Definition Helicobacter pylori HPAG1 chromosome, complete genome.
Accession NC_008086
Length 1,596,366

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The map label for this gene is fecA [H]

Identifier: 108563217

GI number: 108563217

Start: 829014

End: 831392

Strand: Reverse

Name: fecA [H]

Synonym: HPAG1_0792

Alternate gene names: 108563217

Gene position: 831392-829014 (Counterclockwise)

Preceding gene: 108563218

Following gene: 108563215

Centisome position: 52.08

GC content: 42.16

Gene sequence:

>2379_bases
ATGAATGGTTATTTGAGGGTAAAAACCCCGTATTTTTTAGCGTTGGGCGTTTTGATTTTTTGGGCTTTTAATTCTTTTAT
GAGCGCGAAAGATAAGCACCATTTTTTAAAAAAAGTTACAACCACTGAGCAAAAATTCAATTCCAGCGCGCCGCTTTCAT
ATCAAAGCGAAGAGGTGCGTAATTCCACAAGCTCTCGCACGGTGATTTCCAACAAAGAACTCAAAAAAACGGGGAATTTG
AATATTGAAAACGCCTTGCAAAACGTGCCAGGGATTCAAATCAGAGACGCTACAGGCACAGGCGTGCTACCTAAAATTTC
GGTGCGCGGTTTTGGTGGGGGCGGTAACGGGCATAGCAATACGGGCATGATTTTAGTCAATGGTATCCCCATTTATGGCG
CGCCGTATTCCAATATTGAACTGGCGATTTTCCCCGTTACTTTCCAGTCAGTGGATAGGATTGATGTGATTAAAGGGGGC
ACGAGCGTGCAATACGGCCCTAACACCTTTGGAGGCGTGGTGAATATCATCACTAAAGAAATCCCTAAAGAGTGGGAAAA
TCAAGCGGCTGAAAGGATCACTTTTTGGGGGCGATCCTCTAATGGGAATTTTGTAGATCCTAAAGAAAAAGGCAAGCCTT
TAGCACAAACTTTAGGCAATCAGATGCTGTTTAACACTTACGGGCGGACGGCTGGAATGTTGGGTAAGCATGTAGGAATT
AGCATGCAGGGCAATTGGATTAATGGGCAAGGTTTCAGGAAAAACAGCCCTACAAAGGTGCAAAACTACTTGCTTGATGC
GGTTTATAAGATTAATGCGACCAATACTTTTAAAGCTTATTACCAATATTATCAATACAATTCTTACCATCCAGGCACTT
TGAGCGCGCAAGATTATGCCTATAACCGCTTTATTAATGAGCGCCCTGACAATCAAGATGGAGGGCGAGCCAAGCGCTTT
GGGATCGTGTATCAAAATTATTTTGGCGACCCGGATAGGAAAGTGGGGGGAGATTTTAAATTCACTTATTTCACGCATGA
CATGAGCAGGGATTTTGGGTTTTCCAACCAATACCAAAGCGTGTATATGAGCAGTCAAAACAAGATTTTACCCTTTAAAG
GCAAGGGAAAAATTAGCGCGACTAACCCTAATTGCGGTTTGTATTCTTATAGCGACACGAATAGCCCTTGCTGGCAATTT
TTTGACAACTTGCGCCGCTTCGTGGTGAATGCTTTTGAGCCAAAACTCAATCTTATCGTCAATACCGGTAAAGTCAAGCA
AACTTTTAATATGGGAATGCGGTTTTTAACTGAAGATTTATACCGCCGATCCACCACCAGGAAAAACCCTAGCGTGCCTA
ATAATGGGAGTGGGTTTGATGCAGGAACTTCACTCAATAATTTCAACAATTATACCACTGTGTATGCCAGCGATGAAATC
AATTTCAATAACGGCATGCTAACGATCACGCCGGGTTTGAGATACACTTTTTTAAATTACGAAAAAAAAGACGCTCCCCC
TTTTAAAGCAGGCCAAACAGGAAAAACCATTAAAGATCGTTATAACCAATGGAATCCGGCGCTGAATATCGGCTATAAAC
CCATTAAGGATTGGTTGTTTTATTTCAATTACCAAAAAAGCTACATTCCGCCCCAATTCAGCAATATCGGTAATTTTGTA
GGCACAAGCACGGATTATTTTCAAATCTTTAATGTCATGGAGGGCGGCTCAAGATATTATTTTAACCATCAAGTGAGTTT
TAACGCGAACTATTTTGTGATTTTTGCGAATCATTATTTTACCGGGCGCTATGGAGATAATAAAGAGCCGGTCAATGCGA
GATCGCAAGGCGTGGAGCTGGAATTGTATTACACGCCTATTAGAGGGCTTAATTTCCATGCGGCTTACACTTTTATAGAC
GCTAATATCACCAGCCACACGATGGTTACTAACCCTGCTAATCCTAAAGGGCCTAAAAAAGATATTTTTGGCAAAAAACT
CCCTTTTGTCAGCCCGCACCAATTCATTTTAGACGCGAGTTACACTTACGCTAAAACCACGATTGGGTTAAGCTCTTTCT
TTTATAGCACGGCTTATAGCGATGTGTTAAACACCGTGCCTTTTACAGAATACGCGCCCACGATCAAAAATGGGGCCATC
ACCACCAAAACAGCGGGCATGACGCCATACTATTGGGTGTGGAATTTGCAAATTTCTAGCACTTTGTGGGAACGCAAAAA
GCAAAGCGTTAATGCGAGCTTGCAAATCAATAACATTTTTAACATGAAATATTGGTTTAGCGGGATAGGCACTAGCCCTA
ACGGGAAAGAAGCCGCACCTCCCAGAAGCATCACGGCGTATGTGAGCTATAATTTTTAA

Upstream 100 bases:

>100_bases
GAATTGTAAAAAAATAAGATTGATTTTCAATTCTTAAGATGATATAATAATTATTCTTATAGTATGCATCGGTTTGAATT
AAATGAGAAAGGTTATCATA

Downstream 100 bases:

>100_bases
TTTTAGGGTTGTAATGTTTTGAGAAGTTGGGCGTAAAAAATGATATTTTGTTTTAAACGCTCTCTTAGAGTGCGGTAATT
AGGGCAAAAGATTTGAACGC

Product: iron(III) dicitrate transport protein

Products: NA

Alternate protein names: Iron(III) dicitrate transport protein fecA [H]

Number of amino acids: Translated: 792; Mature: 792

Protein sequence:

>792_residues
MNGYLRVKTPYFLALGVLIFWAFNSFMSAKDKHHFLKKVTTTEQKFNSSAPLSYQSEEVRNSTSSRTVISNKELKKTGNL
NIENALQNVPGIQIRDATGTGVLPKISVRGFGGGGNGHSNTGMILVNGIPIYGAPYSNIELAIFPVTFQSVDRIDVIKGG
TSVQYGPNTFGGVVNIITKEIPKEWENQAAERITFWGRSSNGNFVDPKEKGKPLAQTLGNQMLFNTYGRTAGMLGKHVGI
SMQGNWINGQGFRKNSPTKVQNYLLDAVYKINATNTFKAYYQYYQYNSYHPGTLSAQDYAYNRFINERPDNQDGGRAKRF
GIVYQNYFGDPDRKVGGDFKFTYFTHDMSRDFGFSNQYQSVYMSSQNKILPFKGKGKISATNPNCGLYSYSDTNSPCWQF
FDNLRRFVVNAFEPKLNLIVNTGKVKQTFNMGMRFLTEDLYRRSTTRKNPSVPNNGSGFDAGTSLNNFNNYTTVYASDEI
NFNNGMLTITPGLRYTFLNYEKKDAPPFKAGQTGKTIKDRYNQWNPALNIGYKPIKDWLFYFNYQKSYIPPQFSNIGNFV
GTSTDYFQIFNVMEGGSRYYFNHQVSFNANYFVIFANHYFTGRYGDNKEPVNARSQGVELELYYTPIRGLNFHAAYTFID
ANITSHTMVTNPANPKGPKKDIFGKKLPFVSPHQFILDASYTYAKTTIGLSSFFYSTAYSDVLNTVPFTEYAPTIKNGAI
TTKTAGMTPYYWVWNLQISSTLWERKKQSVNASLQINNIFNMKYWFSGIGTSPNGKEAAPPRSITAYVSYNF

Sequences:

>Translated_792_residues
MNGYLRVKTPYFLALGVLIFWAFNSFMSAKDKHHFLKKVTTTEQKFNSSAPLSYQSEEVRNSTSSRTVISNKELKKTGNL
NIENALQNVPGIQIRDATGTGVLPKISVRGFGGGGNGHSNTGMILVNGIPIYGAPYSNIELAIFPVTFQSVDRIDVIKGG
TSVQYGPNTFGGVVNIITKEIPKEWENQAAERITFWGRSSNGNFVDPKEKGKPLAQTLGNQMLFNTYGRTAGMLGKHVGI
SMQGNWINGQGFRKNSPTKVQNYLLDAVYKINATNTFKAYYQYYQYNSYHPGTLSAQDYAYNRFINERPDNQDGGRAKRF
GIVYQNYFGDPDRKVGGDFKFTYFTHDMSRDFGFSNQYQSVYMSSQNKILPFKGKGKISATNPNCGLYSYSDTNSPCWQF
FDNLRRFVVNAFEPKLNLIVNTGKVKQTFNMGMRFLTEDLYRRSTTRKNPSVPNNGSGFDAGTSLNNFNNYTTVYASDEI
NFNNGMLTITPGLRYTFLNYEKKDAPPFKAGQTGKTIKDRYNQWNPALNIGYKPIKDWLFYFNYQKSYIPPQFSNIGNFV
GTSTDYFQIFNVMEGGSRYYFNHQVSFNANYFVIFANHYFTGRYGDNKEPVNARSQGVELELYYTPIRGLNFHAAYTFID
ANITSHTMVTNPANPKGPKKDIFGKKLPFVSPHQFILDASYTYAKTTIGLSSFFYSTAYSDVLNTVPFTEYAPTIKNGAI
TTKTAGMTPYYWVWNLQISSTLWERKKQSVNASLQINNIFNMKYWFSGIGTSPNGKEAAPPRSITAYVSYNF
>Mature_792_residues
MNGYLRVKTPYFLALGVLIFWAFNSFMSAKDKHHFLKKVTTTEQKFNSSAPLSYQSEEVRNSTSSRTVISNKELKKTGNL
NIENALQNVPGIQIRDATGTGVLPKISVRGFGGGGNGHSNTGMILVNGIPIYGAPYSNIELAIFPVTFQSVDRIDVIKGG
TSVQYGPNTFGGVVNIITKEIPKEWENQAAERITFWGRSSNGNFVDPKEKGKPLAQTLGNQMLFNTYGRTAGMLGKHVGI
SMQGNWINGQGFRKNSPTKVQNYLLDAVYKINATNTFKAYYQYYQYNSYHPGTLSAQDYAYNRFINERPDNQDGGRAKRF
GIVYQNYFGDPDRKVGGDFKFTYFTHDMSRDFGFSNQYQSVYMSSQNKILPFKGKGKISATNPNCGLYSYSDTNSPCWQF
FDNLRRFVVNAFEPKLNLIVNTGKVKQTFNMGMRFLTEDLYRRSTTRKNPSVPNNGSGFDAGTSLNNFNNYTTVYASDEI
NFNNGMLTITPGLRYTFLNYEKKDAPPFKAGQTGKTIKDRYNQWNPALNIGYKPIKDWLFYFNYQKSYIPPQFSNIGNFV
GTSTDYFQIFNVMEGGSRYYFNHQVSFNANYFVIFANHYFTGRYGDNKEPVNARSQGVELELYYTPIRGLNFHAAYTFID
ANITSHTMVTNPANPKGPKKDIFGKKLPFVSPHQFILDASYTYAKTTIGLSSFFYSTAYSDVLNTVPFTEYAPTIKNGAI
TTKTAGMTPYYWVWNLQISSTLWERKKQSVNASLQINNIFNMKYWFSGIGTSPNGKEAAPPRSITAYVSYNF

