| Definition | Helicobacter pylori HPAG1 chromosome, complete genome. |
|---|---|
| Accession | NC_008086 |
| Length | 1,596,366 |
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The map label for this gene is 108563118
Identifier: 108563118
GI number: 108563118
Start: 729684
End: 730028
Strand: Direct
Name: 108563118
Synonym: HPAG1_0693
Alternate gene names: NA
Gene position: 729684-730028 (Clockwise)
Preceding gene: 108563117
Following gene: 108563119
Centisome position: 45.71
GC content: 33.62
Gene sequence:
>345_bases ATGAATATCAAAACCCATTCTTCAAATGAAAAAGAACGCTTTGTGCGCATAGAAGAGGACGAAAAGAAAGAATTATTCGC TGGAACTGCAAATGAAAATTCGCACGGCCTTTCTTTAATGGCTTTAATAGGCGTGTTGGTTTTTGGGGGTGCGTTTTTAG CTCTGTTAGCACCTAAAATCTATTTAAGCAATAATATCTATTATATTAGCCGTAAAATCAACACCCTAGAAGATCAAAAA CGCCTGCTTTTAGAAGAACAACAAATCCTAAAAAACGAATTAGAAAAAGAGCGTTTTAAATACTACATAGAAAATAGTGA AAATATTGGCGATATTGCGTTTTAA
Upstream 100 bases:
>100_bases TCACTCCAAGCCCAGAAGAAATTAAAAACAACAGGCGTTCACGAAGCGCTAAAATGAGGGTTTTTCAATTCAAGCCATGA GTAAGTTATATGAGTAAGCC
Downstream 100 bases:
>100_bases GTGAAAAACCCCCTATCCCCTTAAGAGAGCCTAACTAATGCTTTGTTTCAATACGAAATGTAAAGCCCTTTTAAACCCTT AATGTTTAGAAAAAACCCCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 114; Mature: 114
Protein sequence:
>114_residues MNIKTHSSNEKERFVRIEEDEKKELFAGTANENSHGLSLMALIGVLVFGGAFLALLAPKIYLSNNIYYISRKINTLEDQK RLLLEEQQILKNELEKERFKYYIENSENIGDIAF
Sequences:
>Translated_114_residues MNIKTHSSNEKERFVRIEEDEKKELFAGTANENSHGLSLMALIGVLVFGGAFLALLAPKIYLSNNIYYISRKINTLEDQK RLLLEEQQILKNELEKERFKYYIENSENIGDIAF >Mature_114_residues MNIKTHSSNEKERFVRIEEDEKKELFAGTANENSHGLSLMALIGVLVFGGAFLALLAPKIYLSNNIYYISRKINTLEDQK RLLLEEQQILKNELEKERFKYYIENSENIGDIAF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13213; Mature: 13213
Theoretical pI: Translated: 5.26; Mature: 5.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIKTHSSNEKERFVRIEEDEKKELFAGTANENSHGLSLMALIGVLVFGGAFLALLAPKI CCCCCCCCCCHHHEEECCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHH YLSNNIYYISRKINTLEDQKRLLLEEQQILKNELEKERFKYYIENSENIGDIAF EECCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MNIKTHSSNEKERFVRIEEDEKKELFAGTANENSHGLSLMALIGVLVFGGAFLALLAPKI CCCCCCCCCCHHHEEECCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHH YLSNNIYYISRKINTLEDQKRLLLEEQQILKNELEKERFKYYIENSENIGDIAF EECCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA