKYSAKEWVMPIDCVMDRHYWHGVKNYVLEEFA
IACDGMNSQNSNTEKQRPKKLPLSIRIGRFLHKNAVKILDKVFRYSPKLIIRKN

Specific function: Unknown

COG id: COG3306

COG function: function code M; Glycosyltransferase involved in LPS biosynthesis

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34209; Mature: 34209

Theoretical pI: Translated: 9.71; Mature: 9.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
3.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILFVLRIKANMRVFIIHLSPKTCQNFSLKETHITPLLESLKLQGISYEIFDAIYSKISP
CEEEEEEEECCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCC
TQLHPLILEHLHPSFMVEDLWAFCKNKKHPPCALKNFFYALKHCGKRMGFGELGCYASHY
CHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
SLWKKCIELNEAICILEDDIIVKERFKESLEFCRQHINELGYIRLMHLEENVAKQKTPVK
HHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHCCEEEEEHHHHHHHHCCCHH
GVSQILNFKDGIGTQGYVLAPKAAQKLLKYSAKEWVMPIDCVMDRHYWHGVKNYVLEEFA
HHHHHHHHHCCCCCCCEEECCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
IACDGMNSQNSNTEKQRPKKLPLSIRIGRFLHKNAVKILDKVFRYSPKLIIRKN
HHHCCCCCCCCCCHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCEEEECC
>Mature Secondary Structure
MILFVLRIKANMRVFIIHLSPKTCQNFSLKETHITPLLESLKLQGISYEIFDAIYSKISP
CEEEEEEEECCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCC
TQLHPLILEHLHPSFMVEDLWAFCKNKKHPPCALKNFFYALKHCGKRMGFGELGCYASHY
CHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
SLWKKCIELNEAICILEDDIIVKERFKESLEFCRQHINELGYIRLMHLEENVAKQKTPVK
HHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHCCEEEEEHHHHHHHHCCCHH
GVSQILNFKDGIGTQGYVLAPKAAQKLLKYSAKEWVMPIDCVMDRHYWHGVKNYVLEEFA
HHHHHHHHHCCCCCCCEEECCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
IACDGMNSQNSNTEKQRPKKLPLSIRIGRFLHKNAVKILDKVFRYSPKLIIRKN
HHHCCCCCCCCCCHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA