Definition Helicobacter pylori HPAG1 chromosome, complete genome.
Accession NC_008086
Length 1,596,366

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The map label for this gene is 108562628

Identifier: 108562628

GI number: 108562628

Start: 207844

End: 208038

Strand: Reverse

Name: 108562628

Synonym: HPAG1_0203

Alternate gene names: NA

Gene position: 208038-207844 (Counterclockwise)

Preceding gene: 108562629

Following gene: 108562627

Centisome position: 13.03

GC content: 36.92

Gene sequence:

>195_bases
TTGCCTGAATTGCCACGACTCACAGCTAAAGAAGCAGAGAAGCTATTATTGCAGAATGGATTTGTTTTCTCTAGGCAAAA
AGGCAGCCATAGAATTTATGTGAAAGATAAAATCAGGCAGGTTTTGCCTTTTCATTCTGGCGAAATCTTGCACCCTAAAA
TAGTGAAAGAAATCATGGAAAATATCCTTAAATGA

Upstream 100 bases:

>100_bases
ATTAAAGAAGCCATAGAGCTTTATTTGGGAGATTTAGAAGCTGATGAGTTAGCTTTTCTTTCTAAGAAAAATTCTGTAAT
AGCACCCATTGAGATAGCTT

Downstream 100 bases:

>100_bases
AATCTAAAGAAGTCTTAAAGATCTTAAAAATATCCCGTGTTACTCTTTGGAAGTATGTTAAAAGTGGAAAGATACGAGTT
AAACAAGAACCCAATGGTTA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 64; Mature: 63

Protein sequence:

>64_residues
MPELPRLTAKEAEKLLLQNGFVFSRQKGSHRIYVKDKIRQVLPFHSGEILHPKIVKEIMENILK

Sequences:

>Translated_64_residues
MPELPRLTAKEAEKLLLQNGFVFSRQKGSHRIYVKDKIRQVLPFHSGEILHPKIVKEIMENILK
>Mature_63_residues
PELPRLTAKEAEKLLLQNGFVFSRQKGSHRIYVKDKIRQVLPFHSGEILHPKIVKEIMENILK

Specific function: Unknown

COG id: COG1724

COG function: function code N; Predicted periplasmic or secreted lipoprotein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7494; Mature: 7363

Theoretical pI: Translated: 10.62; Mature: 10.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPELPRLTAKEAEKLLLQNGFVFSRQKGSHRIYVKDKIRQVLPFHSGEILHPKIVKEIME
CCCCCCCCHHHHHHHHHHCCCEEECCCCCCEEEEHHHHHHHCCCCCCCCCCHHHHHHHHH
NILK
HHCC
>Mature Secondary Structure 
PELPRLTAKEAEKLLLQNGFVFSRQKGSHRIYVKDKIRQVLPFHSGEILHPKIVKEIME
CCCCCCCHHHHHHHHHHCCCEEECCCCCCEEEEHHHHHHHCCCCCCCCCCHHHHHHHHH
NILK
HHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA