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The map label for this gene is ybaW [C]

Identifier: 103488540

GI number: 103488540

Start: 3215066

End: 3215476

Strand: Direct

Name: ybaW [C]

Synonym: Sala_3064

Alternate gene names: 103488540

Gene position: 3215066-3215476 (Clockwise)

Preceding gene: 103488539

Following gene: 103488553

Centisome position: 96.11

GC content: 64.48

Gene sequence:

>411_bases
ATGGCGACAGCCTCGCTCCCGCACGATCATCCCATTGCCGTCGGCGCCGACGCCATCGACTTCATGGGGCATGTGAACAA
CGCCCATTATCTGAGCTGGGTTCAGGATGCGGTCCTGTCGCACTGGCGCAAGATCGCGCCGCCCGAAGCCGTGGCCGCGC
ACCTGTGGGTCGCGCTCAAGCATGAAATCACCTATCGCCGCCCGGCCTTTCTCGACGATCAGGTCATCGCGACGGTCATC
CTCGAAAAGGTGCAGGGCGCGCGCGCCTTTTACGAAACGGTGATCCGCCGCGGCGAGGAAGTGCTGGCCGAGGTCAAATC
GAGCTGGTGCTGCATCGACGCCGAAACGCTGCGCCCCGCGCGGCTGGCAAGCGACGTGATCGCGCGCTTTTTTCCCGGCG
AAAAGGGCTGA

Upstream 100 bases:

>100_bases
TGCCGGACTGTGGCTCCCCGACCAGGGCGTCGCGCCCTATCGCGGGCGGGGGTGATATTTCATCTTTCCGTCACATTTTG
TTGACACTAGTGTAAACGAT

Downstream 100 bases:

>100_bases
GGCCGACGCCTTAGAGCGCGATGACCTGATATTGATCCACCGTGACGGAGGCGATTTTGGCCGAGTGCGAGGCGCGAGGA
GCGGCGCGATGCGGGACATC

Product: thioesterase superfamily protein

Products: NA

Alternate protein names: Thioesterase; 4-Hydroxybenzoyl-CoA Thioesterase Domain Protein; Acyl-ACP Thioesterase; Thioesterase-Like; Thioesterase Family Protein

Number of amino acids: Translated: 136; Mature: 135

Protein sequence:

>136_residues
MATASLPHDHPIAVGADAIDFMGHVNNAHYLSWVQDAVLSHWRKIAPPEAVAAHLWVALKHEITYRRPAFLDDQVIATVI
LEKVQGARAFYETVIRRGEEVLAEVKSSWCCIDAETLRPARLASDVIARFFPGEKG

Sequences:

>Translated_136_residues
MATASLPHDHPIAVGADAIDFMGHVNNAHYLSWVQDAVLSHWRKIAPPEAVAAHLWVALKHEITYRRPAFLDDQVIATVI
LEKVQGARAFYETVIRRGEEVLAEVKSSWCCIDAETLRPARLASDVIARFFPGEKG
>Mature_135_residues
ATASLPHDHPIAVGADAIDFMGHVNNAHYLSWVQDAVLSHWRKIAPPEAVAAHLWVALKHEITYRRPAFLDDQVIATVIL
EKVQGARAFYETVIRRGEEVLAEVKSSWCCIDAETLRPARLASDVIARFFPGEKG

Specific function: Unknown

COG id: COG0824

COG function: function code R; Predicted thioesterase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15140; Mature: 15009

Theoretical pI: Translated: 6.63; Mature: 6.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATASLPHDHPIAVGADAIDFMGHVNNAHYLSWVQDAVLSHWRKIAPPEAVAAHLWVALK
CCCCCCCCCCCEECCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
HEITYRRPAFLDDQVIATVILEKVQGARAFYETVIRRGEEVLAEVKSSWCCIDAETLRPA
HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECCHHHCCHH
RLASDVIARFFPGEKG
HHHHHHHHHHCCCCCC
>Mature Secondary Structure 
ATASLPHDHPIAVGADAIDFMGHVNNAHYLSWVQDAVLSHWRKIAPPEAVAAHLWVALK
CCCCCCCCCCEECCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
HEITYRRPAFLDDQVIATVILEKVQGARAFYETVIRRGEEVLAEVKSSWCCIDAETLRPA
HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECCHHHCCHH
RLASDVIARFFPGEKG
HHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA