| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is nadR [C]
Identifier: 103488605
GI number: 103488605
Start: 3282829
End: 3283347
Strand: Reverse
Name: nadR [C]
Synonym: Sala_3130
Alternate gene names: 103488605
Gene position: 3283347-3282829 (Counterclockwise)
Preceding gene: 103488606
Following gene: 103488604
Centisome position: 98.15
GC content: 70.33
Gene sequence:
>519_bases ATGACCCGGCACATCTGCCTGCACGGCGCCGAAAGCACGGGCAAGTCGACGCTCGCCCCGCGGCTCGCGCTGCGGCTCGG CGGGCTGGTCGTCCCCGAATATGGGCGCACCTATGCCGAGGCGAATGGCACCAAGTTCGACGAGGTCGACCTGCTCGCCA TTTTCGACGGCCACCGCGCCGCGACCGCGGCGGCGCTGGCCCAGCAGCCCGACTGGCTGGTGTCCGACACCGACCCGCTG ATGACGCAGGCGTGGGCGCTCATGCTGCTGGGGCGCCGCTTGCCCGAAATCGATGCGTGGACCGGGGTGGCCGACCTCTA TCTCGTTCCCGCGATGGACCTGCCCTGGGAGGAGGACGGCACCCGCCTGTTCGGCAGCGATCTGGCGCGGCATCAGTTCA TGGACGTCGCGATCGGCGAACTCGAACGGCGCCAGCTCCCATGGGCGTGGATCGAGGGCGAGGGCGACGCCCGGATCGAC CATGCCGTCGCGGCGATTGCGGCGGCGGGGTTGATGTAG
Upstream 100 bases:
>100_bases GGCTTTACGCGACCAGCGCGGTCTATGTCGTGCTGCTCGGCCTGTCGATCGACGGGCTGATCCAGTGGCGCCGCGCGGCG GCGACCGGGCGGCTCGCGCC
Downstream 100 bases:
>100_bases GGTATCGGCGGCGGTTTTGGGGTGGAGAGCTGCCATAAAGCCCTCTCCCCTTCAGGGGAGAGGGTTGGGAGAGGGGGACC ATCCAAACCCCTCTCAACTG
Product: NAD metabolism ATPase/kinase-like protein
Products: NAD; pyrophosphate [C]
Alternate protein names: ATPase/Kinase Involved In NAD Metabolism-Like Protein
Number of amino acids: Translated: 172; Mature: 171
Protein sequence:
>172_residues MTRHICLHGAESTGKSTLAPRLALRLGGLVVPEYGRTYAEANGTKFDEVDLLAIFDGHRAATAAALAQQPDWLVSDTDPL MTQAWALMLLGRRLPEIDAWTGVADLYLVPAMDLPWEEDGTRLFGSDLARHQFMDVAIGELERRQLPWAWIEGEGDARID HAVAAIAAAGLM
Sequences:
>Translated_172_residues MTRHICLHGAESTGKSTLAPRLALRLGGLVVPEYGRTYAEANGTKFDEVDLLAIFDGHRAATAAALAQQPDWLVSDTDPL MTQAWALMLLGRRLPEIDAWTGVADLYLVPAMDLPWEEDGTRLFGSDLARHQFMDVAIGELERRQLPWAWIEGEGDARID HAVAAIAAAGLM >Mature_171_residues TRHICLHGAESTGKSTLAPRLALRLGGLVVPEYGRTYAEANGTKFDEVDLLAIFDGHRAATAAALAQQPDWLVSDTDPLM TQAWALMLLGRRLPEIDAWTGVADLYLVPAMDLPWEEDGTRLFGSDLARHQFMDVAIGELERRQLPWAWIEGEGDARIDH AVAAIAAAGLM
Specific function: NADr Is Bifunctional; It Interacts With Pnuc At Low Internal NAD Levels, Permitting Transport Of Nmn Intact Into The Cell. As NAD Levels Increase Within The Cell, The Affinity Of NADr For The Operator Regions Of NADa, NADb, And Pncb Increases, Repressing
COG id: COG3172
COG function: function code H; Predicted ATPase/kinase involved in NAD metabolism
Gene ontology:
Cell location: May Loosely Associate With The Membrane Through Its Interaction With The Membrane-Bound Pnuc [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18806; Mature: 18674
Theoretical pI: Translated: 4.50; Mature: 4.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRHICLHGAESTGKSTLAPRLALRLGGLVVPEYGRTYAEANGTKFDEVDLLAIFDGHRA CCCEEEEECCCCCCCHHHHHHHHHHHCCEEECCCCCEECCCCCCCCCCEEEEEEECCCHH ATAAALAQQPDWLVSDTDPLMTQAWALMLLGRRLPEIDAWTGVADLYLVPAMDLPWEEDG HHHHHHHCCCCEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHEEEECCCCCCCCCCC TRLFGSDLARHQFMDVAIGELERRQLPWAWIEGEGDARIDHAVAAIAAAGLM CEEHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHCCC >Mature Secondary Structure TRHICLHGAESTGKSTLAPRLALRLGGLVVPEYGRTYAEANGTKFDEVDLLAIFDGHRA CCEEEEECCCCCCCHHHHHHHHHHHCCEEECCCCCEECCCCCCCCCCEEEEEEECCCHH ATAAALAQQPDWLVSDTDPLMTQAWALMLLGRRLPEIDAWTGVADLYLVPAMDLPWEEDG HHHHHHHCCCCEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHEEEECCCCCCCCCCC TRLFGSDLARHQFMDVAIGELERRQLPWAWIEGEGDARIDHAVAAIAAAGLM CEEHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: nicotinamide nucleotide; ATP [C]
Specific reaction: nicotinamide nucleotide + ATP = NAD + pyrophosphate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA