| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is 103488628
Identifier: 103488628
GI number: 103488628
Start: 3302688
End: 3303056
Strand: Direct
Name: 103488628
Synonym: Sala_3153
Alternate gene names: NA
Gene position: 3302688-3303056 (Clockwise)
Preceding gene: 103488627
Following gene: 103488630
Centisome position: 98.73
GC content: 71.0
Gene sequence:
>369_bases ATGATGGGTCGGATCATTGGCGGTATGGTGGGCCGGGCGATCGGCCGCAAGCGTGGCAACCACCCCATCGCCGGGACGAT CATCGGCGCGGGAACGCTGATGGCCGCGCGCCGCCTGTTCCCGCAGCGTTACGCCCTGCTCGCGGCGACCGTCGCGGGCG CCTATCTCACCAGGAAATGGGCCGAACGCGCCGAGGCGCGCCGCGCGGCCGAAGCGGCGCACGCGGCCGACCCGGAACTG GTCGAAGCGGGCGTCGTCGACAGCTATGCCGGGACCATCGAGGCGCCAACCGATGGGCAGGCGATCGGCGACGCGTTGCC GCCCGCGATTCCGCTCGATGCTGATGGAAAGCGCCCGGCTATCCACTGA
Upstream 100 bases:
>100_bases CGATGCCGCGACCTTCGACCGCCTCGTCGATCCGCGCACGATGCTGGGGCCGGAACCCGGACCGCCTTCGGCGAATTGAT GGGGTGAAGGAGAAACGAGG
Downstream 100 bases:
>100_bases AAGTCGTCAAAAGCCTTCGACTGGCTTTTCTTCGGTCATCCCGGCCTTCGCCGGAATCAGCTTTCAAGGGATGGGGCGTT CAACCCCCCGCCTGCCAATC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 122; Mature: 122
Protein sequence:
>122_residues MMGRIIGGMVGRAIGRKRGNHPIAGTIIGAGTLMAARRLFPQRYALLAATVAGAYLTRKWAERAEARRAAEAAHAADPEL VEAGVVDSYAGTIEAPTDGQAIGDALPPAIPLDADGKRPAIH
Sequences:
>Translated_122_residues MMGRIIGGMVGRAIGRKRGNHPIAGTIIGAGTLMAARRLFPQRYALLAATVAGAYLTRKWAERAEARRAAEAAHAADPEL VEAGVVDSYAGTIEAPTDGQAIGDALPPAIPLDADGKRPAIH >Mature_122_residues MMGRIIGGMVGRAIGRKRGNHPIAGTIIGAGTLMAARRLFPQRYALLAATVAGAYLTRKWAERAEARRAAEAAHAADPEL VEAGVVDSYAGTIEAPTDGQAIGDALPPAIPLDADGKRPAIH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12650; Mature: 12650
Theoretical pI: Translated: 10.09; Mature: 10.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMGRIIGGMVGRAIGRKRGNHPIAGTIIGAGTLMAARRLFPQRYALLAATVAGAYLTRKW CCCHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AERAEARRAAEAAHAADPELVEAGVVDSYAGTIEAPTDGQAIGDALPPAIPLDADGKRPA HHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCC IH CC >Mature Secondary Structure MMGRIIGGMVGRAIGRKRGNHPIAGTIIGAGTLMAARRLFPQRYALLAATVAGAYLTRKW CCCHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AERAEARRAAEAAHAADPELVEAGVVDSYAGTIEAPTDGQAIGDALPPAIPLDADGKRPA HHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCC IH CC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA