| Definition | Helicobacter pylori HPAG1 chromosome, complete genome. |
|---|---|
| Accession | NC_008086 |
| Length | 1,596,366 |
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The map label for this gene is 108563139
Identifier: 108563139
GI number: 108563139
Start: 752563
End: 752868
Strand: Reverse
Name: 108563139
Synonym: HPAG1_0714
Alternate gene names: NA
Gene position: 752868-752563 (Counterclockwise)
Preceding gene: 108563140
Following gene: 108563138
Centisome position: 47.16
GC content: 34.64
Gene sequence:
>306_bases ATGTTTTCTAAAATTTGCCCAACTCTTAAGCTTTTAAACGCGTTTAAAAGCTCTTTATTCAAACGCATTTCAAGCCCTGG GCAAAGCACTCGCATTACCAAGATGGTTTTGGGTATAAAAGACGCTTTCAATAACGATAAAGATCCATTGAATAACGCTT GTGAAGCTTTGGATTTGGTAGTGAAATTTAAGAAAGAGCACCCGCAAGATTTTGACGAATTGTTTGAAATTTTAAAAGAT CTCATCCAAGAATACGAACAAAATCCTGACGAGATCAAGCAAAATCTCAAAGAAATCCTAAAATAA
Upstream 100 bases:
>100_bases ATGAACTGAATTTGTGTTAAAATACCGAATGTGCCAACGCTAGAACGCTTGCTAGTTTTTGGCTAGTAAGCGGTGTTTTA AATCTTTTAAAGGAAAAGCG
Downstream 100 bases:
>100_bases GATAGGGCATGAACCACCTTTTAATCCTTTATAACCCTTACTATCAAAAAGATGTGATCCAACAACATTTAAGCGTTTTA CAGGAAAAATCCCAAGTGGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 101; Mature: 101
Protein sequence:
>101_residues MFSKICPTLKLLNAFKSSLFKRISSPGQSTRITKMVLGIKDAFNNDKDPLNNACEALDLVVKFKKEHPQDFDELFEILKD LIQEYEQNPDEIKQNLKEILK
Sequences:
>Translated_101_residues MFSKICPTLKLLNAFKSSLFKRISSPGQSTRITKMVLGIKDAFNNDKDPLNNACEALDLVVKFKKEHPQDFDELFEILKD LIQEYEQNPDEIKQNLKEILK >Mature_101_residues MFSKICPTLKLLNAFKSSLFKRISSPGQSTRITKMVLGIKDAFNNDKDPLNNACEALDLVVKFKKEHPQDFDELFEILKD LIQEYEQNPDEIKQNLKEILK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11701; Mature: 11701
Theoretical pI: Translated: 7.25; Mature: 7.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFSKICPTLKLLNAFKSSLFKRISSPGQSTRITKMVLGIKDAFNNDKDPLNNACEALDLV CCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH VKFKKEHPQDFDELFEILKDLIQEYEQNPDEIKQNLKEILK HHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHC >Mature Secondary Structure MFSKICPTLKLLNAFKSSLFKRISSPGQSTRITKMVLGIKDAFNNDKDPLNNACEALDLV CCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH VKFKKEHPQDFDELFEILKDLIQEYEQNPDEIKQNLKEILK HHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA