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The map label for this gene is 108562629

Identifier: 108562629

GI number: 108562629

Start: 208031

End: 208249

Strand: Reverse

Name: 108562629

Synonym: HPAG1_0204

Alternate gene names: NA

Gene position: 208249-208031 (Counterclockwise)

Preceding gene: 108562630

Following gene: 108562628

Centisome position: 13.05

GC content: 35.16

Gene sequence:

>219_bases
ATGCTTATAAACGCTGTCATAGAAAAAGATGAGAATGGGTATTTTGCTTTTGTCCCCTTTCTAAAAGGCTGTGTATCACA
AGGGAAAAGTTATGAAGAAGCTCTAAGAAACATTAAAGAAGCCATAGAGCTTTATTTGGGAGATTTAGAAGCTGATGAGT
TAGCTTTTCTTTCTAAGAAAAATTCTGTAATAGCACCCATTGAGATAGCTTTTGCCTGA

Upstream 100 bases:

>100_bases
GGGAACACAAGCAAAATCAGTTATTATTAAACTTTCAATTTAATTTTGTTTAAAATATATTACGTGTATAATCATAAGAA
ATCTAATCAAAGGTAGTGCC

Downstream 100 bases:

>100_bases
ATTGCCACGACTCACAGCTAAAGAAGCAGAGAAGCTATTATTGCAGAATGGATTTGTTTTCTCTAGGCAAAAAGGCAGCC
ATAGAATTTATGTGAAAGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 72; Mature: 72

Protein sequence:

>72_residues
MLINAVIEKDENGYFAFVPFLKGCVSQGKSYEEALRNIKEAIELYLGDLEADELAFLSKKNSVIAPIEIAFA

Sequences:

>Translated_72_residues
MLINAVIEKDENGYFAFVPFLKGCVSQGKSYEEALRNIKEAIELYLGDLEADELAFLSKKNSVIAPIEIAFA
>Mature_72_residues
MLINAVIEKDENGYFAFVPFLKGCVSQGKSYEEALRNIKEAIELYLGDLEADELAFLSKKNSVIAPIEIAFA

Specific function: Unknown

COG id: COG1598

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0150 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y960_HELPJ (Q9ZKH6)

Other databases:

- EMBL:   AE001439
- PIR:   A71867
- RefSeq:   NP_223677.1
- ProteinModelPortal:   Q9ZKH6
- SMR:   Q9ZKH6
- STRING:   Q9ZKH6
- GeneID:   889321
- GenomeReviews:   AE001439_GR
- KEGG:   hpj:jhp0960
- NMPDR:   fig|85963.1.peg.955
- eggNOG:   COG1598
- HOGENOM:   HBG731174
- OMA:   SIEVNVA
- ProtClustDB:   CLSK694778
- BioCyc:   HPYL85963:JHP0960-MONOMER
- InterPro:   IPR005357

Pfam domain/function: PF03681 UPF0150

EC number: NA

Molecular weight: Translated: 7999; Mature: 7999

Theoretical pI: Translated: 4.23; Mature: 4.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLINAVIEKDENGYFAFVPFLKGCVSQGKSYEEALRNIKEAIELYLGDLEADELAFLSKK
CCCCCEEECCCCCEEEEHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHCC
NSVIAPIEIAFA
CCEECCEEEEEC
>Mature Secondary Structure
MLINAVIEKDENGYFAFVPFLKGCVSQGKSYEEALRNIKEAIELYLGDLEADELAFLSKK
CCCCCEEECCCCCEEEEHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHCC
NSVIAPIEIAFA
CCEECCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9923682