| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is yecP [C]
Identifier: 103488653
GI number: 103488653
Start: 3336795
End: 3337514
Strand: Direct
Name: yecP [C]
Synonym: Sala_3178
Alternate gene names: 103488653
Gene position: 3336795-3337514 (Clockwise)
Preceding gene: 103488652
Following gene: 103488662
Centisome position: 99.75
GC content: 68.75
Gene sequence:
>720_bases ATGGTGCGCGGCGCCCTCGCTGCGCTGGCGCTGCTGGCGCTGCTCGGTGGCTGCGACGGCCCGTGGAGCGAGGATCGCAG CCGCATCGAAACCGCGCGCGACTTTCCGCCCGCCGACCGCCCGGTCGCGCCGACCGTCTCGACAAAATGGTCGACCGAAG AGGCGCGAGACCGCGTCAACGAGGCCGAGGACGTCATGGACTCGGCCGACGTCCGCCCCGGCATGACCGTCGCCGACATC GGCGCCGGCGACGGCTATTATACCGTCCGCCTTGCGCAGCGCGTCGGCCCTGGCGGGCGCGTGCTTGCCCAGGATATCAT TCCCGAGGTGATCGAACGGCTCGCCGACCGTGTCGCGCGCGAACGGCTCGACAATGTCTCCTTGAAGCTGGGCGCGGTCG ACGATCCGCGCCTGCCCGCCGCCAGCTTCGACCGTGTGTTCATGGTGCATATGTATCACGAGATCGGCGAACCCTATGCC TTCCTCTGGCGGTTGCGCCCCGCGCTGCGAGAGGGCGGGCAGGTGATCGTCGTCGACGGCGACCGTCCGATCGCCCAGCA TGGCACGCCCTTCCGCCTGCTCGTCTGCGAGTTCGAGGCGGTGGGCTACAAGCTCGTCTCCTATGACGACAAACAGCACG CGGGCGGCTATCTCGCGCGCTTCGTCCCCGAAGGCGACCGTCCCGCGCCCGATGCGATCAAGGTCTGCGACAATCCTTAG
Upstream 100 bases:
>100_bases CGCCGGGCGACGTTCTCGATGGCGCCCTCGATCCCTTCATGGCGGCGGCGCTGTCGCAGAAGGTGACGGGCGAAAAGGTC GAGGTGGAGGACATCGACTG
Downstream 100 bases:
>100_bases AAAGAAGCCGTCGCCCCCGCGAAGGCGGGGGTCGCTGGCGGCATGGCGCACGGTTGATGGCGGCCTCCGCCTTCGCGGGG GCGACGAGAACTGGTCAATA
Product: methyltransferase type 11
Products: NA
Alternate protein names: SAM-Dependent Methyltransferase; Methyltransferase; Methyltransferase Family Protein; Methyltransferase UbiE/COQ5 Family; Ubiquinone/Menaquinone Biosynthesis Methyltransferase; Generic Methyltransferase; Methyltransferase Domain Family; Methyltransferase Domain Family Protein; Methylase
Number of amino acids: Translated: 239; Mature: 239
Protein sequence:
>239_residues MVRGALAALALLALLGGCDGPWSEDRSRIETARDFPPADRPVAPTVSTKWSTEEARDRVNEAEDVMDSADVRPGMTVADI GAGDGYYTVRLAQRVGPGGRVLAQDIIPEVIERLADRVARERLDNVSLKLGAVDDPRLPAASFDRVFMVHMYHEIGEPYA FLWRLRPALREGGQVIVVDGDRPIAQHGTPFRLLVCEFEAVGYKLVSYDDKQHAGGYLARFVPEGDRPAPDAIKVCDNP
Sequences:
>Translated_239_residues MVRGALAALALLALLGGCDGPWSEDRSRIETARDFPPADRPVAPTVSTKWSTEEARDRVNEAEDVMDSADVRPGMTVADI GAGDGYYTVRLAQRVGPGGRVLAQDIIPEVIERLADRVARERLDNVSLKLGAVDDPRLPAASFDRVFMVHMYHEIGEPYA FLWRLRPALREGGQVIVVDGDRPIAQHGTPFRLLVCEFEAVGYKLVSYDDKQHAGGYLARFVPEGDRPAPDAIKVCDNP >Mature_239_residues MVRGALAALALLALLGGCDGPWSEDRSRIETARDFPPADRPVAPTVSTKWSTEEARDRVNEAEDVMDSADVRPGMTVADI GAGDGYYTVRLAQRVGPGGRVLAQDIIPEVIERLADRVARERLDNVSLKLGAVDDPRLPAASFDRVFMVHMYHEIGEPYA FLWRLRPALREGGQVIVVDGDRPIAQHGTPFRLLVCEFEAVGYKLVSYDDKQHAGGYLARFVPEGDRPAPDAIKVCDNP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26221; Mature: 26221
Theoretical pI: Translated: 4.80; Mature: 4.80
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVRGALAALALLALLGGCDGPWSEDRSRIETARDFPPADRPVAPTVSTKWSTEEARDRVN CCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHH EAEDVMDSADVRPGMTVADIGAGDGYYTVRLAQRVGPGGRVLAQDIIPEVIERLADRVAR HHHHHHHHCCCCCCCEEEECCCCCCEEEEEEEHHCCCCCHHHHHHHHHHHHHHHHHHHHH ERLDNVSLKLGAVDDPRLPAASFDRVFMVHMYHEIGEPYAFLWRLRPALREGGQVIVVDG HHHHCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCEEEEEEC DRPIAQHGTPFRLLVCEFEAVGYKLVSYDDKQHAGGYLARFVPEGDRPAPDAIKVCDNP CCCHHHCCCCEEEEEEEHHHHCEEEEECCCCHHCCCEEEEECCCCCCCCCCHHHCCCCC >Mature Secondary Structure MVRGALAALALLALLGGCDGPWSEDRSRIETARDFPPADRPVAPTVSTKWSTEEARDRVN CCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHH EAEDVMDSADVRPGMTVADIGAGDGYYTVRLAQRVGPGGRVLAQDIIPEVIERLADRVAR HHHHHHHHCCCCCCCEEEECCCCCCEEEEEEEHHCCCCCHHHHHHHHHHHHHHHHHHHHH ERLDNVSLKLGAVDDPRLPAASFDRVFMVHMYHEIGEPYAFLWRLRPALREGGQVIVVDG HHHHCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCEEEEEEC DRPIAQHGTPFRLLVCEFEAVGYKLVSYDDKQHAGGYLARFVPEGDRPAPDAIKVCDNP CCCHHHCCCCEEEEEEEHHHHCEEEEECCCCHHCCCEEEEECCCCCCCCCCHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA