| Definition | Helicobacter pylori HPAG1 chromosome, complete genome. |
|---|---|
| Accession | NC_008086 |
| Length | 1,596,366 |
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The map label for this gene is 108562695
Identifier: 108562695
GI number: 108562695
Start: 275896
End: 276138
Strand: Direct
Name: 108562695
Synonym: HPAG1_0270
Alternate gene names: NA
Gene position: 275896-276138 (Clockwise)
Preceding gene: 108562694
Following gene: 108562696
Centisome position: 17.28
GC content: 37.45
Gene sequence:
>243_bases ATGAAATTAGTTTTAGCCAAGAATACGAGAAAATCAGACGCTAAGAGCGTGGAATTAGAGGATTTGTATCGCAAATTCAG TGAAGACAAGCGTTCTATTTTCTATTTTGCCCCCACAAACGCCCACAAAGACATGCTCAAAGCGGTGGATTTTTTCAAAG AAAAAGGCCATACGGCTTATTTAGATGAGGTGAGGGTCAGCACTGATGAAAAAGATTTTCTTTATGAATTGCACATTATT TAA
Upstream 100 bases:
>100_bases AGTGGAACGCTTGTTTTTAGGGGGGAAAAGGGTAATCTAATTTGTTTTAAAGACAGAATGCGTTAAAATGAGAAATCTAA ATCAATTAAGGAAAGAGTCA
Downstream 100 bases:
>100_bases AGGCTTGTATTGAAAGTTTATATTGAAACCATGGGTTGTGCCATGAATTCTAGGGATAGCGAGCATCTACTAAGCGAACT ATCCAAACTAGACTATAAAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 80; Mature: 80
Protein sequence:
>80_residues MKLVLAKNTRKSDAKSVELEDLYRKFSEDKRSIFYFAPTNAHKDMLKAVDFFKEKGHTAYLDEVRVSTDEKDFLYELHII
Sequences:
>Translated_80_residues MKLVLAKNTRKSDAKSVELEDLYRKFSEDKRSIFYFAPTNAHKDMLKAVDFFKEKGHTAYLDEVRVSTDEKDFLYELHII >Mature_80_residues MKLVLAKNTRKSDAKSVELEDLYRKFSEDKRSIFYFAPTNAHKDMLKAVDFFKEKGHTAYLDEVRVSTDEKDFLYELHII
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9476; Mature: 9476
Theoretical pI: Translated: 7.77; Mature: 7.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLVLAKNTRKSDAKSVELEDLYRKFSEDKRSIFYFAPTNAHKDMLKAVDFFKEKGHTAY CEEEECCCCCCCCCCCCCHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCEEE LDEVRVSTDEKDFLYELHII ECCEECCCCCCCEEEEEECC >Mature Secondary Structure MKLVLAKNTRKSDAKSVELEDLYRKFSEDKRSIFYFAPTNAHKDMLKAVDFFKEKGHTAY CEEEECCCCCCCCCCCCCHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCEEE LDEVRVSTDEKDFLYELHII ECCEECCCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA