| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is lnt [H]
Identifier: 103488613
GI number: 103488613
Start: 3289366
End: 3291087
Strand: Direct
Name: lnt [H]
Synonym: Sala_3138
Alternate gene names: 103488613
Gene position: 3289366-3291087 (Clockwise)
Preceding gene: 103488612
Following gene: 103488614
Centisome position: 98.33
GC content: 67.89
Gene sequence:
>1722_bases GTGACCGCGACACGCTCCCGCATCGCCGCTTTGGCCGACCGCTGGCCAAAGTCCCTCGCCCTGTTGCTCGGCGCCGTTTC GGCGACGGGCTTCGCGCCGCTGCACCTCTGGCCGCTGACCTTGCTCGCGCTCGGCGGCTGGATGGCGATCGTCGCGCGCA GCCCGCGCGGCTGGCGCGCCTTCGGGACCGGCTGGGCGTTCGGCGTCGGTCATTTCGTCGTCGGCCTCAACTGGATCGCG ACCGCCTTTACCTATCAGGCGGCGATGCCCGCCTGGCTGGGGTGGATCGCGGTTCTGCTGCTCGCGCTGTATCTCGCGGT GTATCCGGCGCTGGCGGCGTGGGGGGCGTGGCTGACGCAAAAAATCGTCGCCCCCGCGCAGGGTGGCGGGAGACGCGTGA CTCCCGCCACGGCCGCTGGCGGTTTATCCGGCGACGATGGCGCAAGGCCGACGGCGGCCCCCGCCTTCGCGGGGGCGACG CTGTCCTTCGTCCTCGCCTTTGCCGCGCTGTGGACGCTCACCGAATGGCTGCGCAGCTGGGTGTTTACAGGTTTCGCGTG GAATCCGCTTGTCGCAACAACCGGCGACTTTTTGGGCCTGCTGCGATTGATCGGCTCCTATGGTGCGTCGGCCACCGTGA TATTGGCGGCGGGTTATGTGCTGTGGGTGGTCGGATCGGGTGTGGAACGCATCCGAAGAAAAGATTCGCTCCCGGAACCG AGTCCTCAATCCCAGCTTCAACAACAATTGGCTGCTGGTGCTGTCATCGCCGGCTTTCTGGCTTTGGTCTATCTGCTGCC AGACCATTCGTCCTCACCACCGGCAGCGGCGGATGCCACCCCCATCACCGTCGTCCAGCCCAATATCGGCCAGCAGGACA AATGGGAGGGGAGCAAGGCCGACGCCAATTTCGCCAAGCTCGCGCGGCTGACGACGCCGATGGACGACACGCCGCGGCTG ATCCTGTGGCCCGAGGCGGCGGTGCCCGACTATCTCGAATGGGGCTATCCCGCCATCTATTACGAGCGCTCGCCCGCCGA GGCGCGGCGGCGGATCACCGACCTGATGAACGCGGGCGACGTGATGCTGCTCGGCGCGCTCAAGCTCGAAATGGACGAGG GGGGCGAGGTCGTCGGCGCGCGCAACGCGGTGATGACGCTTCACGCCGATGGCACGCTGGGGCCGCGCTATGACAAGGCG CATCTCGTTCCCTATGGCGAATATCTGCCGATGCGACCCGTCCTCTCGGCGATCGGACTGTCGCGGCTTGCGCCCGGCGA CATCGATTTCTGGCCCGGCCCGGGACCGCGCACGATCGACCTCGGCGCCTTCGGCCGCATCGGCCTGCAAATCTGTTACG AGATCATCTTTTCGGGGCAGGTCGTCGACCGTGACCATCGCCCCGCCTTCATCTTCAATCCGTCGAACGACGCCTGGTTC GGATCGTGGGGGCCGCCGCAGCATCTGGCGCAGGCCCGCCTGCGCGCGATCGAGGAGGGGCTGCCCGTCGTCCGCGCGAC GCCGACGGGGATCAGCGCGGTGATCGATGCCGACGGCCGCATCGTGCAATCGCTGCCGATGCACGCCGCGGGGCGTATCG ACACGATCGTGCCGCCCGCGCACGAACCGACGCTTTTCGCGCGCTTCGGCAACGCGCTGCCGGTCGGATTCGCGCTCGCG CTGCTCGCGCTGGCCATTGCCTTTCGGCGGCGCGGACGCTAA
Upstream 100 bases:
>100_bases CAAATCGGCCAGTTTTGCGGTCGCGGGCGACATGCACCAGTCGATCAGGATGAAATATATGCTCTAGTGGCGCCCGCGCG CCGCCGCTAAGAGAGCGCGC
Downstream 100 bases:
>100_bases CAGCCACCCAACATAAAGCTTCCTTTATATCCCCTCGCAAAGGCCCCCCATGCGCAACAGCTTCCTCTTCACCTCCGAAA GCGTGTCCGAAGGACATCCC
Product: apolipoprotein N-acyltransferase
Products: NA
Alternate protein names: ALP N-acyltransferase [H]
Number of amino acids: Translated: 573; Mature: 572
Protein sequence:
>573_residues MTATRSRIAALADRWPKSLALLLGAVSATGFAPLHLWPLTLLALGGWMAIVARSPRGWRAFGTGWAFGVGHFVVGLNWIA TAFTYQAAMPAWLGWIAVLLLALYLAVYPALAAWGAWLTQKIVAPAQGGGRRVTPATAAGGLSGDDGARPTAAPAFAGAT LSFVLAFAALWTLTEWLRSWVFTGFAWNPLVATTGDFLGLLRLIGSYGASATVILAAGYVLWVVGSGVERIRRKDSLPEP SPQSQLQQQLAAGAVIAGFLALVYLLPDHSSSPPAAADATPITVVQPNIGQQDKWEGSKADANFAKLARLTTPMDDTPRL ILWPEAAVPDYLEWGYPAIYYERSPAEARRRITDLMNAGDVMLLGALKLEMDEGGEVVGARNAVMTLHADGTLGPRYDKA HLVPYGEYLPMRPVLSAIGLSRLAPGDIDFWPGPGPRTIDLGAFGRIGLQICYEIIFSGQVVDRDHRPAFIFNPSNDAWF GSWGPPQHLAQARLRAIEEGLPVVRATPTGISAVIDADGRIVQSLPMHAAGRIDTIVPPAHEPTLFARFGNALPVGFALA LLALAIAFRRRGR
Sequences:
>Translated_573_residues MTATRSRIAALADRWPKSLALLLGAVSATGFAPLHLWPLTLLALGGWMAIVARSPRGWRAFGTGWAFGVGHFVVGLNWIA TAFTYQAAMPAWLGWIAVLLLALYLAVYPALAAWGAWLTQKIVAPAQGGGRRVTPATAAGGLSGDDGARPTAAPAFAGAT LSFVLAFAALWTLTEWLRSWVFTGFAWNPLVATTGDFLGLLRLIGSYGASATVILAAGYVLWVVGSGVERIRRKDSLPEP SPQSQLQQQLAAGAVIAGFLALVYLLPDHSSSPPAAADATPITVVQPNIGQQDKWEGSKADANFAKLARLTTPMDDTPRL ILWPEAAVPDYLEWGYPAIYYERSPAEARRRITDLMNAGDVMLLGALKLEMDEGGEVVGARNAVMTLHADGTLGPRYDKA HLVPYGEYLPMRPVLSAIGLSRLAPGDIDFWPGPGPRTIDLGAFGRIGLQICYEIIFSGQVVDRDHRPAFIFNPSNDAWF GSWGPPQHLAQARLRAIEEGLPVVRATPTGISAVIDADGRIVQSLPMHAAGRIDTIVPPAHEPTLFARFGNALPVGFALA LLALAIAFRRRGR >Mature_572_residues TATRSRIAALADRWPKSLALLLGAVSATGFAPLHLWPLTLLALGGWMAIVARSPRGWRAFGTGWAFGVGHFVVGLNWIAT AFTYQAAMPAWLGWIAVLLLALYLAVYPALAAWGAWLTQKIVAPAQGGGRRVTPATAAGGLSGDDGARPTAAPAFAGATL SFVLAFAALWTLTEWLRSWVFTGFAWNPLVATTGDFLGLLRLIGSYGASATVILAAGYVLWVVGSGVERIRRKDSLPEPS PQSQLQQQLAAGAVIAGFLALVYLLPDHSSSPPAAADATPITVVQPNIGQQDKWEGSKADANFAKLARLTTPMDDTPRLI LWPEAAVPDYLEWGYPAIYYERSPAEARRRITDLMNAGDVMLLGALKLEMDEGGEVVGARNAVMTLHADGTLGPRYDKAH LVPYGEYLPMRPVLSAIGLSRLAPGDIDFWPGPGPRTIDLGAFGRIGLQICYEIIFSGQVVDRDHRPAFIFNPSNDAWFG SWGPPQHLAQARLRAIEEGLPVVRATPTGISAVIDADGRIVQSLPMHAAGRIDTIVPPAHEPTLFARFGNALPVGFALAL LALAIAFRRRGR
Specific function: Transfers the fatty acyl group on membrane lipoproteins [H]
COG id: COG0815
COG function: function code M; Apolipoprotein N-acyltransferase
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 CN hydrolase domain [H]
Homologues:
Organism=Escherichia coli, GI1786878, Length=568, Percent_Identity=27.8169014084507, Blast_Score=154, Evalue=2e-38,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004563 - InterPro: IPR003010 [H]
Pfam domain/function: PF00795 CN_hydrolase [H]
EC number: 2.3.1.- [C]
Molecular weight: Translated: 61292; Mature: 61161
Theoretical pI: Translated: 9.33; Mature: 9.33
Prosite motif: PS50263 CN_HYDROLASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTATRSRIAALADRWPKSLALLLGAVSATGFAPLHLWPLTLLALGGWMAIVARSPRGWRA CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHEEEECCCCCCEE FGTGWAFGVGHFVVGLNWIATAFTYQAAMPAWLGWIAVLLLALYLAVYPALAAWGAWLTQ CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KIVAPAQGGGRRVTPATAAGGLSGDDGARPTAAPAFAGATLSFVLAFAALWTLTEWLRSW HHHCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH VFTGFAWNPLVATTGDFLGLLRLIGSYGASATVILAAGYVLWVVGSGVERIRRKDSLPEP HHCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHCCCCCC SPQSQLQQQLAAGAVIAGFLALVYLLPDHSSSPPAAADATPITVVQPNIGQQDKWEGSKA CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCC DANFAKLARLTTPMDDTPRLILWPEAAVPDYLEWGYPAIYYERSPAEARRRITDLMNAGD CCHHHHHHHHCCCCCCCCCEEECCCCCCCHHHHCCCCEEEEECCHHHHHHHHHHHHCCCC VMLLGALKLEMDEGGEVVGARNAVMTLHADGTLGPRYDKAHLVPYGEYLPMRPVLSAIGL EEEEEEEEEEECCCCCEEECCCEEEEEECCCCCCCCCCCCEECCCCCCCCHHHHHHHHHH SRLAPGDIDFWPGPGPRTIDLGAFGRIGLQICYEIIFSGQVVDRDHRPAFIFNPSNDAWF HHCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHCCCEECCCCCCEEEECCCCCCCC GSWGPPQHLAQARLRAIEEGLPVVRATPTGISAVIDADGRIVQSLPMHAAGRIDTIVPPA CCCCCHHHHHHHHHHHHHHCCCEEEECCCCCEEEECCCCHHHHHCCCCCCCCCCCCCCCC HEPTLFARFGNALPVGFALALLALAIAFRRRGR CCCCHHHHCCCCCHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TATRSRIAALADRWPKSLALLLGAVSATGFAPLHLWPLTLLALGGWMAIVARSPRGWRA CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHEEEECCCCCCEE FGTGWAFGVGHFVVGLNWIATAFTYQAAMPAWLGWIAVLLLALYLAVYPALAAWGAWLTQ CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KIVAPAQGGGRRVTPATAAGGLSGDDGARPTAAPAFAGATLSFVLAFAALWTLTEWLRSW HHHCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH VFTGFAWNPLVATTGDFLGLLRLIGSYGASATVILAAGYVLWVVGSGVERIRRKDSLPEP HHCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHCCCCCC SPQSQLQQQLAAGAVIAGFLALVYLLPDHSSSPPAAADATPITVVQPNIGQQDKWEGSKA CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCC DANFAKLARLTTPMDDTPRLILWPEAAVPDYLEWGYPAIYYERSPAEARRRITDLMNAGD CCHHHHHHHHCCCCCCCCCEEECCCCCCCHHHHCCCCEEEEECCHHHHHHHHHHHHCCCC VMLLGALKLEMDEGGEVVGARNAVMTLHADGTLGPRYDKAHLVPYGEYLPMRPVLSAIGL EEEEEEEEEEECCCCCEEECCCEEEEEECCCCCCCCCCCCEECCCCCCCCHHHHHHHHHH SRLAPGDIDFWPGPGPRTIDLGAFGRIGLQICYEIIFSGQVVDRDHRPAFIFNPSNDAWF HHCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHCCCEECCCCCCEEEECCCCCCCC GSWGPPQHLAQARLRAIEEGLPVVRATPTGISAVIDADGRIVQSLPMHAAGRIDTIVPPA CCCCCHHHHHHHHHHHHHHCCCEEEECCCCCEEEECCCCHHHHHCCCCCCCCCCCCCCCC HEPTLFARFGNALPVGFALALLALAIAFRRRGR CCCCHHHHCCCCCHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Transferases; Acyltransferases; Transferring groups other than amino-acyl groups [C]
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA