| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is 103488604
Identifier: 103488604
GI number: 103488604
Start: 3282561
End: 3282812
Strand: Reverse
Name: 103488604
Synonym: Sala_3129
Alternate gene names: NA
Gene position: 3282812-3282561 (Counterclockwise)
Preceding gene: 103488605
Following gene: 103488603
Centisome position: 98.14
GC content: 63.89
Gene sequence:
>252_bases TTGGGGTGGAGAGCTGCCATAAAGCCCTCTCCCCTTCAGGGGAGAGGGTTGGGAGAGGGGGACCATCCAAACCCCTCTCA ACTGCGGCTAGGCAGCAAGCTGCCAAGCCTTCGTGTCTCTCCCCTGAAGGGGAGAGAGCCCGAAATGCCAACGGCCGCAA TCGGTCGCAACCAGCCATTCCCCTCTCAACACCGCAGCGCCCCCCGCTTTTCCACAACCACCGCCCGCCCCCGCTTGCTC CCGACTCCTTAG
Upstream 100 bases:
>100_bases CTCCCATGGGCGTGGATCGAGGGCGAGGGCGACGCCCGGATCGACCATGCCGTCGCGGCGATTGCGGCGGCGGGGTTGAT GTAGGGTATCGGCGGCGGTT
Downstream 100 bases:
>100_bases ATGGTTAAGGCCGATCCATGACCGCCACGCCGCCCGCCGTCCGCATTGCCCCGTCGATCCTCAGCGCCGATTTCGCGAAG CTGGGCGAGGAAGTGCGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 83; Mature: 82
Protein sequence:
>83_residues MGWRAAIKPSPLQGRGLGEGDHPNPSQLRLGSKLPSLRVSPLKGREPEMPTAAIGRNQPFPSQHRSAPRFSTTTARPRLL PTP
Sequences:
>Translated_83_residues MGWRAAIKPSPLQGRGLGEGDHPNPSQLRLGSKLPSLRVSPLKGREPEMPTAAIGRNQPFPSQHRSAPRFSTTTARPRLL PTP >Mature_82_residues GWRAAIKPSPLQGRGLGEGDHPNPSQLRLGSKLPSLRVSPLKGREPEMPTAAIGRNQPFPSQHRSAPRFSTTTARPRLLP TP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9014; Mature: 8882
Theoretical pI: Translated: 12.51; Mature: 12.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGWRAAIKPSPLQGRGLGEGDHPNPSQLRLGSKLPSLRVSPLKGREPEMPTAAIGRNQPF CCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PSQHRSAPRFSTTTARPRLLPTP CCCCCCCCCCCCCCCCCEECCCC >Mature Secondary Structure GWRAAIKPSPLQGRGLGEGDHPNPSQLRLGSKLPSLRVSPLKGREPEMPTAAIGRNQPF CCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PSQHRSAPRFSTTTARPRLLPTP CCCCCCCCCCCCCCCCCEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA