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The map label for this gene is ribH [H]

Identifier: 108562427

GI number: 108562427

Start: 1947

End: 2417

Strand: Reverse

Name: ribH [H]

Synonym: HPAG1_0002

Alternate gene names: 108562427

Gene position: 2417-1947 (Counterclockwise)

Preceding gene: 108562428

Following gene: 108562426

Centisome position: 0.15

GC content: 46.5

Gene sequence:

>471_bases
ATGCAAATCATAGAAGGGAAATTGCAATTGCAAGGGAATGAAAGAGTCGCTATTTTAACATCGCGCTTCAACCATATCAT
CACAGACAGATTAAAAGAAGGGGCGATGGACTGCTTTAAGAGGCATGGGGGCGATGAGGATCTTTTAGACATCGTGTTGG
TGCCTGGGGCTTATGAACTGCCTTTGATTTTAGACAAATTGTTAGAGAGCGGAAAATACGATGGCGTGTGCGTTTTAGGA
GCGATCATTAGAGGGGGGACTCCACATTTTGACTATGTGAGCGCGGAAGCGACTAAGGGCATTGCCAGCGCGATGCTCAA
ATACAGCATGCCGGTAAGCTTTGGCGTGCTGACCACAGACAATATTGAACAAGCGATTGAAAGAGCGGGCAGTAAAGCCG
GCAATAAGGGCTTTGAAGCGATGAGCACCCTCATTGAATTATTGAGCTTGTGCCAAACTCTCAAGGGTTAA

Upstream 100 bases:

>100_bases
AAACGCTCTAAGCGATGGGGCGAACATGCTAAAACCTGATGAGCTAGAACGCTTAGTAACCGACATGTTAAAAATCCAAA
ATTTATTTTAAAGGAATTTC

Downstream 100 bases:

>100_bases
AATGGCGACACGAACTCAAGCCAGGGGGGCTGTGGTTGAATTGTTGTATGCGTTTGAGAGCGGTAATGAAGAAATTAAAA
AAATCGCTTCCAGCATGCTA

Product: 6,7-dimethyl-8-ribityllumazine synthase

Products: NA

Alternate protein names: DMRL synthase; Lumazine synthase; Riboflavin synthase beta chain [H]

Number of amino acids: Translated: 156; Mature: 156

Protein sequence:

>156_residues
MQIIEGKLQLQGNERVAILTSRFNHIITDRLKEGAMDCFKRHGGDEDLLDIVLVPGAYELPLILDKLLESGKYDGVCVLG
AIIRGGTPHFDYVSAEATKGIASAMLKYSMPVSFGVLTTDNIEQAIERAGSKAGNKGFEAMSTLIELLSLCQTLKG

Sequences:

>Translated_156_residues
MQIIEGKLQLQGNERVAILTSRFNHIITDRLKEGAMDCFKRHGGDEDLLDIVLVPGAYELPLILDKLLESGKYDGVCVLG
AIIRGGTPHFDYVSAEATKGIASAMLKYSMPVSFGVLTTDNIEQAIERAGSKAGNKGFEAMSTLIELLSLCQTLKG
>Mature_156_residues
MQIIEGKLQLQGNERVAILTSRFNHIITDRLKEGAMDCFKRHGGDEDLLDIVLVPGAYELPLILDKLLESGKYDGVCVLG
AIIRGGTPHFDYVSAEATKGIASAMLKYSMPVSFGVLTTDNIEQAIERAGSKAGNKGFEAMSTLIELLSLCQTLKG

Specific function: Riboflavin synthase is a bifunctional enzyme complex catalyzing the formation of riboflavin from 5-amino-6-(1'-D)- ribityl-amino-2,4(1H,3H)-pyrimidinedione and L-3,4-dihydrohy-2- butanone-4-phosphate via 6,7-dimethyl-8-lumazine. The beta subunit catalyzes

COG id: COG0054

COG function: function code H; Riboflavin synthase beta-chain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DMRL synthase family [H]

Homologues:

Organism=Escherichia coli, GI1786617, Length=157, Percent_Identity=51.5923566878981, Blast_Score=157, Evalue=3e-40,
Organism=Saccharomyces cerevisiae, GI6324429, Length=121, Percent_Identity=39.6694214876033, Blast_Score=83, Evalue=2e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002180 [H]

Pfam domain/function: PF00885 DMRL_synthase [H]

EC number: =2.5.1.9 [H]

Molecular weight: Translated: 16887; Mature: 16887

Theoretical pI: Translated: 5.24; Mature: 5.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQIIEGKLQLQGNERVAILTSRFNHIITDRLKEGAMDCFKRHGGDEDLLDIVLVPGAYEL
CCCCCCEEEECCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCH
PLILDKLLESGKYDGVCVLGAIIRGGTPHFDYVSAEATKGIASAMLKYSMPVSFGVLTTD
HHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCEECEEECC
NIEQAIERAGSKAGNKGFEAMSTLIELLSLCQTLKG
HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MQIIEGKLQLQGNERVAILTSRFNHIITDRLKEGAMDCFKRHGGDEDLLDIVLVPGAYEL
CCCCCCEEEECCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCH
PLILDKLLESGKYDGVCVLGAIIRGGTPHFDYVSAEATKGIASAMLKYSMPVSFGVLTTD
HHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCEECEEECC
NIEQAIERAGSKAGNKGFEAMSTLIELLSLCQTLKG
HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA