| Definition | Helicobacter pylori HPAG1 chromosome, complete genome. |
|---|---|
| Accession | NC_008086 |
| Length | 1,596,366 |
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The map label for this gene is cheV [H]
Identifier: 108563022
GI number: 108563022
Start: 623792
End: 624733
Strand: Direct
Name: cheV [H]
Synonym: HPAG1_0597
Alternate gene names: 108563022
Gene position: 623792-624733 (Clockwise)
Preceding gene: 108563015
Following gene: 108563023
Centisome position: 39.08
GC content: 38.85
Gene sequence:
>942_bases GTGGTAAGAGGCATTGACAAAACGACTTCGTTGCACTTAAACAACGAAGCGCAATTTCTGTGTTTTAGATTAGATGGAGA AAAAGACGCCCAACTTTATGGCTTAAACATTTTTAAGATCCGAGAAATTATCCATTATGACGGAGAAGTTACAGAGATTC TTGGGGGGAGCGATGGCGTGATGCTCGGATTTCTTAGCGTTAGGGGCGAGTCTATCCCTTTAGTGGATGTGAAAAGGTGG TTGCATTATAACGCTAGTGATATAAGTCGCAATTTAAAAGAATACAGCGTTAAAGATGACCATAATTTGGTGATTGTGTG CCATTTTTCTAACCATTCCATCGCTCTAAAGGTTTTAAAAATTGAAAGGATCATCCATAAAAATTGGACTGAGATTAGCG CCGGGGACAAACAAGGCATTAATGAAGAGAGCAAGCTTAGTGCTATCACTCGTTTTGATGAAGAACGAGTGGTGCAGATC TTAGATGTGGAAAAGATGATTAGCGATGTTTTCCCTAGCTTGAAAGATTTAGACGATTTGACTTTGCGTTGCATAGAAGC CATTCAAAGCCAAAAACTCATTTTAATCGCTGAAGACTCTCTAAGCGCTCTTAAAACCCTAGAAAAGATCGTTCAAACTT TAGAATTGCGTTATTTAGCCTTTCCAAACGGGAGGGAATTGTTAGATTATTTGTATGAAAAAGAACATTACCAACAGGTC GGCGTGGTCATTACGGATTTAGAAATGCCCGTTATTTCAGGGTTTGAAGTGCTAAAAACCATTAAAGCTGATCATAGAAC TGAGCATCTTCCTGTGATTATCAATTCGTCCATGAGCAGCGATTCTAACCGCCAGTTAGCCCAATCTTTAGAAGCGGATG GTTTTGTGGTAAAATCTAACATTCTTGAAATCCATGAAATGCTTAAAAAAACGCTTTCATAA
Upstream 100 bases:
>100_bases TATTCTTTTTGGCTTTTTATCATGTTTGTAAAAACCTTTTAAACTAAATTAGGGTAGTATTATAACATTTAATCTTTGAT AGGTCTTTAGGGGAAATTAG
Downstream 100 bases:
>100_bases ATTTAATTTTTGTTTTAATTTAAAGGGATAAAACATGCGAAGTCATTTCTGCACAGAAATTAGTGAAAAAGATGTGGGTA AAACCATCAAAGTGGCCGGG
Product: chemotaxis protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 313; Mature: 313
Protein sequence:
>313_residues MVRGIDKTTSLHLNNEAQFLCFRLDGEKDAQLYGLNIFKIREIIHYDGEVTEILGGSDGVMLGFLSVRGESIPLVDVKRW LHYNASDISRNLKEYSVKDDHNLVIVCHFSNHSIALKVLKIERIIHKNWTEISAGDKQGINEESKLSAITRFDEERVVQI LDVEKMISDVFPSLKDLDDLTLRCIEAIQSQKLILIAEDSLSALKTLEKIVQTLELRYLAFPNGRELLDYLYEKEHYQQV GVVITDLEMPVISGFEVLKTIKADHRTEHLPVIINSSMSSDSNRQLAQSLEADGFVVKSNILEIHEMLKKTLS
Sequences:
>Translated_313_residues MVRGIDKTTSLHLNNEAQFLCFRLDGEKDAQLYGLNIFKIREIIHYDGEVTEILGGSDGVMLGFLSVRGESIPLVDVKRW LHYNASDISRNLKEYSVKDDHNLVIVCHFSNHSIALKVLKIERIIHKNWTEISAGDKQGINEESKLSAITRFDEERVVQI LDVEKMISDVFPSLKDLDDLTLRCIEAIQSQKLILIAEDSLSALKTLEKIVQTLELRYLAFPNGRELLDYLYEKEHYQQV GVVITDLEMPVISGFEVLKTIKADHRTEHLPVIINSSMSSDSNRQLAQSLEADGFVVKSNILEIHEMLKKTLS >Mature_313_residues MVRGIDKTTSLHLNNEAQFLCFRLDGEKDAQLYGLNIFKIREIIHYDGEVTEILGGSDGVMLGFLSVRGESIPLVDVKRW LHYNASDISRNLKEYSVKDDHNLVIVCHFSNHSIALKVLKIERIIHKNWTEISAGDKQGINEESKLSAITRFDEERVVQI LDVEKMISDVFPSLKDLDDLTLRCIEAIQSQKLILIAEDSLSALKTLEKIVQTLELRYLAFPNGRELLDYLYEKEHYQQV GVVITDLEMPVISGFEVLKTIKADHRTEHLPVIINSSMSSDSNRQLAQSLEADGFVVKSNILEIHEMLKKTLS
Specific function: Chemotaxis involves both a phosphorylation-dependent excitation and a methylation-dependent adaptation. CheV and CheW function together to couple CheA activation to methyl-accepting chemotaxis protein receptor status and possible CheA-dependent phosphoryl
COG id: COG0835
COG function: function code NT; Chemotaxis signal transduction protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002545 - InterPro: IPR011006 - InterPro: IPR001789 [H]
Pfam domain/function: PF01584 CheW; PF00072 Response_reg [H]
EC number: NA
Molecular weight: Translated: 35634; Mature: 35634
Theoretical pI: Translated: 5.27; Mature: 5.27
Prosite motif: PS50851 CHEW ; PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVRGIDKTTSLHLNNEAQFLCFRLDGEKDAQLYGLNIFKIREIIHYDGEVTEILGGSDGV CCCCCCCCEEEEECCCCEEEEEEECCCCCCEEECCHHHHHHHHHHCCCCEEECCCCCCCE MLGFLSVRGESIPLVDVKRWLHYNASDISRNLKEYSVKDDHNLVIVCHFSNHSIALKVLK EEEEEEECCCCCCHHHHHHHHCCCHHHHHHHHHHCCCCCCCCEEEEEEECCCCEEEEHHH IERIIHKNWTEISAGDKQGINEESKLSAITRFDEERVVQILDVEKMISDVFPSLKDLDDL HHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHCHHHH TLRCIEAIQSQKLILIAEDSLSALKTLEKIVQTLELRYLAFPNGRELLDYLYEKEHYQQV HHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHH GVVITDLEMPVISGFEVLKTIKADHRTEHLPVIINSSMSSDSNRQLAQSLEADGFVVKSN CEEEEECCCCHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHHHCCCCEEEHHH ILEIHEMLKKTLS HHHHHHHHHHHCC >Mature Secondary Structure MVRGIDKTTSLHLNNEAQFLCFRLDGEKDAQLYGLNIFKIREIIHYDGEVTEILGGSDGV CCCCCCCCEEEEECCCCEEEEEEECCCCCCEEECCHHHHHHHHHHCCCCEEECCCCCCCE MLGFLSVRGESIPLVDVKRWLHYNASDISRNLKEYSVKDDHNLVIVCHFSNHSIALKVLK EEEEEEECCCCCCHHHHHHHHCCCHHHHHHHHHHCCCCCCCCEEEEEEECCCCEEEEHHH IERIIHKNWTEISAGDKQGINEESKLSAITRFDEERVVQILDVEKMISDVFPSLKDLDDL HHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHCHHHH TLRCIEAIQSQKLILIAEDSLSALKTLEKIVQTLELRYLAFPNGRELLDYLYEKEHYQQV HHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHH GVVITDLEMPVISGFEVLKTIKADHRTEHLPVIINSSMSSDSNRQLAQSLEADGFVVKSN CEEEEECCCCHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHHHCCCCEEEHHH ILEIHEMLKKTLS HHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8169223; 9384377; 8169224 [H]