Specific function: FecA is the outer membrane receptor protein in the Fe(3+) dicitrate transport system [H]

COG id: COG4772

COG function: function code P; Outer membrane receptor for Fe3+-dicitrate

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tonB-dependent receptor family [H]

Homologues:

Organism=Escherichia coli, GI1790743, Length=750, Percent_Identity=24.5333333333333, Blast_Score=182, Evalue=8e-47,
Organism=Escherichia coli, GI1788478, Length=134, Percent_Identity=32.089552238806, Blast_Score=67, Evalue=6e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012910
- InterPro:   IPR011662
- InterPro:   IPR000531
- InterPro:   IPR010916
- InterPro:   IPR010917
- InterPro:   IPR010105 [H]

Pfam domain/function: PF07715 Plug; PF07660 STN; PF00593 TonB_dep_Rec [H]

EC number: NA

Molecular weight: Translated: 89613; Mature: 89613

Theoretical pI: Translated: 9.96; Mature: 9.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNGYLRVKTPYFLALGVLIFWAFNSFMSAKDKHHFLKKVTTTEQKFNSSAPLSYQSEEVR
CCCEEEECCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHH
NSTSSRTVISNKELKKTGNLNIENALQNVPGIQIRDATGTGVLPKISVRGFGGGGNGHSN
CCCCCCEEECCCHHHHCCCCCHHHHHHCCCCEEEECCCCCCCCCEEEEEEECCCCCCCCC
TGMILVNGIPIYGAPYSNIELAIFPVTFQSVDRIDVIKGGTSVQYGPNTFGGVVNIITKE
CCEEEEECEEEECCCCCCCEEEEEEEECCCCCEEEEEECCCEEEECCCHHHHHHHHHHHH
IPKEWENQAAERITFWGRSSNGNFVDPKEKGKPLAQTLGNQMLFNTYGRTAGMLGKHVGI
CCHHHHHHHHHEEEEEEECCCCCCCCCHHCCCHHHHHHCCCEEEHHCCCHHHHHHHHEEE
SMQGNWINGQGFRKNSPTKVQNYLLDAVYKINATNTFKAYYQYYQYNSYHPGTLSAQDYA
EEECCEECCCCCCCCCCHHHHHHHHHHEEEECCCCHHHHHHHHHHCCCCCCCCCCCCHHH
YNRFINERPDNQDGGRAKRFGIVYQNYFGDPDRKVGGDFKFTYFTHDMSRDFGFSNQYQS
HHHHHCCCCCCCCCCCEEEEEEEEHHHCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCE
VYMSSQNKILPFKGKGKISATNPNCGLYSYSDTNSPCWQFFDNLRRFVVNAFEPKLNLIV
EEECCCCCEEEECCCCEEEECCCCCCEEEECCCCCHHHHHHHHHHHHHHHHCCCCEEEEE
NTGKVKQTFNMGMRFLTEDLYRRSTTRKNPSVPNNGSGFDAGTSLNNFNNYTTVYASDEI
ECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCE
NFNNGMLTITPGLRYTFLNYEKKDAPPFKAGQTGKTIKDRYNQWNPALNIGYKPIKDWLF
ECCCCEEEECCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHCCCCEEECCCHHHHHHEE
YFNYQKSYIPPQFSNIGNFVGTSTDYFQIFNVMEGGSRYYFNHQVSFNANYFVIFANHYF
EEECCCCCCCCCHHHCCHHCCCCCHHHHHHHHHCCCCEEEEEEEEEECCCEEEEEEEEEE
TGRYGDNKEPVNARSQGVELELYYTPIRGLNFHAAYTFIDANITSHTMVTNPANPKGPKK
ECCCCCCCCCCCHHHCCEEEEEEEECCCCCEEEEEEEEEECCCCCCEEEECCCCCCCCCH
DIFGKKLPFVSPHQFILDASYTYAKTTIGLSSFFYSTAYSDVLNTVPFTEYAPTIKNGAI
HHCCCCCCCCCCCCEEEECCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEE
TTKTAGMTPYYWVWNLQISSTLWERKKQSVNASLQINNIFNMKYWFSGIGTSPNGKEAAP
EEECCCCCEEEEEEEEEEHHHHHHHHHHCCCCEEEEEEEEEEEEEEEECCCCCCCCCCCC
PRSITAYVSYNF
CCCEEEEEEECC
>Mature Secondary Structure
MNGYLRVKTPYFLALGVLIFWAFNSFMSAKDKHHFLKKVTTTEQKFNSSAPLSYQSEEVR
CCCEEEECCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHH
NSTSSRTVISNKELKKTGNLNIENALQNVPGIQIRDATGTGVLPKISVRGFGGGGNGHSN
CCCCCCEEECCCHHHHCCCCCHHHHHHCCCCEEEECCCCCCCCCEEEEEEECCCCCCCCC
TGMILVNGIPIYGAPYSNIELAIFPVTFQSVDRIDVIKGGTSVQYGPNTFGGVVNIITKE
CCEEEEECEEEECCCCCCCEEEEEEEECCCCCEEEEEECCCEEEECCCHHHHHHHHHHHH
IPKEWENQAAERITFWGRSSNGNFVDPKEKGKPLAQTLGNQMLFNTYGRTAGMLGKHVGI
CCHHHHHHHHHEEEEEEECCCCCCCCCHHCCCHHHHHHCCCEEEHHCCCHHHHHHHHEEE
SMQGNWINGQGFRKNSPTKVQNYLLDAVYKINATNTFKAYYQYYQYNSYHPGTLSAQDYA
EEECCEECCCCCCCCCCHHHHHHHHHHEEEECCCCHHHHHHHHHHCCCCCCCCCCCCHHH
YNRFINERPDNQDGGRAKRFGIVYQNYFGDPDRKVGGDFKFTYFTHDMSRDFGFSNQYQS
HHHHHCCCCCCCCCCCEEEEEEEEHHHCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCE
VYMSSQNKILPFKGKGKISATNPNCGLYSYSDTNSPCWQFFDNLRRFVVNAFEPKLNLIV
EEECCCCCEEEECCCCEEEECCCCCCEEEECCCCCHHHHHHHHHHHHHHHHCCCCEEEEE
NTGKVKQTFNMGMRFLTEDLYRRSTTRKNPSVPNNGSGFDAGTSLNNFNNYTTVYASDEI
ECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCE
NFNNGMLTITPGLRYTFLNYEKKDAPPFKAGQTGKTIKDRYNQWNPALNIGYKPIKDWLF
ECCCCEEEECCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHCCCCEEECCCHHHHHHEE
YFNYQKSYIPPQFSNIGNFVGTSTDYFQIFNVMEGGSRYYFNHQVSFNANYFVIFANHYF
EEECCCCCCCCCHHHCCHHCCCCCHHHHHHHHHCCCCEEEEEEEEEECCCEEEEEEEEEE
TGRYGDNKEPVNARSQGVELELYYTPIRGLNFHAAYTFIDANITSHTMVTNPANPKGPKK
ECCCCCCCCCCCHHHCCEEEEEEEECCCCCEEEEEEEEEECCCCCCEEEECCCCCCCCCH
DIFGKKLPFVSPHQFILDASYTYAKTTIGLSSFFYSTAYSDVLNTVPFTEYAPTIKNGAI
HHCCCCCCCCCCCCEEEECCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEE
TTKTAGMTPYYWVWNLQISSTLWERKKQSVNASLQINNIFNMKYWFSGIGTSPNGKEAAP
EEECCCCCEEEEEEEEEEHHHHHHHHHHCCCCEEEEEEEEEEEEEEEECCCCCCCCCCCC
PRSITAYVSYNF
CCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2836368; 7610040; 9278503; 2254251; 2651410 [H]