| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is pnuC [H]
Identifier: 103488606
GI number: 103488606
Start: 3283344
End: 3283913
Strand: Reverse
Name: pnuC [H]
Synonym: Sala_3131
Alternate gene names: 103488606
Gene position: 3283913-3283344 (Counterclockwise)
Preceding gene: 103488607
Following gene: 103488605
Centisome position: 98.17
GC content: 68.25
Gene sequence:
>570_bases ATGAACCCCGTCGAATGGGTTGCCGCCGCCTTCGTGCTCACCAATGTCGCGCTCGTCGCGCTGCGCAGCGTCTGGAACTA TCCCTTCGCGCTCGTCGCGGTGGCGCTCTATGCCTTCGTCTTCTTCGAGGCGAAGCTGTACAGCGACATGCTGCTCCAGG GCTTTTTCTTCGCGCTCAATCTTTATGGCTGGGCGGCGTGGACGCGCGCACGGACCGACAGCGGCGTCCCGGTCGGCTGG ATGGGCGACCGCGCGCGATGGGGCTGGGGGCTCGGCACGCTAGCCGCCTGGGCGGGATGGAGCTATGCGATGGACCGCCA CACCGACGCGGCGGCGCCATGGATCGACGGCGCGATCGCGATGATCAGCGTCACCGCGCAATGGCTGCTCGCGCGGCGGC GCGTCGAAAGCTGGTATCTGTGGATCCTCGTCGACCTGATCGCGATCCCGCTCTTCGCATCGCGCGGGCTTTACGCGACC AGCGCGGTCTATGTCGTGCTGCTCGGCCTGTCGATCGACGGGCTGATCCAGTGGCGCCGCGCGGCGGCGACCGGGCGGCT CGCGCCATGA
Upstream 100 bases:
>100_bases CGGTGCTCCGCCGCCCGCCAGAGCGACGGATCAGCCGCGAGGGGCTGTGGACGCGGCCCCGGCCGGACGGCGTACACACG CACGGGGAGTGCGCAGGCGC
Downstream 100 bases:
>100_bases CCCGGCACATCTGCCTGCACGGCGCCGAAAGCACGGGCAAGTCGACGCTCGCCCCGCGGCTCGCGCTGCGGCTCGGCGGG CTGGTCGTCCCCGAATATGG
Product: nicotinamide mononucleotide transporter
Products: nicotinamide nucleotide [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 189; Mature: 189
Protein sequence:
>189_residues MNPVEWVAAAFVLTNVALVALRSVWNYPFALVAVALYAFVFFEAKLYSDMLLQGFFFALNLYGWAAWTRARTDSGVPVGW MGDRARWGWGLGTLAAWAGWSYAMDRHTDAAAPWIDGAIAMISVTAQWLLARRRVESWYLWILVDLIAIPLFASRGLYAT SAVYVVLLGLSIDGLIQWRRAAATGRLAP
Sequences:
>Translated_189_residues MNPVEWVAAAFVLTNVALVALRSVWNYPFALVAVALYAFVFFEAKLYSDMLLQGFFFALNLYGWAAWTRARTDSGVPVGW MGDRARWGWGLGTLAAWAGWSYAMDRHTDAAAPWIDGAIAMISVTAQWLLARRRVESWYLWILVDLIAIPLFASRGLYAT SAVYVVLLGLSIDGLIQWRRAAATGRLAP >Mature_189_residues MNPVEWVAAAFVLTNVALVALRSVWNYPFALVAVALYAFVFFEAKLYSDMLLQGFFFALNLYGWAAWTRARTDSGVPVGW MGDRARWGWGLGTLAAWAGWSYAMDRHTDAAAPWIDGAIAMISVTAQWLLARRRVESWYLWILVDLIAIPLFASRGLYAT SAVYVVLLGLSIDGLIQWRRAAATGRLAP
Specific function: Required for nicotinamide riboside transport across the inner membrane [H]
COG id: COG3201
COG function: function code H; Nicotinamide mononucleotide transporter
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the nicotinamide ribonucleoside (NR) uptake permease (TC 4.B.1) family [H]
Homologues:
Organism=Escherichia coli, GI1786965, Length=205, Percent_Identity=28.2926829268293, Blast_Score=90, Evalue=8e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006419 [H]
Pfam domain/function: PF04973 NMN_transporter [H]
EC number: NA
Molecular weight: Translated: 21053; Mature: 21053
Theoretical pI: Translated: 9.62; Mature: 9.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNPVEWVAAAFVLTNVALVALRSVWNYPFALVAVALYAFVFFEAKLYSDMLLQGFFFALN CCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LYGWAAWTRARTDSGVPVGWMGDRARWGWGLGTLAAWAGWSYAMDRHTDAAAPWIDGAIA HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCHHHHHHCCCCCCCCHHHHHHH MISVTAQWLLARRRVESWYLWILVDLIAIPLFASRGLYATSAVYVVLLGLSIDGLIQWRR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHH AAATGRLAP HHCCCCCCC >Mature Secondary Structure MNPVEWVAAAFVLTNVALVALRSVWNYPFALVAVALYAFVFFEAKLYSDMLLQGFFFALN CCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LYGWAAWTRARTDSGVPVGWMGDRARWGWGLGTLAAWAGWSYAMDRHTDAAAPWIDGAIA HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCHHHHHHCCCCCCCCHHHHHHH MISVTAQWLLARRRVESWYLWILVDLIAIPLFASRGLYATSAVYVVLLGLSIDGLIQWRR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHH AAATGRLAP HHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: nicotinamide nucleotide [Periplasm] [C]
Specific reaction: nicotinamide nucleotide [Periplasm] = nicotinamide nucleotide [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8905232; 9278503; 2841129; 2198247 [H]