| Definition | Helicobacter pylori HPAG1 chromosome, complete genome. |
|---|---|
| Accession | NC_008086 |
| Length | 1,596,366 |
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The map label for this gene is 108563138
Identifier: 108563138
GI number: 108563138
Start: 751487
End: 752554
Strand: Reverse
Name: 108563138
Synonym: HPAG1_0713
Alternate gene names: NA
Gene position: 752554-751487 (Counterclockwise)
Preceding gene: 108563139
Following gene: 108563137
Centisome position: 47.14
GC content: 33.99
Gene sequence:
>1068_bases ATGAACCACCTTTTAATCCTTTATAACCCTTACTATCAAAAAGATGTGATCCAACAACATTTAAGCGTTTTACAGGAAAA ATCCCAAGTGGGCTTTGGTAAAATCCGATCAAAGCTCAACGATCAAGAAAAGCACGACTCTTTAGAAGAGATTTACAAAG CCACCAATGAAAAAAATTTTTTACAGCTTTTTTTGACCGATTATGCTAATTTATTTGCCGCTAAGGTGATAAAGGTTTCT AAAGAGATTGATGAGAGTTTGATCCCTAGCTATTATAAAGAAAAAAATTTGGAAGTGGAAGACTTTTTTATTATCAGCGA TTTAAGGGAATTAGTCAGGGAAGATTTTAGCCTTTTAAGGGATCAATTTTTAGCCAATTTCATTGCGCCAAACAACCACA CTTACGCCATTTATGGGAATAATTATGTCTATCCTTTGCCGGTGAGGCTAAAAGAAGAGCGTTCTTATTTTTTAGGCGAT GAAAAGCATTATCTGAGCGTGTATAAAAGCAAAGAATATTTAACCATGCAAGAAAATTTCATGCGTTTTGTTTTTGGCAA AAGGCTTTTTTACCTCTTACACCCTGATAGCATCAATAACATCATTCATGCAGAGTTAGAGCTTTTACAAAGCGAAAACG ATCTTTTGAATGATTTTACCAACATCATCGTCAAATACTCCAAAACCTTAGAATACGAAATTTATACTTTTGCTAAACAA GTTCTTTTAAAGGTTTGCAAAAAAGATCCCAACCTTTATGATTTGGATTATGAAGTCCAAGGAAAAACTTTGATACTTGA AGATTTCTTCACTCAAAAGCCTAATCTTGGGAGCGTTAAATTTTTACTCAGACACGAAAAAATCCAATACCATTTAGAAG AAAACTTAAATAGATTCATCAATTATCCTTTTTCAAAAAGCCTAAGCCTCATTCAAAACATCCGCAACGAAGCCGTTCAC GCAAAAGCTCCAGGTTTGAATGAAGTGGAAAAAATAAGGAATGAAATTTTAGGCATAGAAGGCGCAAGCTTACTCAAAGG CATTTTAACCCACAAGGAAACTTCATAA
Upstream 100 bases:
>100_bases ACGAATTGTTTGAAATTTTAAAAGATCTCATCCAAGAATACGAACAAAATCCTGACGAGATCAAGCAAAATCTCAAAGAA ATCCTAAAATAAGATAGGGC
Downstream 100 bases:
>100_bases AAGCACCATCAATTCAGCATGCGTTTAACACCGATTTGACAGCGCGAGATTTTAAAACCTATTTAGAGCCTTTAAGAGAG GGGAAAAATTTATTGGGTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 355; Mature: 355
Protein sequence:
>355_residues MNHLLILYNPYYQKDVIQQHLSVLQEKSQVGFGKIRSKLNDQEKHDSLEEIYKATNEKNFLQLFLTDYANLFAAKVIKVS KEIDESLIPSYYKEKNLEVEDFFIISDLRELVREDFSLLRDQFLANFIAPNNHTYAIYGNNYVYPLPVRLKEERSYFLGD EKHYLSVYKSKEYLTMQENFMRFVFGKRLFYLLHPDSINNIIHAELELLQSENDLLNDFTNIIVKYSKTLEYEIYTFAKQ VLLKVCKKDPNLYDLDYEVQGKTLILEDFFTQKPNLGSVKFLLRHEKIQYHLEENLNRFINYPFSKSLSLIQNIRNEAVH AKAPGLNEVEKIRNEILGIEGASLLKGILTHKETS
Sequences:
>Translated_355_residues MNHLLILYNPYYQKDVIQQHLSVLQEKSQVGFGKIRSKLNDQEKHDSLEEIYKATNEKNFLQLFLTDYANLFAAKVIKVS KEIDESLIPSYYKEKNLEVEDFFIISDLRELVREDFSLLRDQFLANFIAPNNHTYAIYGNNYVYPLPVRLKEERSYFLGD EKHYLSVYKSKEYLTMQENFMRFVFGKRLFYLLHPDSINNIIHAELELLQSENDLLNDFTNIIVKYSKTLEYEIYTFAKQ VLLKVCKKDPNLYDLDYEVQGKTLILEDFFTQKPNLGSVKFLLRHEKIQYHLEENLNRFINYPFSKSLSLIQNIRNEAVH AKAPGLNEVEKIRNEILGIEGASLLKGILTHKETS >Mature_355_residues MNHLLILYNPYYQKDVIQQHLSVLQEKSQVGFGKIRSKLNDQEKHDSLEEIYKATNEKNFLQLFLTDYANLFAAKVIKVS KEIDESLIPSYYKEKNLEVEDFFIISDLRELVREDFSLLRDQFLANFIAPNNHTYAIYGNNYVYPLPVRLKEERSYFLGD EKHYLSVYKSKEYLTMQENFMRFVFGKRLFYLLHPDSINNIIHAELELLQSENDLLNDFTNIIVKYSKTLEYEIYTFAKQ VLLKVCKKDPNLYDLDYEVQGKTLILEDFFTQKPNLGSVKFLLRHEKIQYHLEENLNRFINYPFSKSLSLIQNIRNEAVH AKAPGLNEVEKIRNEILGIEGASLLKGILTHKETS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41912; Mature: 41912
Theoretical pI: Translated: 6.45; Mature: 6.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNHLLILYNPYYQKDVIQQHLSVLQEKSQVGFGKIRSKLNDQEKHDSLEEIYKATNEKNF CCCEEEEECCCHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHCCCCHH LQLFLTDYANLFAAKVIKVSKEIDESLIPSYYKEKNLEVEDFFIISDLRELVREDFSLLR HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH DQFLANFIAPNNHTYAIYGNNYVYPLPVRLKEERSYFLGDEKHYLSVYKSKEYLTMQENF HHHHHHHCCCCCCEEEEECCCEEEECCCEEECCCCHHCCCCHHHHHHHCCCCHHHHHHHH MRFVFGKRLFYLLHPDSINNIIHAELELLQSENDLLNDFTNIIVKYSKTLEYEIYTFAKQ HHHHHHHHEEEEECCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH VLLKVCKKDPNLYDLDYEVQGKTLILEDFFTQKPNLGSVKFLLRHEKIQYHLEENLNRFI HHHHHHHCCCCEEECEEEECCCEEEEEHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH NYPFSKSLSLIQNIRNEAVHAKAPGLNEVEKIRNEILGIEGASLLKGILTHKETS CCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCC >Mature Secondary Structure MNHLLILYNPYYQKDVIQQHLSVLQEKSQVGFGKIRSKLNDQEKHDSLEEIYKATNEKNF CCCEEEEECCCHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHCCCCHH LQLFLTDYANLFAAKVIKVSKEIDESLIPSYYKEKNLEVEDFFIISDLRELVREDFSLLR HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH DQFLANFIAPNNHTYAIYGNNYVYPLPVRLKEERSYFLGDEKHYLSVYKSKEYLTMQENF HHHHHHHCCCCCCEEEEECCCEEEECCCEEECCCCHHCCCCHHHHHHHCCCCHHHHHHHH MRFVFGKRLFYLLHPDSINNIIHAELELLQSENDLLNDFTNIIVKYSKTLEYEIYTFAKQ HHHHHHHHEEEEECCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH VLLKVCKKDPNLYDLDYEVQGKTLILEDFFTQKPNLGSVKFLLRHEKIQYHLEENLNRFI HHHHHHHCCCCEEECEEEECCCEEEEEHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH NYPFSKSLSLIQNIRNEAVHAKAPGLNEVEKIRNEILGIEGASLLKGILTHKETS CCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA