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The map label for this gene is 108562941

Identifier: 108562941

GI number: 108562941

Start: 538895

End: 540007

Strand: Reverse

Name: 108562941

Synonym: HPAG1_0516

Alternate gene names: NA

Gene position: 540007-538895 (Counterclockwise)

Preceding gene: 108562942

Following gene: 108562940

Centisome position: 33.83

GC content: 40.52

Gene sequence:

>1113_bases
ATGGCAGGTACACAAGCTATATATGAATCATCTTCTGCAGGCTTCTTATCGGAAATTTCCTCAATCATCTCAAGCACGAG
TGGTGTTGCAGGGCCATTTGCAGGAATAGTAGCGGGTGCTATGTCAGCAGCGATTATTCCTATTGTTGTGGGATTTACTA
ATCCGCAAATGACCGCTATCATGACCCAATACAATCAGAGCATCGCTGAAGCCGTAAGCATGCCTATGAAAGCCGCTAAC
CAACAATACAACCAATTGTATCAGGGTTTTAACGATCAAAGCATGGCTGTGGGGAACAATATCTTAAATATCAGCAAATT
AACAGGGGAATTTAACGCGCAAGGCAACACGCAAGGCGCGCAAATTAGTGCTGTTAATAGTCAGATTGCAAGCATTTTAG
CGAGTAACACTACCCCTAAAAATCCTAGTGCTATTGAAGCTTATGCGACGAATCAAATCGCTGTTCCTAGTGTGCCAACA
ACGGTTGAAATGATGAGCGGTATATTAGGCAATATTACAAGTGCAGCACCAAAATACGCCCTAGCTCTACAAGAGCAATT
GCGTTCTCAAGCAAGCAACAGCTCAATGAATGATACAGCCGATTCCCTTGATAGCTGTACCGCTTTAGGTGCGCTTGTTG
GCTCATCAAAAGTGTTTTTTAGTTGCATGCAAATTTCTATGACGCCCATGAGTGTTTCTATGCCCACTGTTTATGCCAAA
TACCAAGCGTTAGCTACTAATGCCCTAACTTCAGGCGCTAATCCTATGACCACTCCTGCATGCCCTATTGGGGACAAAGT
TCTTGTCGTTTATTGCTATGCTGAAAAAGTAGCAGAAATTTTGAGAGAATACTATATAGAATTTGTGAAAAACAATACCA
ATTTGTTGCAGAACGCTTCTCAAATGATACTTAATCAATCAGGATTAGCTACTAGCACCTATGACACTCAAGCGATTTCT
AACATAAGCTCGCTATATAATTACAATATAGTAGCGAATAAATCTTTTTTAAAATCGCATTTGACTTACCTTGATTACAT
CAAAGACAAGCTTAAGGGGCAAAAAGATAGCTACTTAACAGAAAGGGTGCAAACTAAAATAATCGTGAAGTGA

Upstream 100 bases:

>100_bases
TACGGTCCAAACAATCCTTTCATGTATGGCTATGCGCCAACATACTCAGATTCATCGTTTTTACCACCGATCTTAGGGTA
TTAACTAGGAGAGTATTAAC

Downstream 100 bases:

>100_bases
GGAAAGAGATGTGAAATATTTTTTAAGCATATTTTCTTTCTTGACTTTTTGTGGCTTGTCCTTGAATGGTGCAGGGGCAG
TAATAACGCTTGAACCTGCC

Product: cag pathogenicity island protein H

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 370; Mature: 369

Protein sequence:

>370_residues
MAGTQAIYESSSAGFLSEISSIISSTSGVAGPFAGIVAGAMSAAIIPIVVGFTNPQMTAIMTQYNQSIAEAVSMPMKAAN
QQYNQLYQGFNDQSMAVGNNILNISKLTGEFNAQGNTQGAQISAVNSQIASILASNTTPKNPSAIEAYATNQIAVPSVPT
TVEMMSGILGNITSAAPKYALALQEQLRSQASNSSMNDTADSLDSCTALGALVGSSKVFFSCMQISMTPMSVSMPTVYAK
YQALATNALTSGANPMTTPACPIGDKVLVVYCYAEKVAEILREYYIEFVKNNTNLLQNASQMILNQSGLATSTYDTQAIS
NISSLYNYNIVANKSFLKSHLTYLDYIKDKLKGQKDSYLTERVQTKIIVK

Sequences:

>Translated_370_residues
MAGTQAIYESSSAGFLSEISSIISSTSGVAGPFAGIVAGAMSAAIIPIVVGFTNPQMTAIMTQYNQSIAEAVSMPMKAAN
QQYNQLYQGFNDQSMAVGNNILNISKLTGEFNAQGNTQGAQISAVNSQIASILASNTTPKNPSAIEAYATNQIAVPSVPT
TVEMMSGILGNITSAAPKYALALQEQLRSQASNSSMNDTADSLDSCTALGALVGSSKVFFSCMQISMTPMSVSMPTVYAK
YQALATNALTSGANPMTTPACPIGDKVLVVYCYAEKVAEILREYYIEFVKNNTNLLQNASQMILNQSGLATSTYDTQAIS
NISSLYNYNIVANKSFLKSHLTYLDYIKDKLKGQKDSYLTERVQTKIIVK
>Mature_369_residues
AGTQAIYESSSAGFLSEISSIISSTSGVAGPFAGIVAGAMSAAIIPIVVGFTNPQMTAIMTQYNQSIAEAVSMPMKAANQ
QYNQLYQGFNDQSMAVGNNILNISKLTGEFNAQGNTQGAQISAVNSQIASILASNTTPKNPSAIEAYATNQIAVPSVPTT
VEMMSGILGNITSAAPKYALALQEQLRSQASNSSMNDTADSLDSCTALGALVGSSKVFFSCMQISMTPMSVSMPTVYAKY
QALATNALTSGANPMTTPACPIGDKVLVVYCYAEKVAEILREYYIEFVKNNTNLLQNASQMILNQSGLATSTYDTQAISN
ISSLYNYNIVANKSFLKSHLTYLDYIKDKLKGQKDSYLTERVQTKIIVK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39368; Mature: 39237

Theoretical pI: Translated: 5.96; Mature: 5.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGTQAIYESSSAGFLSEISSIISSTSGVAGPFAGIVAGAMSAAIIPIVVGFTNPQMTAI
CCCCHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHEEECCCCHHHHH
MTQYNQSIAEAVSMPMKAANQQYNQLYQGFNDQSMAVGNNILNISKLTGEFNAQGNTQGA
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCEEHHHHCCCCCCCCCCCCC
QISAVNSQIASILASNTTPKNPSAIEAYATNQIAVPSVPTTVEMMSGILGNITSAAPKYA
EEHHHHHHHHHHHHCCCCCCCCCCEEEECCCCEECCCCCHHHHHHHHHHHHHHHHCHHHH
LALQEQLRSQASNSSMNDTADSLDSCTALGALVGSSKVFFSCMQISMTPMSVSMPTVYAK
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCHHHHH
YQALATNALTSGANPMTTPACPIGDKVLVVYCYAEKVAEILREYYIEFVKNNTNLLQNAS
HHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHCCHHHHHHHH
QMILNQSGLATSTYDTQAISNISSLYNYNIVANKSFLKSHLTYLDYIKDKLKGQKDSYLT
HHHHCCCCCCCCCCHHHHHHHHHHHHCCCEEECHHHHHHHHHHHHHHHHHHCCCCHHHHH
ERVQTKIIVK
HHHHHHEECC
>Mature Secondary Structure 
AGTQAIYESSSAGFLSEISSIISSTSGVAGPFAGIVAGAMSAAIIPIVVGFTNPQMTAI
CCCHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHEEECCCCHHHHH
MTQYNQSIAEAVSMPMKAANQQYNQLYQGFNDQSMAVGNNILNISKLTGEFNAQGNTQGA
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCEEHHHHCCCCCCCCCCCCC
QISAVNSQIASILASNTTPKNPSAIEAYATNQIAVPSVPTTVEMMSGILGNITSAAPKYA
EEHHHHHHHHHHHHCCCCCCCCCCEEEECCCCEECCCCCHHHHHHHHHHHHHHHHCHHHH
LALQEQLRSQASNSSMNDTADSLDSCTALGALVGSSKVFFSCMQISMTPMSVSMPTVYAK
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCHHHHH
YQALATNALTSGANPMTTPACPIGDKVLVVYCYAEKVAEILREYYIEFVKNNTNLLQNAS
HHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHCCHHHHHHHH
QMILNQSGLATSTYDTQAISNISSLYNYNIVANKSFLKSHLTYLDYIKDKLKGQKDSYLT
HHHHCCCCCCCCCCHHHHHHHHHHHHCCCEEECHHHHHHHHHHHHHHHHHHCCCCHHHHH
ERVQTKIIVK
HHHHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA