Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103488612

Identifier: 103488612

GI number: 103488612

Start: 3288943

End: 3289332

Strand: Direct

Name: 103488612

Synonym: Sala_3137

Alternate gene names: NA

Gene position: 3288943-3289332 (Clockwise)

Preceding gene: 103488611

Following gene: 103488613

Centisome position: 98.32

GC content: 63.08

Gene sequence:

>390_bases
GTGACGGCGAACGCCCCGCCGCCGCCGACGGTTGAGGTCAGCGTTACCGGGCTGCGCAGCGCCAGGGGGCAGTTGCTCGT
CTGCCTGACGACCCAGGCGAGCGCCTTTCCCGATTGCAGCAAGGACAAGGCTTCGGTGCGCATGGCGGTGAAAGCCGCCG
ATGCCGCGCGCTTCGACATCCATGCGCCCGCCACGGGCACCTATGCGATCGCGGTGGTCCATGACGAAAATGGCAACAAC
AAGATGGACAAGGCGATCTTCCTGCCCAGGGAAGGCTTCGGCTTTTCGCGCAATCCGACGATCACCGTTGGCCCGCCGAG
TTTCAAATCGGCCAGTTTTGCGGTCGCGGGCGACATGCACCAGTCGATCAGGATGAAATATATGCTCTAG

Upstream 100 bases:

>100_bases
CATCATGCCGTCTACCGGGGGAATTATGGACTTTATTTCCGTTTCTGGGATCGCGCGTGCGGCACGGACATCGGGCTTGG
CCGCTTTGATCCTGTGCGCC

Downstream 100 bases:

>100_bases
TGGCGCCCGCGCGCCGCCGCTAAGAGAGCGCGCGTGACCGCGACACGCTCCCGCATCGCCGCTTTGGCCGACCGCTGGCC
AAAGTCCCTCGCCCTGTTGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 129; Mature: 128

Protein sequence:

>129_residues
MTANAPPPPTVEVSVTGLRSARGQLLVCLTTQASAFPDCSKDKASVRMAVKAADAARFDIHAPATGTYAIAVVHDENGNN
KMDKAIFLPREGFGFSRNPTITVGPPSFKSASFAVAGDMHQSIRMKYML

Sequences:

>Translated_129_residues
MTANAPPPPTVEVSVTGLRSARGQLLVCLTTQASAFPDCSKDKASVRMAVKAADAARFDIHAPATGTYAIAVVHDENGNN
KMDKAIFLPREGFGFSRNPTITVGPPSFKSASFAVAGDMHQSIRMKYML
>Mature_128_residues
TANAPPPPTVEVSVTGLRSARGQLLVCLTTQASAFPDCSKDKASVRMAVKAADAARFDIHAPATGTYAIAVVHDENGNNK
MDKAIFLPREGFGFSRNPTITVGPPSFKSASFAVAGDMHQSIRMKYML

Specific function: Unknown

COG id: COG4704

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13713; Mature: 13582

Theoretical pI: Translated: 9.74; Mature: 9.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTANAPPPPTVEVSVTGLRSARGQLLVCLTTQASAFPDCSKDKASVRMAVKAADAARFDI
CCCCCCCCCEEEEEEEECCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEEEECCCEEEEE
HAPATGTYAIAVVHDENGNNKMDKAIFLPREGFGFSRNPTITVGPPSFKSASFAVAGDMH
ECCCCCCEEEEEEECCCCCCCCCEEEEECCCCCCCCCCCEEEECCCCCCCCEEEEECCCC
QSIRMKYML
CCEEEEECC
>Mature Secondary Structure 
TANAPPPPTVEVSVTGLRSARGQLLVCLTTQASAFPDCSKDKASVRMAVKAADAARFDI
CCCCCCCCEEEEEEEECCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEEEECCCEEEEE
HAPATGTYAIAVVHDENGNNKMDKAIFLPREGFGFSRNPTITVGPPSFKSASFAVAGDMH
ECCCCCCEEEEEEECCCCCCCCCEEEEECCCCCCCCCCCEEEECCCCCCCCEEEEECCCC
QSIRMKYML
CCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA