Definition Helicobacter pylori HPAG1 chromosome, complete genome.
Accession NC_008086
Length 1,596,366

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The map label for this gene is mtaD [H]

Identifier: 108562694

GI number: 108562694

Start: 274606

End: 275835

Strand: Direct

Name: mtaD [H]

Synonym: HPAG1_0269

Alternate gene names: 108562694

Gene position: 274606-275835 (Clockwise)

Preceding gene: 108562693

Following gene: 108562695

Centisome position: 17.2

GC content: 39.84

Gene sequence:

>1230_bases
ATGCAAGAAATCATAGGAGCGTCTTTAGTTTTTTTATGCAATGAAAAATGCGAAGTGTTAGAAGATTATGGCGTGGTCTT
TGATGAAAAGATTGTTGAAATAGGCGATTATCAAAGTTTAACGCTTAAATACCCCCACTTAAAGGCGCAGTTTTTTGAAA
ATTCCGTTCTGTTGCCCGCTTTTATCAACGCGCACACCCATTTTGAATTTTCCAACAACAAGGCGAGTTTTAATTACGGG
AGTTTTTCTAGTTGGTTAGGGAGCGTGTTAAACAATGGGGGGGCGATTTTAGAAAATTGCCAAGGGGCTATTCAAAACGC
CATCGCTGTGCAATTAAAAAGCGGGGTGGGGAGCGTGGGAGCGATTTCTAACCACCTGATAGAAGTTAATTTATTGAAAG
AAAGCCCCTTGAGTGCTGTCGTGTTTTTAGAGTTTTTAGGGAGCAGTTATTCTTTAGAAAAATTAAAGGCGTTTGAGGCC
AAGTTTAAGGAATTAAAAGATTTAGAAGATAAAAAACTTAAAGCGGCTCTCGCTGTGCATGCCCCTTATTCGGTCCAAAA
AGACATGGCTTTGAGCGTCATCCAATTAGCTAAAGATTCACAAAGCCTGCTTTCTACGCATTTTTTAGAATCGCTTGAAG
AATTAGAATGGGTAGAAAATTCTAAAGGGTGGTTTGAAAATTTTTACCAGCATTTTTTAAAAGAGTCTCATTTCAAATCG
CTCTATAAGGGCGCGAACGATTACATTGACATGTTTGAAGACACGCACACTTTATTTGTGCATAACCAGTTCGCTTCTTT
AGAAGCGTTAAAAAGGATTAAATCTCAAGTCAAAAACGCTTTTTTAATCACATGCCCCTTTTCTAACCGCTTGTTGAGCG
GGAAAGCGTTGGATTTAGAGAGAGTTAGAGAAGCTGGTTTGAGCGTGAGCGTCGCCACTGATGGCTTGAGCTCTAACGTT
TCTTTGAGCCTTTTAGACGAATTGAGGGCGTTCTTGCTCACCCATAACATGCCGTTGTTGGAATTAGCCAAGATCGCTCT
TTTAGGAGCGACTAGGCATGGGGCTAAAGCTTTAGCTTTAAATAATGGCGAGATAGAAGCCAATAAGAGGGCGGATTTGA
GCGTGTTTGGTTTTAATGAAAAATTCACTAAAGAGCAAGCAATTTTGCAATTTTTATTGCATGCTAAAGAAGTGGAACGC
TTGTTTTTAGGGGGGAAAAGGGTAATCTAA

Upstream 100 bases:

>100_bases
GAGTTAATAATCAAAATTCGCCCTTTTATGGTTTAGAATTATACGGCGAAGTTCAAAGAATGATTTTAAATGGGCAAACC
ACATTGATTAAGGAGAATGC

Downstream 100 bases:

>100_bases
TTTGTTTTAAAGACAGAATGCGTTAAAATGAGAAATCTAAATCAATTAAGGAAAGAGTCAATGAAATTAGTTTTAGCCAA
GAATACGAGAAAATCAGACG

Product: chlorohydrolase

Products: NA

Alternate protein names: MTA/SAH deaminase [H]

Number of amino acids: Translated: 409; Mature: 409

Protein sequence:

>409_residues
MQEIIGASLVFLCNEKCEVLEDYGVVFDEKIVEIGDYQSLTLKYPHLKAQFFENSVLLPAFINAHTHFEFSNNKASFNYG
SFSSWLGSVLNNGGAILENCQGAIQNAIAVQLKSGVGSVGAISNHLIEVNLLKESPLSAVVFLEFLGSSYSLEKLKAFEA
KFKELKDLEDKKLKAALAVHAPYSVQKDMALSVIQLAKDSQSLLSTHFLESLEELEWVENSKGWFENFYQHFLKESHFKS
LYKGANDYIDMFEDTHTLFVHNQFASLEALKRIKSQVKNAFLITCPFSNRLLSGKALDLERVREAGLSVSVATDGLSSNV
SLSLLDELRAFLLTHNMPLLELAKIALLGATRHGAKALALNNGEIEANKRADLSVFGFNEKFTKEQAILQFLLHAKEVER
LFLGGKRVI

Sequences:

>Translated_409_residues
MQEIIGASLVFLCNEKCEVLEDYGVVFDEKIVEIGDYQSLTLKYPHLKAQFFENSVLLPAFINAHTHFEFSNNKASFNYG
SFSSWLGSVLNNGGAILENCQGAIQNAIAVQLKSGVGSVGAISNHLIEVNLLKESPLSAVVFLEFLGSSYSLEKLKAFEA
KFKELKDLEDKKLKAALAVHAPYSVQKDMALSVIQLAKDSQSLLSTHFLESLEELEWVENSKGWFENFYQHFLKESHFKS
LYKGANDYIDMFEDTHTLFVHNQFASLEALKRIKSQVKNAFLITCPFSNRLLSGKALDLERVREAGLSVSVATDGLSSNV
SLSLLDELRAFLLTHNMPLLELAKIALLGATRHGAKALALNNGEIEANKRADLSVFGFNEKFTKEQAILQFLLHAKEVER
LFLGGKRVI
>Mature_409_residues
MQEIIGASLVFLCNEKCEVLEDYGVVFDEKIVEIGDYQSLTLKYPHLKAQFFENSVLLPAFINAHTHFEFSNNKASFNYG
SFSSWLGSVLNNGGAILENCQGAIQNAIAVQLKSGVGSVGAISNHLIEVNLLKESPLSAVVFLEFLGSSYSLEKLKAFEA
KFKELKDLEDKKLKAALAVHAPYSVQKDMALSVIQLAKDSQSLLSTHFLESLEELEWVENSKGWFENFYQHFLKESHFKS
LYKGANDYIDMFEDTHTLFVHNQFASLEALKRIKSQVKNAFLITCPFSNRLLSGKALDLERVREAGLSVSVATDGLSSNV
SLSLLDELRAFLLTHNMPLLELAKIALLGATRHGAKALALNNGEIEANKRADLSVFGFNEKFTKEQAILQFLLHAKEVER
LFLGGKRVI

Specific function: Catalyzes the deamination of 5-methylthioadenosine and S-adenosyl-L-homocysteine into 5-methylthioinosine and S-inosyl-L- homocysteine, respectively. Is also able to deaminate adenosine [H]

COG id: COG0402

COG function: function code FR; Cytosine deaminase and related metal-dependent hydrolases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the MTA/SAH deaminase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006680
- InterPro:   IPR011059 [H]

Pfam domain/function: PF01979 Amidohydro_1 [H]

EC number: =3.5.4.28 [H]

Molecular weight: Translated: 45592; Mature: 45592

Theoretical pI: Translated: 6.33; Mature: 6.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQEIIGASLVFLCNEKCEVLEDYGVVFDEKIVEIGDYQSLTLKYPHLKAQFFENSVLLPA
CCCHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHCCCCCEEEEECCCHHHHHHCCCEEEHH
FINAHTHFEFSNNKASFNYGSFSSWLGSVLNNGGAILENCQGAIQNAIAVQLKSGVGSVG
HHCCEEEEEECCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHEEECCCCCCCH
AISNHLIEVNLLKESPLSAVVFLEFLGSSYSLEKLKAFEAKFKELKDLEDKKLKAALAVH
HHHCCEEEEEEECCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHEEE
APYSVQKDMALSVIQLAKDSQSLLSTHFLESLEELEWVENSKGWFENFYQHFLKESHFKS
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
LYKGANDYIDMFEDTHTLFVHNQFASLEALKRIKSQVKNAFLITCPFSNRLLSGKALDLE
HHCCCHHHHHHHCCCEEEEEECHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCHH
RVREAGLSVSVATDGLSSNVSLSLLDELRAFLLTHNMPLLELAKIALLGATRHGAKALAL
HHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCEEEEE
NNGEIEANKRADLSVFGFNEKFTKEQAILQFLLHAKEVERLFLGGKRVI
CCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MQEIIGASLVFLCNEKCEVLEDYGVVFDEKIVEIGDYQSLTLKYPHLKAQFFENSVLLPA
CCCHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHCCCCCEEEEECCCHHHHHHCCCEEEHH
FINAHTHFEFSNNKASFNYGSFSSWLGSVLNNGGAILENCQGAIQNAIAVQLKSGVGSVG
HHCCEEEEEECCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHEEECCCCCCCH
AISNHLIEVNLLKESPLSAVVFLEFLGSSYSLEKLKAFEAKFKELKDLEDKKLKAALAVH
HHHCCEEEEEEECCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHEEE
APYSVQKDMALSVIQLAKDSQSLLSTHFLESLEELEWVENSKGWFENFYQHFLKESHFKS
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
LYKGANDYIDMFEDTHTLFVHNQFASLEALKRIKSQVKNAFLITCPFSNRLLSGKALDLE
HHCCCHHHHHHHCCCEEEEEECHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCHH
RVREAGLSVSVATDGLSSNVSLSLLDELRAFLLTHNMPLLELAKIALLGATRHGAKALAL
HHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCEEEEE
NNGEIEANKRADLSVFGFNEKFTKEQAILQFLLHAKEVERLFLGGKRVI
CCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA