Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is yecP [C]

Identifier: 103488653

GI number: 103488653

Start: 3336795

End: 3337514

Strand: Direct

Name: yecP [C]

Synonym: Sala_3178

Alternate gene names: 103488653

Gene position: 3336795-3337514 (Clockwise)

Preceding gene: 103488652

Following gene: 103488662

Centisome position: 99.75

GC content: 68.75

Gene sequence:

>720_bases
ATGGTGCGCGGCGCCCTCGCTGCGCTGGCGCTGCTGGCGCTGCTCGGTGGCTGCGACGGCCCGTGGAGCGAGGATCGCAG
CCGCATCGAAACCGCGCGCGACTTTCCGCCCGCCGACCGCCCGGTCGCGCCGACCGTCTCGACAAAATGGTCGACCGAAG
AGGCGCGAGACCGCGTCAACGAGGCCGAGGACGTCATGGACTCGGCCGACGTCCGCCCCGGCATGACCGTCGCCGACATC
GGCGCCGGCGACGGCTATTATACCGTCCGCCTTGCGCAGCGCGTCGGCCCTGGCGGGCGCGTGCTTGCCCAGGATATCAT
TCCCGAGGTGATCGAACGGCTCGCCGACCGTGTCGCGCGCGAACGGCTCGACAATGTCTCCTTGAAGCTGGGCGCGGTCG
ACGATCCGCGCCTGCCCGCCGCCAGCTTCGACCGTGTGTTCATGGTGCATATGTATCACGAGATCGGCGAACCCTATGCC
TTCCTCTGGCGGTTGCGCCCCGCGCTGCGAGAGGGCGGGCAGGTGATCGTCGTCGACGGCGACCGTCCGATCGCCCAGCA
TGGCACGCCCTTCCGCCTGCTCGTCTGCGAGTTCGAGGCGGTGGGCTACAAGCTCGTCTCCTATGACGACAAACAGCACG
CGGGCGGCTATCTCGCGCGCTTCGTCCCCGAAGGCGACCGTCCCGCGCCCGATGCGATCAAGGTCTGCGACAATCCTTAG

Upstream 100 bases:

>100_bases
CGCCGGGCGACGTTCTCGATGGCGCCCTCGATCCCTTCATGGCGGCGGCGCTGTCGCAGAAGGTGACGGGCGAAAAGGTC
GAGGTGGAGGACATCGACTG

Downstream 100 bases:

>100_bases
AAAGAAGCCGTCGCCCCCGCGAAGGCGGGGGTCGCTGGCGGCATGGCGCACGGTTGATGGCGGCCTCCGCCTTCGCGGGG
GCGACGAGAACTGGTCAATA

Product: methyltransferase type 11

Products: NA

Alternate protein names: SAM-Dependent Methyltransferase; Methyltransferase; Methyltransferase Family Protein; Methyltransferase UbiE/COQ5 Family; Ubiquinone/Menaquinone Biosynthesis Methyltransferase; Generic Methyltransferase; Methyltransferase Domain Family; Methyltransferase Domain Family Protein; Methylase

Number of amino acids: Translated: 239; Mature: 239

Protein sequence:

>239_residues
MVRGALAALALLALLGGCDGPWSEDRSRIETARDFPPADRPVAPTVSTKWSTEEARDRVNEAEDVMDSADVRPGMTVADI
GAGDGYYTVRLAQRVGPGGRVLAQDIIPEVIERLADRVARERLDNVSLKLGAVDDPRLPAASFDRVFMVHMYHEIGEPYA
FLWRLRPALREGGQVIVVDGDRPIAQHGTPFRLLVCEFEAVGYKLVSYDDKQHAGGYLARFVPEGDRPAPDAIKVCDNP

Sequences:

>Translated_239_residues
MVRGALAALALLALLGGCDGPWSEDRSRIETARDFPPADRPVAPTVSTKWSTEEARDRVNEAEDVMDSADVRPGMTVADI
GAGDGYYTVRLAQRVGPGGRVLAQDIIPEVIERLADRVARERLDNVSLKLGAVDDPRLPAASFDRVFMVHMYHEIGEPYA
FLWRLRPALREGGQVIVVDGDRPIAQHGTPFRLLVCEFEAVGYKLVSYDDKQHAGGYLARFVPEGDRPAPDAIKVCDNP
>Mature_239_residues
MVRGALAALALLALLGGCDGPWSEDRSRIETARDFPPADRPVAPTVSTKWSTEEARDRVNEAEDVMDSADVRPGMTVADI
GAGDGYYTVRLAQRVGPGGRVLAQDIIPEVIERLADRVARERLDNVSLKLGAVDDPRLPAASFDRVFMVHMYHEIGEPYA
FLWRLRPALREGGQVIVVDGDRPIAQHGTPFRLLVCEFEAVGYKLVSYDDKQHAGGYLARFVPEGDRPAPDAIKVCDNP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26221; Mature: 26221

Theoretical pI: Translated: 4.80; Mature: 4.80

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVRGALAALALLALLGGCDGPWSEDRSRIETARDFPPADRPVAPTVSTKWSTEEARDRVN
CCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHH
EAEDVMDSADVRPGMTVADIGAGDGYYTVRLAQRVGPGGRVLAQDIIPEVIERLADRVAR
HHHHHHHHCCCCCCCEEEECCCCCCEEEEEEEHHCCCCCHHHHHHHHHHHHHHHHHHHHH
ERLDNVSLKLGAVDDPRLPAASFDRVFMVHMYHEIGEPYAFLWRLRPALREGGQVIVVDG
HHHHCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCEEEEEEC
DRPIAQHGTPFRLLVCEFEAVGYKLVSYDDKQHAGGYLARFVPEGDRPAPDAIKVCDNP
CCCHHHCCCCEEEEEEEHHHHCEEEEECCCCHHCCCEEEEECCCCCCCCCCHHHCCCCC
>Mature Secondary Structure
MVRGALAALALLALLGGCDGPWSEDRSRIETARDFPPADRPVAPTVSTKWSTEEARDRVN
CCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHH
EAEDVMDSADVRPGMTVADIGAGDGYYTVRLAQRVGPGGRVLAQDIIPEVIERLADRVAR
HHHHHHHHCCCCCCCEEEECCCCCCEEEEEEEHHCCCCCHHHHHHHHHHHHHHHHHHHHH
ERLDNVSLKLGAVDDPRLPAASFDRVFMVHMYHEIGEPYAFLWRLRPALREGGQVIVVDG
HHHHCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCEEEEEEC
DRPIAQHGTPFRLLVCEFEAVGYKLVSYDDKQHAGGYLARFVPEGDRPAPDAIKVCDNP
CCCHHHCCCCEEEEEEEHHHHCEEEEECCCCHHCCCEEEEECCCCCCCCCCHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA