| Definition | Helicobacter pylori HPAG1 chromosome, complete genome. |
|---|---|
| Accession | NC_008086 |
| Length | 1,596,366 |
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The map label for this gene is 108562942
Identifier: 108562942
GI number: 108562942
Start: 540024
End: 540452
Strand: Reverse
Name: 108562942
Synonym: HPAG1_0517
Alternate gene names: NA
Gene position: 540452-540024 (Counterclockwise)
Preceding gene: 108562943
Following gene: 108562941
Centisome position: 33.86
GC content: 36.13
Gene sequence:
>429_bases ATGAAAACGAATTTTTATAAAATTAAATTACTATTTGCTTGGTGTCTTATCATTGGCATGTTTAACGCTCCGCTTAACGC TGACCAAAACACTGATATAAAAGATATTAGTCCTGAAGATATGGCGCTAAATAGCGTGGGGCTTGTTTCTAGAGATCAAC TAAAAATAGAGATCCCTAAAGAAACCCTAGAGCAAAAAGTGGCCATACTCAATGACTATAATGATAAAAATGTTAATATC AAATTTGACGACATAAGTTTAGGGAGTTTTCAACCTAATGATAATCTAGGCATCAATGCGATGTGGGGCATTCAAAATCT TCTCATGAGCCAAATGATGGGCGATTACGGTCCAAACAATCCTTTCATGTATGGCTATGCGCCAACATACTCAGATTCAT CGTTTTTACCACCGATCTTAGGGTATTAA
Upstream 100 bases:
>100_bases AAACAAAATGCTCGATCAAAAAAATCAAAACAAAAATAACGATTGAGTGGCGTTAATGCGCTAGAATAATGCTAAAAATA AGAATAAAGGAGTCAAAAAT
Downstream 100 bases:
>100_bases CTAGGAGAGTATTAACATGGCAGGTACACAAGCTATATATGAATCATCTTCTGCAGGCTTCTTATCGGAAATTTCCTCAA TCATCTCAAGCACGAGTGGT
Product: cag pathogenicity island protein G
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 142; Mature: 142
Protein sequence:
>142_residues MKTNFYKIKLLFAWCLIIGMFNAPLNADQNTDIKDISPEDMALNSVGLVSRDQLKIEIPKETLEQKVAILNDYNDKNVNI KFDDISLGSFQPNDNLGINAMWGIQNLLMSQMMGDYGPNNPFMYGYAPTYSDSSFLPPILGY
Sequences:
>Translated_142_residues MKTNFYKIKLLFAWCLIIGMFNAPLNADQNTDIKDISPEDMALNSVGLVSRDQLKIEIPKETLEQKVAILNDYNDKNVNI KFDDISLGSFQPNDNLGINAMWGIQNLLMSQMMGDYGPNNPFMYGYAPTYSDSSFLPPILGY >Mature_142_residues MKTNFYKIKLLFAWCLIIGMFNAPLNADQNTDIKDISPEDMALNSVGLVSRDQLKIEIPKETLEQKVAILNDYNDKNVNI KFDDISLGSFQPNDNLGINAMWGIQNLLMSQMMGDYGPNNPFMYGYAPTYSDSSFLPPILGY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16042; Mature: 16042
Theoretical pI: Translated: 4.20; Mature: 4.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 5.6 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 5.6 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTNFYKIKLLFAWCLIIGMFNAPLNADQNTDIKDISPEDMALNSVGLVSRDQLKIEIPK CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCEEEECCH ETLEQKVAILNDYNDKNVNIKFDDISLGSFQPNDNLGINAMWGIQNLLMSQMMGDYGPNN HHHHHHHHHHCCCCCCEEEEEECCEECCCCCCCCCCCCEEHHHHHHHHHHHHHHCCCCCC PFMYGYAPTYSDSSFLPPILGY CEEEECCCCCCCCCCCCHHCCC >Mature Secondary Structure MKTNFYKIKLLFAWCLIIGMFNAPLNADQNTDIKDISPEDMALNSVGLVSRDQLKIEIPK CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCEEEECCH ETLEQKVAILNDYNDKNVNIKFDDISLGSFQPNDNLGINAMWGIQNLLMSQMMGDYGPNN HHHHHHHHHHCCCCCCEEEEEECCEECCCCCCCCCCCCEEHHHHHHHHHHHHHHCCCCCC PFMYGYAPTYSDSSFLPPILGY CEEEECCCCCCCCCCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA